RNA–Protein interactions for RNA: ENST00000366497.6

NLRP3-204, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-204ENST00000366497 MAGEC2Q9UBF1 373 aaPredicted RBP10.29□□□□□ -0.76
NLRP3-204ENST00000366497 SEC63Q9UGP8 760 aaKnown RBP10.29□□□□□ -0.76
NLRP3-204ENST00000366497 CCNL1Q9UK58 526 aaPredicted RBP10.29□□□□□ -0.76
NLRP3-204ENST00000366497 MAP3K15Q6ZN16 1313 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 KIF5BP33176 963 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 ST5P78524 1137 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 RBM10P98175 930 aaKnown RBP10.28□□□□□ -0.76
NLRP3-204ENST00000366497 STIM1Q13586 685 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 ANO6Q4KMQ2 910 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 EPHA10Q5JZY3 1008 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 SLF2Q8IX21 1173 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 CRACR2BQ8N4Y2 399 aaPredicted RBP10.28□□□□□ -0.76
NLRP3-204ENST00000366497 FAM200AQ8TCP9 573 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 MAP4K1Q92918 833 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 ZKSCAN3Q9BRR0 538 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 CCDC194A0A1B0GVG4 234 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 GADD45BO75293 160 aaPredicted RBP10.28□□□□□ -0.76
NLRP3-204ENST00000366497 PPFIBP1Q86W92 1011 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 ARMT1Q9H993 441 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 PIGBQ92521 554 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 RBSNQ9H1K0 784 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 GREM2Q9H772 168 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 NCAPD2Q15021 1401 aa10.28□□□□□ -0.76
NLRP3-204ENST00000366497 SPTLC2O15270 562 aa10.27□□□□□ -0.76
NLRP3-204ENST00000366497 KRT18P05783 430 aaKnown RBP10.27□□□□□ -0.76
NLRP3-204ENST00000366497 SYKP43405 635 aa10.27□□□□□ -0.76
NLRP3-204ENST00000366497 CCDC102BQ68D86 513 aa10.27□□□□□ -0.76
NLRP3-204ENST00000366497 DSCC1Q9BVC3 393 aa10.27□□□□□ -0.76
NLRP3-204ENST00000366497 TPCN1Q9ULQ1 816 aa10.27□□□□□ -0.76
NLRP3-204ENST00000366497 ZNF532Q9HCE3 1301 aa10.27□□□□□ -0.77
NLRP3-204ENST00000366497 E7EWF7 191 aa10.27□□□□□ -0.77
NLRP3-204ENST00000366497 CAVIN2O95810 425 aa10.27□□□□□ -0.77
NLRP3-204ENST00000366497 SSBP05455 408 aaKnown RBP eCLIP10.27□□□□□ -0.77
NLRP3-204ENST00000366497 MTX1Q13505 466 aa10.27□□□□□ -0.77
NLRP3-204ENST00000366497 CDC37L1Q7L3B6 337 aa10.27□□□□□ -0.77
NLRP3-204ENST00000366497 DNAJC25Q9H1X3 360 aa10.27□□□□□ -0.77
NLRP3-204ENST00000366497 VAT1LQ9HCJ6 419 aa10.27□□□□□ -0.77
NLRP3-204ENST00000366497 SFPQP23246 707 aaKnown RBP eCLIP10.27□□□□□ -0.77
NLRP3-204ENST00000366497 TYRO3Q06418 890 aa10.27□□□□□ -0.77
NLRP3-204ENST00000366497 FAM177A1Q8N128 213 aaPredicted RBP10.27□□□□□ -0.77
NLRP3-204ENST00000366497 LOC102724428A0A0B4J2F2 783 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 HSPD1P10809 573 aaKnown RBP10.26□□□□□ -0.77
NLRP3-204ENST00000366497 SIK1P57059 783 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 DHX8Q14562 1220 aaKnown RBP10.26□□□□□ -0.77
NLRP3-204ENST00000366497 TRAPPC3LQ5T215 181 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 OTUD7BQ6GQQ9 843 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 ZNF589Q86UQ0 364 aaPredicted RBP10.26□□□□□ -0.77
NLRP3-204ENST00000366497 SMARCE1Q969G3 411 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 ZNF830Q96NB3 372 aaPredicted RBP10.26□□□□□ -0.77
NLRP3-204ENST00000366497 ZHX3Q9H4I2 956 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 MCM9Q9NXL9 1143 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 ANGEL1Q9UNK9 670 aaKnown RBP10.26□□□□□ -0.77
NLRP3-204ENST00000366497 MROH5Q6ZUA9 1318 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 UQCRHLA0A096LP55 91 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 UQCRHP07919 91 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 ADORA1P30542 326 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 SPATA5Q8NB90 893 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 CCDC112Q8NEF3 446 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 TMEM63CQ9P1W3 806 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 C1orf167Q5SNV9 1468 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 ZNF622Q969S3 477 aaKnown RBP eCLIP10.26□□□□□ -0.77
NLRP3-204ENST00000366497 LLPHQ9BRT6 129 aaKnown RBP10.26□□□□□ -0.77
NLRP3-204ENST00000366497 ANKRD2Q9GZV1 360 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 CCP110O43303 1012 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 GSTO1P78417 241 aa10.26□□□□□ -0.77
NLRP3-204ENST00000366497 ADCY9O60503 1353 aa10.25□□□□□ -0.77
NLRP3-204ENST00000366497 F8W031 263 aaPredicted RBP10.25□□□□□ -0.77
NLRP3-204ENST00000366497 EPS15P42566 896 aa10.25□□□□□ -0.77
NLRP3-204ENST00000366497 ZNF445P59923 1031 aa10.25□□□□□ -0.77
NLRP3-204ENST00000366497 TMOD2Q9NZR1 351 aa10.25□□□□□ -0.77
NLRP3-204ENST00000366497 DENND2AQ9ULE3 1009 aa10.25□□□□□ -0.77
NLRP3-204ENST00000366497 RGS12O14924 1447 aa10.25□□□□□ -0.77
NLRP3-204ENST00000366497 ARHGEF28Q8N1W1 1705 aaKnown RBP10.25□□□□□ -0.77
NLRP3-204ENST00000366497 NAP1L1P55209 391 aaKnown RBP10.25□□□□□ -0.77
NLRP3-204ENST00000366497 CCDC96Q2M329 555 aa10.25□□□□□ -0.77
NLRP3-204ENST00000366497 NOC3LQ8WTT2 800 aaKnown RBP10.25□□□□□ -0.77
NLRP3-204ENST00000366497 FBXO3Q9UK99 471 aa10.25□□□□□ -0.77
NLRP3-204ENST00000366497 NRKQ7Z2Y5 1582 aa10.25□□□□□ -0.77
NLRP3-204ENST00000366497 TSPY3P0CV98 308 aa10.25□□□□□ -0.77
NLRP3-204ENST00000366497 TSPY8P0CW00 308 aa10.25□□□□□ -0.77
NLRP3-204ENST00000366497 DIP2AQ14689 1571 aa10.25□□□□□ -0.77
NLRP3-204ENST00000366497 PRDM1O75626 825 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 OFD1O75665 1012 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 PDE8BO95263 885 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 IL6STP40189 918 aaPredicted RBP10.24□□□□□ -0.77
NLRP3-204ENST00000366497 ZNF804AQ7Z570 1209 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 CNBD1Q8NA66 436 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 GTF3C6Q969F1 213 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 TMEM87BQ96K49 555 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 GPR108Q9NPR9 543 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 COL3A1P02461 1466 aaPredicted RBP10.24□□□□□ -0.77
NLRP3-204ENST00000366497 H7C1W4 665 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 CYP21A2P08686 494 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 HIBADHP31937 336 aaKnown RBP10.24□□□□□ -0.77
NLRP3-204ENST00000366497 CUL4AQ13619 759 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 BRAPQ7Z569 592 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 TFCP2L1Q9NZI6 479 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 FGAP02671 866 aa10.24□□□□□ -0.77
NLRP3-204ENST00000366497 LDHBP07195 334 aaKnown RBP10.24□□□□□ -0.77
NLRP3-204ENST00000366497 CRKLP46109 303 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms