RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 BAG1Q99933 345 aaPredicted RBP18.84■□□□□ 0.61
NID1-202ENST00000366595 B4DLN1 442 aa18.84■□□□□ 0.61
NID1-202ENST00000366595 MGEA5O60502 916 aa18.84■□□□□ 0.61
NID1-202ENST00000366595 MRPL12P52815 198 aaKnown RBP18.84■□□□□ 0.61
NID1-202ENST00000366595 RTL9Q8NET4 1388 aa18.84■□□□□ 0.61
NID1-202ENST00000366595 GOLGA6CA6NDK9 693 aa18.84■□□□□ 0.61
NID1-202ENST00000366595 GOLGA6DP0CG33 693 aa18.84■□□□□ 0.61
NID1-202ENST00000366595 MAP3K21Q5TCX8 1036 aa18.84■□□□□ 0.61
NID1-202ENST00000366595 IFT20Q8IY31 132 aa18.84■□□□□ 0.61
NID1-202ENST00000366595 EPSTI1Q96J88 318 aa18.84■□□□□ 0.61
NID1-202ENST00000366595 GOLGA6AQ9NYA3 693 aa18.84■□□□□ 0.61
NID1-202ENST00000366595 CRCPO75575 148 aa18.83■□□□□ 0.61
NID1-202ENST00000366595 NCBP1Q09161 790 aaKnown RBP18.83■□□□□ 0.61
NID1-202ENST00000366595 HAND2P61296 217 aa18.83■□□□□ 0.61
NID1-202ENST00000366595 CYB5RLQ6IPT4 315 aa18.83■□□□□ 0.61
NID1-202ENST00000366595 C8orf74Q6P047 294 aa18.83■□□□□ 0.61
NID1-202ENST00000366595 LDHAL6AQ6ZMR3 332 aa18.83■□□□□ 0.61
NID1-202ENST00000366595 VSIG1Q86XK7 387 aa18.83■□□□□ 0.61
NID1-202ENST00000366595 ZGPATQ8N5A5 531 aaKnown RBP18.83■□□□□ 0.61
NID1-202ENST00000366595 MAK16Q9BXY0 300 aaKnown RBP18.83■□□□□ 0.61
NID1-202ENST00000366595 C20orf194Q5TEA3 1177 aa18.83■□□□□ 0.6
NID1-202ENST00000366595 OSCARQ8IYS5 282 aa18.83■□□□□ 0.6
NID1-202ENST00000366595 DHX58Q96C10 678 aa18.83■□□□□ 0.6
NID1-202ENST00000366595 NUCB1Q02818 461 aa18.83■□□□□ 0.6
NID1-202ENST00000366595 GAPVD1Q14C86 1478 aa18.83■□□□□ 0.6
NID1-202ENST00000366595 PFDN4Q9NQP4 134 aa18.83■□□□□ 0.6
NID1-202ENST00000366595 IFNKQ9P0W0 207 aa18.83■□□□□ 0.6
NID1-202ENST00000366595 TTC36A6NLP5 189 aa18.82■□□□□ 0.6
NID1-202ENST00000366595 RASSF2P50749 326 aa18.82■□□□□ 0.6
NID1-202ENST00000366595 MYL5Q02045 173 aa18.82■□□□□ 0.6
NID1-202ENST00000366595 C9orf84Q5VXU9 1444 aa18.82■□□□□ 0.6
NID1-202ENST00000366595 PPFIA4O75335 1185 aa18.82■□□□□ 0.6
NID1-202ENST00000366595 ARID5AQ03989 594 aa18.82■□□□□ 0.6
NID1-202ENST00000366595 MIS18AQ9NYP9 233 aa18.82■□□□□ 0.6
NID1-202ENST00000366595 F6X3S4 739 aa18.82■□□□□ 0.6
NID1-202ENST00000366595 CETN3O15182 167 aa18.82■□□□□ 0.6
NID1-202ENST00000366595 WHAMMP3Q1A5X7 153 aa18.82■□□□□ 0.6
NID1-202ENST00000366595 IQUBQ8NA54 791 aa18.82■□□□□ 0.6
NID1-202ENST00000366595 FAM204AQ9H8W3 233 aa18.82■□□□□ 0.6
NID1-202ENST00000366595 TSPY3P0CV98 308 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 TSPY8P0CW00 308 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 MTMR3Q13615 1198 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 INTS4Q96HW7 963 aaKnown RBP18.81■□□□□ 0.6
NID1-202ENST00000366595 UTP11Q9Y3A2 253 aaKnown RBP18.81■□□□□ 0.6
NID1-202ENST00000366595 PPFIA1Q13136 1202 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 RILPL1Q5EBL4 403 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 KIFAP3Q92845 792 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 GTF3C6Q969F1 213 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
NID1-202ENST00000366595 CABS1Q96KC9 395 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 PLCB1Q9NQ66 1216 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 ERICH3Q5RHP9 1530 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 PRIM1P49642 420 aaKnown RBP18.81■□□□□ 0.6
NID1-202ENST00000366595 SATB1Q01826 763 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 FANCD2Q9BXW9 1451 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 LGSNQ5TDP6 509 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 RNF10Q8N5U6 811 aaKnown RBP18.81■□□□□ 0.6
NID1-202ENST00000366595 PRPF31Q8WWY3 499 aaKnown RBP18.81■□□□□ 0.6
NID1-202ENST00000366595 ESYT1Q9BSJ8 1104 aa18.81■□□□□ 0.6
NID1-202ENST00000366595 THUMPD2Q9BTF0 503 aaKnown RBP18.81■□□□□ 0.6
NID1-202ENST00000366595 RAB11FIP4Q86YS3 637 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 NECAB1Q8N987 351 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 ARHGEF2Q92974 986 aaKnown RBP18.8■□□□□ 0.6
NID1-202ENST00000366595 TCHPQ9BT92 498 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 NSD2O96028 1365 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 PTCD1O75127 700 aaKnown RBP18.8■□□□□ 0.6
NID1-202ENST00000366595 PPFIA2O75334 1257 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 PPP1R42Q7Z4L9 355 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 STX8Q9UNK0 236 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 DNM1Q05193 864 aaKnown RBP18.8■□□□□ 0.6
NID1-202ENST00000366595 RHPN1Q8TCX5 695 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 RBM8AQ9Y5S9 174 aaKnown RBP18.8■□□□□ 0.6
NID1-202ENST00000366595 IGF1RP08069 1367 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 NAPAP54920 295 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 MCMDC2Q4G0Z9 681 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 HSP90AA4PQ58FG1 418 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 NBPF6Q5VWK0 638 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 NBPF4Q96M43 638 aa18.8■□□□□ 0.6
NID1-202ENST00000366595 LEO1Q8WVC0 666 aaPredicted RBP18.79■□□□□ 0.6
NID1-202ENST00000366595 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.79■□□□□ 0.6
NID1-202ENST00000366595 HPDP32754 393 aaPredicted RBP18.79■□□□□ 0.6
NID1-202ENST00000366595 GIPC1O14908 333 aa18.79■□□□□ 0.6
NID1-202ENST00000366595 GEN1Q17RS7 908 aa18.79■□□□□ 0.6
NID1-202ENST00000366595 HEATR3Q7Z4Q2 680 aa18.79■□□□□ 0.6
NID1-202ENST00000366595 TTC16Q8NEE8 873 aa18.79■□□□□ 0.6
NID1-202ENST00000366595 RUSC2Q8N2Y8 1516 aa18.79■□□□□ 0.6
NID1-202ENST00000366595 MARCKSP29966 332 aaPredicted RBP18.79■□□□□ 0.6
NID1-202ENST00000366595 KRT2P35908 639 aa18.79■□□□□ 0.6
NID1-202ENST00000366595 RAB3GAP1Q15042 981 aa18.79■□□□□ 0.6
NID1-202ENST00000366595 PHLDB3Q6NSJ2 640 aa18.79■□□□□ 0.6
NID1-202ENST00000366595 ZNF365Q70YC5 407 aa18.79■□□□□ 0.6
NID1-202ENST00000366595 SPATS2Q86XZ4 545 aaKnown RBP18.79■□□□□ 0.6
NID1-202ENST00000366595 SMC5Q8IY18 1101 aa18.79■□□□□ 0.6
NID1-202ENST00000366595 UBL4BQ8N7F7 174 aa18.79■□□□□ 0.6
NID1-202ENST00000366595 TSKSQ9UJT2 592 aa18.79■□□□□ 0.6
NID1-202ENST00000366595 TTC21BQ7Z4L5 1316 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 ZNF131P52739 623 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 TTLL12Q14166 644 aaPredicted RBP18.78■□□□□ 0.6
NID1-202ENST00000366595 SRGAP1Q7Z6B7 1085 aa18.78■□□□□ 0.6
NID1-202ENST00000366595 CCDC117Q8IWD4 279 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms