RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 KINO60870 393 aaKnown RBP12.41□□□□□ -0.42
CAPN3-205ENST00000357568 FAM173BQ6P4H8 233 aa12.41□□□□□ -0.42
CAPN3-205ENST00000357568 FCHSD1Q86WN1 690 aa12.41□□□□□ -0.42
CAPN3-205ENST00000357568 NBPF7P0C2Y1 421 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-205ENST00000357568 PNMA6AP0CW24 399 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-205ENST00000357568 ADD1P35611 737 aaKnown RBP12.4□□□□□ -0.42
CAPN3-205ENST00000357568 RGS22Q8NE09 1264 aa12.4□□□□□ -0.42
CAPN3-205ENST00000357568 BRF1Q92994 677 aa12.4□□□□□ -0.42
CAPN3-205ENST00000357568 PPP1R13BQ96KQ4 1090 aa12.4□□□□□ -0.42
CAPN3-205ENST00000357568 UTYO14607 1347 aa12.4□□□□□ -0.42
CAPN3-205ENST00000357568 E4F1Q66K89 784 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-205ENST00000357568 IL17REQ8NFR9 667 aa12.4□□□□□ -0.42
CAPN3-205ENST00000357568 A0A1W2PQ27 194 aa12.39□□□□□ -0.43
CAPN3-205ENST00000357568 A0A1W2PQ64 194 aa12.39□□□□□ -0.43
CAPN3-205ENST00000357568 A0A1W2PQD8 194 aa12.39□□□□□ -0.43
CAPN3-205ENST00000357568 H3BQV1 296 aa12.39□□□□□ -0.43
CAPN3-205ENST00000357568 MYO1BO43795 1136 aa12.39□□□□□ -0.43
CAPN3-205ENST00000357568 CLCN6P51797 869 aa12.39□□□□□ -0.43
CAPN3-205ENST00000357568 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
CAPN3-205ENST00000357568 CCAR1Q8IX12 1150 aaKnown RBP12.39□□□□□ -0.43
CAPN3-205ENST00000357568 NBPF11Q86T75 865 aa12.39□□□□□ -0.43
CAPN3-205ENST00000357568 USP16Q9Y5T5 823 aa12.39□□□□□ -0.43
CAPN3-205ENST00000357568 PAPPAQ13219 1627 aa12.39□□□□□ -0.43
CAPN3-205ENST00000357568 HMGB1P09429 215 aaKnown RBP12.38□□□□□ -0.43
CAPN3-205ENST00000357568 BRD2P25440 801 aaKnown RBP12.38□□□□□ -0.43
CAPN3-205ENST00000357568 ARID5BQ14865 1188 aa12.38□□□□□ -0.43
CAPN3-205ENST00000357568 TMCO3Q6UWJ1 677 aa12.38□□□□□ -0.43
CAPN3-205ENST00000357568 PHAXQ9H814 394 aaKnown RBP12.38□□□□□ -0.43
CAPN3-205ENST00000357568 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-205ENST00000357568 EFCAB8A8MWE9 144 aa12.38□□□□□ -0.43
CAPN3-205ENST00000357568 PFKFB2O60825 505 aa12.38□□□□□ -0.43
CAPN3-205ENST00000357568 PLA2G4AP47712 749 aa12.38□□□□□ -0.43
CAPN3-205ENST00000357568 ETF1P62495 437 aaKnown RBP12.38□□□□□ -0.43
CAPN3-205ENST00000357568 CCDC158Q5M9N0 1113 aa12.38□□□□□ -0.43
CAPN3-205ENST00000357568 HOMEZQ8IX15 550 aa12.38□□□□□ -0.43
CAPN3-205ENST00000357568 ORC3Q9UBD5 711 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-205ENST00000357568 DNAI1Q9UI46 699 aa12.38□□□□□ -0.43
CAPN3-205ENST00000357568 TNS1Q9HBL0 1735 aaKnown RBP12.38□□□□□ -0.43
CAPN3-205ENST00000357568 SFPQP23246 707 aaKnown RBP eCLIP12.37□□□□□ -0.43
CAPN3-205ENST00000357568 EIF4A1P60842 406 aaKnown RBP12.37□□□□□ -0.43
CAPN3-205ENST00000357568 MPRIPQ6WCQ1 1025 aa12.37□□□□□ -0.43
CAPN3-205ENST00000357568 AACSQ86V21 672 aa12.37□□□□□ -0.43
CAPN3-205ENST00000357568 FAM227BQ96M60 508 aa12.37□□□□□ -0.43
CAPN3-205ENST00000357568 PSD3Q9NYI0 1048 aa12.37□□□□□ -0.43
CAPN3-205ENST00000357568 RGPD3A6NKT7 1758 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-205ENST00000357568 RGPD4Q7Z3J3 1758 aa12.37□□□□□ -0.43
CAPN3-205ENST00000357568 TAF5LO75529 589 aa12.37□□□□□ -0.43
CAPN3-205ENST00000357568 GPS2Q13227 327 aa12.37□□□□□ -0.43
CAPN3-205ENST00000357568 NEK1Q96PY6 1258 aa12.37□□□□□ -0.43
CAPN3-205ENST00000357568 BTAF1O14981 1849 aa12.36□□□□□ -0.43
CAPN3-205ENST00000357568 CABP4P57796 275 aa12.36□□□□□ -0.43
CAPN3-205ENST00000357568 ERCC6LQ2NKX8 1250 aa12.36□□□□□ -0.43
CAPN3-205ENST00000357568 SLC52A2Q9HAB3 445 aa12.36□□□□□ -0.43
CAPN3-205ENST00000357568 LGR6Q9HBX8 967 aa12.36□□□□□ -0.43
CAPN3-205ENST00000357568 A0A0D9SFI3 127 aa12.36□□□□□ -0.43
CAPN3-205ENST00000357568 IKBKBO14920 756 aa12.36□□□□□ -0.43
CAPN3-205ENST00000357568 ARHGAP29Q52LW3 1261 aa12.36□□□□□ -0.43
CAPN3-205ENST00000357568 IFNLR1Q8IU57 520 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-205ENST00000357568 FMR1NBQ8N0W7 255 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-205ENST00000357568 MSL3Q8N5Y2 521 aaKnown RBP12.36□□□□□ -0.43
CAPN3-205ENST00000357568 AOPEPQ8N6M6 819 aa12.36□□□□□ -0.43
CAPN3-205ENST00000357568 UBXN4Q92575 508 aa12.36□□□□□ -0.43
CAPN3-205ENST00000357568 SECISBP2LQ93073 1101 aaKnown RBP12.36□□□□□ -0.43
CAPN3-205ENST00000357568 GOLPH3LQ9H4A5 285 aa12.36□□□□□ -0.43
CAPN3-205ENST00000357568 TRMT1Q9NXH9 659 aaKnown RBP12.36□□□□□ -0.43
CAPN3-205ENST00000357568 PI4KAP2A4QPH2 592 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 GOLGA6L9A6NEM1 432 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 TADA3O75528 432 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 CAPN2P17655 700 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 HNRNPH2P55795 449 aaKnown RBP12.35□□□□□ -0.43
CAPN3-205ENST00000357568 LRRFIP1Q32MZ4 808 aaKnown RBP12.35□□□□□ -0.43
CAPN3-205ENST00000357568 CCDC125Q86Z20 511 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 PI4KAP1Q8N8J0 262 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 MRPS27Q92552 414 aaKnown RBP12.35□□□□□ -0.43
CAPN3-205ENST00000357568 AGXT2Q9BYV1 514 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 TMOD3Q9NYL9 352 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.35□□□□□ -0.43
CAPN3-205ENST00000357568 ZNF831Q5JPB2 1677 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 TEFQ10587 303 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 ADALQ6DHV7 355 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 ARMCX5Q6P1M9 558 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 TEX2Q8IWB9 1127 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 NECTIN2Q92692 538 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 FSD1Q9BTV5 496 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 RTEL1Q9NZ71 1219 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 SALL1Q9NSC2 1324 aa12.35□□□□□ -0.43
CAPN3-205ENST00000357568 JAK2O60674 1132 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 JAKMIP3Q5VZ66 844 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 SYT10Q6XYQ8 523 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 MPHOSPH8Q99549 860 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 UBR2Q8IWV8 1755 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 CICQ96RK0 1608 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-205ENST00000357568 CBFA2T2O43439 604 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 G3BP1Q13283 466 aaKnown RBP eCLIP12.34□□□□□ -0.43
CAPN3-205ENST00000357568 FBXL16Q8N461 479 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 FSIP1Q8NA03 581 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 IQUBQ8NA54 791 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 NSUN7Q8NE18 718 aaKnown RBP12.34□□□□□ -0.43
CAPN3-205ENST00000357568 TMX1Q9H3N1 280 aa12.34□□□□□ -0.43
CAPN3-205ENST00000357568 EFCC1Q9HA90 598 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms