RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 PCNTO95613 3336 aa8.34□□□□□ -1.07
CCDC196-201ENST00000359454 CELF2O95319 508 aaKnown RBP8.34□□□□□ -1.07
CCDC196-201ENST00000359454 CFHP08603 1231 aa8.34□□□□□ -1.07
CCDC196-201ENST00000359454 EIF4A1P60842 406 aaKnown RBP8.34□□□□□ -1.07
CCDC196-201ENST00000359454 CXCL9Q07325 125 aa8.34□□□□□ -1.07
CCDC196-201ENST00000359454 DIXDC1Q155Q3 683 aa8.34□□□□□ -1.07
CCDC196-201ENST00000359454 AOC3Q16853 763 aa8.34□□□□□ -1.07
CCDC196-201ENST00000359454 SLC10A5Q5PT55 438 aa8.34□□□□□ -1.07
CCDC196-201ENST00000359454 SAPCD2Q86UD0 394 aa8.34□□□□□ -1.07
CCDC196-201ENST00000359454 RTFDC1Q9BY42 306 aaPredicted RBP8.34□□□□□ -1.07
CCDC196-201ENST00000359454 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
CCDC196-201ENST00000359454 PGAP2Q9UHJ9 254 aa8.34□□□□□ -1.07
CCDC196-201ENST00000359454 HPS5Q9UPZ3 1129 aa8.34□□□□□ -1.07
CCDC196-201ENST00000359454 BBOX1O75936 387 aa8.33□□□□□ -1.08
CCDC196-201ENST00000359454 GCGRP47871 477 aa8.33□□□□□ -1.08
CCDC196-201ENST00000359454 GMPSP49915 693 aaPredicted RBP8.33□□□□□ -1.08
CCDC196-201ENST00000359454 TNIP1Q15025 636 aa8.33□□□□□ -1.08
CCDC196-201ENST00000359454 CIAPIN1Q6FI81 312 aa8.33□□□□□ -1.08
CCDC196-201ENST00000359454 DPP8Q6V1X1 898 aaPredicted RBP8.33□□□□□ -1.08
CCDC196-201ENST00000359454 SLC51AQ86UW1 340 aa8.33□□□□□ -1.08
CCDC196-201ENST00000359454 SP8Q8IXZ3 490 aa8.33□□□□□ -1.08
CCDC196-201ENST00000359454 KCTD12Q96CX2 325 aaKnown RBP8.33□□□□□ -1.08
CCDC196-201ENST00000359454 UTP14AQ9BVJ6 771 aaKnown RBP8.33□□□□□ -1.08
CCDC196-201ENST00000359454 BCL2L13Q9BXK5 485 aa8.33□□□□□ -1.08
CCDC196-201ENST00000359454 GLIS2Q9BZE0 524 aaPredicted RBP8.33□□□□□ -1.08
CCDC196-201ENST00000359454 MCOLN1Q9GZU1 580 aa8.33□□□□□ -1.08
CCDC196-201ENST00000359454 KDM3BQ7LBC6 1761 aa8.33□□□□□ -1.08
CCDC196-201ENST00000359454 ABCC4O15439 1325 aa8.32□□□□□ -1.08
CCDC196-201ENST00000359454 KDM4AO75164 1064 aa8.32□□□□□ -1.08
CCDC196-201ENST00000359454 PPP4CP60510 307 aa8.32□□□□□ -1.08
CCDC196-201ENST00000359454 KIAA2012Q0VF49 1180 aa8.32□□□□□ -1.08
CCDC196-201ENST00000359454 KMT5BQ4FZB7 885 aa8.32□□□□□ -1.08
CCDC196-201ENST00000359454 SH3D19Q5HYK7 790 aa8.32□□□□□ -1.08
CCDC196-201ENST00000359454 CDC37L1Q7L3B6 337 aa8.32□□□□□ -1.08
CCDC196-201ENST00000359454 MPNDQ8N594 471 aa8.32□□□□□ -1.08
CCDC196-201ENST00000359454 SPIRE2Q8WWL2 714 aa8.32□□□□□ -1.08
CCDC196-201ENST00000359454 PODXL2Q9NZ53 605 aa8.32□□□□□ -1.08
CCDC196-201ENST00000359454 TSR3Q9UJK0 312 aaKnown RBP8.32□□□□□ -1.08
CCDC196-201ENST00000359454 H7C1D1 291 aa8.31□□□□□ -1.08
CCDC196-201ENST00000359454 HIRAP54198 1017 aaPredicted RBP8.31□□□□□ -1.08
CCDC196-201ENST00000359454 NOGQ13253 232 aa8.31□□□□□ -1.08
CCDC196-201ENST00000359454 DGKZQ13574 1117 aa8.31□□□□□ -1.08
CCDC196-201ENST00000359454 NFE2L2Q16236 605 aa8.31□□□□□ -1.08
CCDC196-201ENST00000359454 MYSM1Q5VVJ2 828 aa8.31□□□□□ -1.08
CCDC196-201ENST00000359454 THSD4Q6ZMP0 1018 aa8.31□□□□□ -1.08
CCDC196-201ENST00000359454 DDX46Q7L014 1031 aaKnown RBP8.31□□□□□ -1.08
CCDC196-201ENST00000359454 ZNF408Q9H9D4 720 aa8.31□□□□□ -1.08
CCDC196-201ENST00000359454 GOPCQ9HD26 462 aa8.31□□□□□ -1.08
CCDC196-201ENST00000359454 RAD17O75943 681 aa8.3□□□□□ -1.08
CCDC196-201ENST00000359454 USP46P62068 366 aa8.3□□□□□ -1.08
CCDC196-201ENST00000359454 HSP90AB3PQ58FF7 597 aa8.3□□□□□ -1.08
CCDC196-201ENST00000359454 TMC4Q7Z404 712 aa8.3□□□□□ -1.08
CCDC196-201ENST00000359454 LRP10Q7Z4F1 713 aa8.3□□□□□ -1.08
CCDC196-201ENST00000359454 TRPM4Q8TD43 1214 aa8.3□□□□□ -1.08
CCDC196-201ENST00000359454 PCMTD1Q96MG8 357 aaPredicted RBP8.3□□□□□ -1.08
CCDC196-201ENST00000359454 PLEKHF1Q96S99 279 aa8.3□□□□□ -1.08
CCDC196-201ENST00000359454 THUMPD2Q9BTF0 503 aaKnown RBP8.3□□□□□ -1.08
CCDC196-201ENST00000359454 PNNQ9H307 717 aaKnown RBP8.3□□□□□ -1.08
CCDC196-201ENST00000359454 CNOT7Q9UIV1 285 aaKnown RBP8.3□□□□□ -1.08
CCDC196-201ENST00000359454 EIF2S2P20042 333 aaKnown RBP8.29□□□□□ -1.08
CCDC196-201ENST00000359454 HUNKP57058 714 aa8.29□□□□□ -1.08
CCDC196-201ENST00000359454 GRAPQ13588 217 aa8.29□□□□□ -1.08
CCDC196-201ENST00000359454 SKIV2LQ15477 1246 aaKnown RBP8.29□□□□□ -1.08
CCDC196-201ENST00000359454 USP48Q86UV5 1035 aa8.29□□□□□ -1.08
CCDC196-201ENST00000359454 NLRP10Q86W26 655 aa8.29□□□□□ -1.08
CCDC196-201ENST00000359454 GRAPLQ8TC17 118 aaPredicted RBP8.29□□□□□ -1.08
CCDC196-201ENST00000359454 DPF2Q92785 391 aa8.29□□□□□ -1.08
CCDC196-201ENST00000359454 PRR14Q9BWN1 585 aa8.29□□□□□ -1.08
CCDC196-201ENST00000359454 POLR3EQ9NVU0 708 aa8.29□□□□□ -1.08
CCDC196-201ENST00000359454 TSPYL4Q9UJ04 414 aa8.29□□□□□ -1.08
CCDC196-201ENST00000359454 DLG5Q8TDM6 1919 aa8.29□□□□□ -1.08
CCDC196-201ENST00000359454 MAPK8IP3Q9UPT6 1336 aa8.29□□□□□ -1.08
CCDC196-201ENST00000359454 YDJCA8MPS7 323 aa8.28□□□□□ -1.08
CCDC196-201ENST00000359454 HCLS1P14317 486 aaPredicted RBP8.28□□□□□ -1.08
CCDC196-201ENST00000359454 CLK2P49760 499 aaKnown RBP8.28□□□□□ -1.08
CCDC196-201ENST00000359454 RGMBQ6NW40 437 aa8.28□□□□□ -1.08
CCDC196-201ENST00000359454 C2orf69Q8N8R5 385 aa8.28□□□□□ -1.08
CCDC196-201ENST00000359454 BABAM1Q9NWV8 329 aa8.28□□□□□ -1.08
CCDC196-201ENST00000359454 SAGE1Q9NXZ1 904 aa8.28□□□□□ -1.08
CCDC196-201ENST00000359454 TRMT112Q9UI30 125 aaKnown RBP8.28□□□□□ -1.08
CCDC196-201ENST00000359454 SH3TC1Q8TE82 1336 aa8.28□□□□□ -1.08
CCDC196-201ENST00000359454 ANKRD36CQ5JPF3 1778 aa8.27□□□□□ -1.08
CCDC196-201ENST00000359454 SHTN1A0MZ66 631 aa8.27□□□□□ -1.09
CCDC196-201ENST00000359454 MOXD2PA6NHM9 499 aa8.27□□□□□ -1.09
CCDC196-201ENST00000359454 FAM155AB1AL88 458 aaPredicted RBP8.27□□□□□ -1.09
CCDC196-201ENST00000359454 HOXA2O43364 376 aa8.27□□□□□ -1.09
CCDC196-201ENST00000359454 ANXA1P04083 346 aa8.27□□□□□ -1.09
CCDC196-201ENST00000359454 RPS12P25398 132 aaKnown RBP8.27□□□□□ -1.09
CCDC196-201ENST00000359454 FUT2Q10981 343 aa8.27□□□□□ -1.09
CCDC196-201ENST00000359454 TCIRG1Q13488 830 aa8.27□□□□□ -1.09
CCDC196-201ENST00000359454 WASHC4Q2M389 1173 aa8.27□□□□□ -1.09
CCDC196-201ENST00000359454 PROSER3Q2NL68 480 aa8.27□□□□□ -1.09
CCDC196-201ENST00000359454 COPS6Q7L5N1 327 aa8.27□□□□□ -1.09
CCDC196-201ENST00000359454 KRT26Q7Z3Y9 468 aa8.27□□□□□ -1.09
CCDC196-201ENST00000359454 RIC3Q7Z5B4 369 aa8.27□□□□□ -1.09
CCDC196-201ENST00000359454 DCPSQ96C86 337 aaKnown RBP8.27□□□□□ -1.09
CCDC196-201ENST00000359454 ZIC5Q96T25 663 aa8.27□□□□□ -1.09
CCDC196-201ENST00000359454 GBA2Q9HCG7 927 aaPredicted RBP8.27□□□□□ -1.09
CCDC196-201ENST00000359454 CASP8AP2Q9UKL3 1982 aa8.26□□□□□ -1.09
CCDC196-201ENST00000359454 LAMB2P55268 1798 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms