RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 STK38LQ9Y2H1 464 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 GBP5Q96PP8 586 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 NUTM2AQ8IVF1 878 aaPredicted RBP21.6■■□□□ 1.05
BRPF3-202ENST00000357641 BICD1Q96G01 975 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 EHMT1Q9H9B1 1298 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 MAP3K1Q13233 1512 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 LIG3P49916 1009 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 LONRF3Q496Y0 759 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 LRRC45Q96CN5 670 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 NMIQ13287 307 aaPredicted RBP21.6■■□□□ 1.05
BRPF3-202ENST00000357641 CEP128Q6ZU80 1094 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 USHBP1Q8N6Y0 703 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 TNNQ9UQP3 1299 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 RIPOR2Q9Y4F9 1068 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 EMILIN1Q9Y6C2 1016 aa21.6■■□□□ 1.05
BRPF3-202ENST00000357641 MRRFQ96E11 262 aaKnown RBP21.59■■□□□ 1.05
BRPF3-202ENST00000357641 CTNND2Q9UQB3 1225 aa21.59■■□□□ 1.05
BRPF3-202ENST00000357641 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.59■■□□□ 1.05
BRPF3-202ENST00000357641 APOBRQ0VD83 1088 aa21.59■■□□□ 1.05
BRPF3-202ENST00000357641 PTPDC1A2A3K4 754 aa21.59■■□□□ 1.05
BRPF3-202ENST00000357641 NDC80O14777 642 aa21.59■■□□□ 1.05
BRPF3-202ENST00000357641 ATP2A2P16615 1042 aaKnown RBP21.59■■□□□ 1.05
BRPF3-202ENST00000357641 CYP26C1Q6V0L0 522 aa21.59■■□□□ 1.05
BRPF3-202ENST00000357641 USP26Q9BXU7 913 aa21.59■■□□□ 1.05
BRPF3-202ENST00000357641 FANCCQ00597 558 aa21.59■■□□□ 1.05
BRPF3-202ENST00000357641 KIAA1524Q8TCG1 905 aa21.59■■□□□ 1.05
BRPF3-202ENST00000357641 TRIM75PA6NK02 468 aa21.59■■□□□ 1.05
BRPF3-202ENST00000357641 JAKMIP2Q96AA8 810 aa21.59■■□□□ 1.05
BRPF3-202ENST00000357641 PABPN1LA6NDY0 278 aaKnown RBP21.58■■□□□ 1.05
BRPF3-202ENST00000357641 GDAP1L1Q96MZ0 367 aa21.58■■□□□ 1.05
BRPF3-202ENST00000357641 MTUS1Q9ULD2 1270 aa21.58■■□□□ 1.05
BRPF3-202ENST00000357641 SAMM50Q9Y512 469 aa21.58■■□□□ 1.05
BRPF3-202ENST00000357641 DIXDC1Q155Q3 683 aa21.58■■□□□ 1.05
BRPF3-202ENST00000357641 PPFIA1Q13136 1202 aa21.58■■□□□ 1.05
BRPF3-202ENST00000357641 SND1Q7KZF4 910 aaKnown RBP eCLIP21.58■■□□□ 1.05
BRPF3-202ENST00000357641 CCDC170Q8IYT3 715 aa21.58■■□□□ 1.05
BRPF3-202ENST00000357641 DBF4Q9UBU7 674 aaPredicted RBP21.58■■□□□ 1.05
BRPF3-202ENST00000357641 CHST3Q7LGC8 479 aa21.58■■□□□ 1.04
BRPF3-202ENST00000357641 FAM83GA6ND36 823 aa21.58■■□□□ 1.04
BRPF3-202ENST00000357641 SEL1L2Q5TEA6 688 aa21.58■■□□□ 1.04
BRPF3-202ENST00000357641 SUDS3Q9H7L9 328 aaPredicted RBP21.58■■□□□ 1.04
BRPF3-202ENST00000357641 DDX21Q9NR30 783 aaKnown RBP eCLIP21.58■■□□□ 1.04
BRPF3-202ENST00000357641 EHBP1L1Q8N3D4 1523 aa21.57■■□□□ 1.04
BRPF3-202ENST00000357641 GNGT1P63211 74 aa21.57■■□□□ 1.04
BRPF3-202ENST00000357641 ANKRD44Q8N8A2 993 aa21.57■■□□□ 1.04
BRPF3-202ENST00000357641 CLSTN2Q9H4D0 955 aa21.57■■□□□ 1.04
BRPF3-202ENST00000357641 TPX2Q9ULW0 747 aaKnown RBP21.57■■□□□ 1.04
BRPF3-202ENST00000357641 RABGAP1Q9Y3P9 1069 aa21.57■■□□□ 1.04
BRPF3-202ENST00000357641 PTCD1O75127 700 aaKnown RBP21.57■■□□□ 1.04
BRPF3-202ENST00000357641 MCMDC2Q4G0Z9 681 aa21.57■■□□□ 1.04
BRPF3-202ENST00000357641 RUFY3Q7L099 469 aa21.57■■□□□ 1.04
BRPF3-202ENST00000357641 PPANQ9NQ55 473 aaKnown RBP21.57■■□□□ 1.04
BRPF3-202ENST00000357641 PDE4BQ07343 736 aa21.57■■□□□ 1.04
BRPF3-202ENST00000357641 UTP11Q9Y3A2 253 aaKnown RBP21.57■■□□□ 1.04
BRPF3-202ENST00000357641 MCM7P33993 719 aa21.56■■□□□ 1.04
BRPF3-202ENST00000357641 SMC1BQ8NDV3 1235 aa21.56■■□□□ 1.04
BRPF3-202ENST00000357641 TRIM31Q9BZY9 425 aa21.56■■□□□ 1.04
BRPF3-202ENST00000357641 VPS16Q9H269 839 aa21.56■■□□□ 1.04
BRPF3-202ENST00000357641 DAPK1P53355 1430 aa21.56■■□□□ 1.04
BRPF3-202ENST00000357641 GADD45BO75293 160 aaPredicted RBP21.56■■□□□ 1.04
BRPF3-202ENST00000357641 STARD3NLO95772 234 aa21.56■■□□□ 1.04
BRPF3-202ENST00000357641 ELP1O95163 1332 aa21.56■■□□□ 1.04
BRPF3-202ENST00000357641 RUFY4Q6ZNE9 571 aa21.56■■□□□ 1.04
BRPF3-202ENST00000357641 HEATR3Q7Z4Q2 680 aa21.56■■□□□ 1.04
BRPF3-202ENST00000357641 KRT23Q9C075 422 aa21.56■■□□□ 1.04
BRPF3-202ENST00000357641 FGD5Q6ZNL6 1462 aa21.55■■□□□ 1.04
BRPF3-202ENST00000357641 HSPA1LP34931 641 aa21.55■■□□□ 1.04
BRPF3-202ENST00000357641 MUM1Q2TAK8 710 aa21.55■■□□□ 1.04
BRPF3-202ENST00000357641 CREB3L3Q68CJ9 461 aa21.55■■□□□ 1.04
BRPF3-202ENST00000357641 DDX27Q96GQ7 796 aaKnown RBP21.55■■□□□ 1.04
BRPF3-202ENST00000357641 IMPACTQ9P2X3 320 aa21.55■■□□□ 1.04
BRPF3-202ENST00000357641 SSX2IPQ9Y2D8 614 aa21.55■■□□□ 1.04
BRPF3-202ENST00000357641 JARID2Q92833 1246 aaPredicted RBP21.55■■□□□ 1.04
BRPF3-202ENST00000357641 ZNF500O60304 480 aaPredicted RBP21.55■■□□□ 1.04
BRPF3-202ENST00000357641 IFIT1BQ5T764 474 aaKnown RBP21.55■■□□□ 1.04
BRPF3-202ENST00000357641 ERMNQ8TAM6 284 aa21.55■■□□□ 1.04
BRPF3-202ENST00000357641 ARHGAP45Q92619 1136 aa21.55■■□□□ 1.04
BRPF3-202ENST00000357641 ERCC5P28715 1186 aaPredicted RBP21.55■■□□□ 1.04
BRPF3-202ENST00000357641 ERCC6LQ2NKX8 1250 aa21.55■■□□□ 1.04
BRPF3-202ENST00000357641 PHLDB2Q86SQ0 1253 aa21.55■■□□□ 1.04
BRPF3-202ENST00000357641 TXNDC16Q9P2K2 825 aa21.55■■□□□ 1.04
BRPF3-202ENST00000357641 PI4KAP2A4QPH2 592 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 CCDC62Q6P9F0 684 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 MPRIPQ6WCQ1 1025 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 ZNF365Q70YC5 407 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 GPR161Q8N6U8 529 aaKnown RBP21.54■■□□□ 1.04
BRPF3-202ENST00000357641 PI4KAP1Q8N8J0 262 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 PLIN2Q99541 437 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 RAPGEF1Q13905 1077 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 PSMD6Q15008 389 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 GOLGA5Q8TBA6 731 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 GAPVD1Q14C86 1478 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 BRAPQ7Z569 592 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 NME9Q86XW9 330 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 IL16Q14005 1332 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 NCAPD3P42695 1498 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 PIK3R4Q99570 1358 aa21.54■■□□□ 1.04
BRPF3-202ENST00000357641 NUDT16Q96DE0 195 aaKnown RBP21.54■■□□□ 1.04
BRPF3-202ENST00000357641 SECISBP2LQ93073 1101 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms