RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 TTC13Q8NBP0 860 aa4.03□□□□□ -1.76
PTPRC-203ENST00000367367 PARP3Q9Y6F1 533 aa4.03□□□□□ -1.76
PTPRC-203ENST00000367367 PCNTO95613 3336 aa4.03□□□□□ -1.76
PTPRC-203ENST00000367367 FAM177BA6PVY3 158 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.02□□□□□ -1.77
PTPRC-203ENST00000367367 HMGB1P09429 215 aaKnown RBP4.02□□□□□ -1.77
PTPRC-203ENST00000367367 HOXB7P09629 217 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 GPTP24298 496 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 TM4SF1P30408 202 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 TWISTNBQ3B726 338 aaPredicted RBP4.02□□□□□ -1.77
PTPRC-203ENST00000367367 KIF6Q6ZMV9 814 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 COPS6Q7L5N1 327 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 XAGE3Q8WTP9 111 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 CDCA7LQ96GN5 454 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 BCL2L13Q9BXK5 485 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 HPS5Q9UPZ3 1129 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 IL16Q14005 1332 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 ERBB4Q15303 1308 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 MAP3K15Q6ZN16 1313 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 TIAM2Q8IVF5 1701 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 SERPINB2P05120 415 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 HNRNPUQ00839 825 aaKnown RBP eCLIP4.02□□□□□ -1.77
PTPRC-203ENST00000367367 EXOSC9Q06265 439 aaKnown RBP4.02□□□□□ -1.77
PTPRC-203ENST00000367367 PRR5LQ6MZQ0 368 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 WDR63Q8IWG1 891 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 DEPDC4Q8N2C3 294 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 ADAM33Q9BZ11 813 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 PHAXQ9H814 394 aaKnown RBP4.02□□□□□ -1.77
PTPRC-203ENST00000367367 DDX21Q9NR30 783 aaKnown RBP eCLIP4.02□□□□□ -1.77
PTPRC-203ENST00000367367 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.02□□□□□ -1.77
PTPRC-203ENST00000367367 RNF19AQ9NV58 838 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 DBF4Q9UBU7 674 aaPredicted RBP4.02□□□□□ -1.77
PTPRC-203ENST00000367367 NIP7Q9Y221 180 aaKnown RBP eCLIP4.02□□□□□ -1.77
PTPRC-203ENST00000367367 ZNF652Q9Y2D9 606 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 UBN2Q6ZU65 1347 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 ATP10DQ9P241 1426 aa4.02□□□□□ -1.77
PTPRC-203ENST00000367367 A0A0G2JLW4 131 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 ANKRD33BA6NCL7 494 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 NPHP1O15259 732 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 DGAT1O75907 488 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 YBX3P16989 372 aaKnown RBP eCLIP4.01□□□□□ -1.772e-7■■□□□ 13.3
PTPRC-203ENST00000367367 CHRNA5P30532 468 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 ECM1Q16610 540 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 CLEC4GQ6UXB4 293 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 NUTM1Q86Y26 1132 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 CNBD1Q8NA66 436 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 SPATA32Q96LK8 384 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 SETDB2Q96T68 719 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 TSR3Q9UJK0 312 aaKnown RBP4.01□□□□□ -1.77
PTPRC-203ENST00000367367 CD2APQ9Y5K6 639 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 ABCC12Q96J65 1359 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 COL4A1P02462 1669 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 A0A1B0GUL6 1792 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 SOWAHDA6NJG2 315 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 PPP1R3GB7ZBB8 358 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 CFAP99D6REC4 459 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 DPEP1P16444 411 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 CCDC30Q5VVM6 783 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 G2E3Q7L622 706 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 LAPTM4BQ86VI4 370 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 NBPF5PQ86XG9 351 aaPredicted RBP4.01□□□□□ -1.77
PTPRC-203ENST00000367367 MYH16Q9H6N6 1097 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 NDUFB9Q9Y6M9 179 aa4.01□□□□□ -1.77
PTPRC-203ENST00000367367 CEP350Q5VT06 3117 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 ERVV-1B6SEH8 477 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 PATL2C9JE40 543 aaKnown RBP4□□□□□ -1.77
PTPRC-203ENST00000367367 ATP5J2-PTCD1G3V325 749 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 ST8SIA5O15466 376 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 KDM4AO75164 1064 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 VAMP4O75379 141 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 LGR5O75473 907 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 SLFN5Q08AF3 891 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 NFX1Q12986 1120 aaKnown RBP4□□□□□ -1.77
PTPRC-203ENST00000367367 GPR162Q16538 588 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 TJAP1Q5JTD0 557 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 CAPN12Q6ZSI9 719 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 FBXO33Q7Z6M2 555 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 FAM174AQ8TBP5 190 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 STK31Q9BXU1 1019 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 HYPKQ9NX55 129 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 SEPT9Q9UHD8 586 aaPredicted RBP4□□□□□ -1.77
PTPRC-203ENST00000367367 LRRC37AA6NMS7 1700 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 ADCY9O60503 1353 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 RCCD1A6NED2 376 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 KCNA3P22001 575 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 ST5P78524 1137 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 SUSD4Q5VX71 490 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 TRIM67Q6ZTA4 783 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 ZNF34Q8IZ26 560 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 SYNE4Q8N205 404 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 PLBD2Q8NHP8 589 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 SYMPKQ92797 1274 aaKnown RBP4□□□□□ -1.77
PTPRC-203ENST00000367367 ZDHHC16Q969W1 377 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 CDKN2AIPQ9NXV6 580 aaPredicted RBP4□□□□□ -1.77
PTPRC-203ENST00000367367 BCS1LQ9Y276 419 aa4□□□□□ -1.77
PTPRC-203ENST00000367367 IBTKQ9P2D0 1353 aaPredicted RBP3.99□□□□□ -1.77
PTPRC-203ENST00000367367 MYH13Q9UKX3 1938 aa3.99□□□□□ -1.77
PTPRC-203ENST00000367367 PI4KAP2A4QPH2 592 aa3.99□□□□□ -1.77
PTPRC-203ENST00000367367 FAM187AA6NFU0 413 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms