RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 RNF181Q9P0P0 153 aa17.2■□□□□ 0.34
USP6-202ENST00000357482 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
USP6-202ENST00000357482 DLEC1Q9Y238 1755 aa17.2■□□□□ 0.34
USP6-202ENST00000357482 CCDC171Q6TFL3 1326 aa17.2■□□□□ 0.34
USP6-202ENST00000357482 CPP00450 1065 aa17.19■□□□□ 0.34
USP6-202ENST00000357482 HLFQ16534 295 aa17.19■□□□□ 0.34
USP6-202ENST00000357482 BABAM1Q9NWV8 329 aa17.19■□□□□ 0.34
USP6-202ENST00000357482 TPTE2Q6XPS3 522 aa17.19■□□□□ 0.34
USP6-202ENST00000357482 MMS22LQ6ZRQ5 1243 aa17.19■□□□□ 0.34
USP6-202ENST00000357482 NECTIN2Q92692 538 aa17.19■□□□□ 0.34
USP6-202ENST00000357482 ARGLU1Q9NWB6 273 aaPredicted RBP17.19■□□□□ 0.34
USP6-202ENST00000357482 ANKRD31Q8N7Z5 1873 aa17.19■□□□□ 0.34
USP6-202ENST00000357482 IRF6O14896 467 aa17.18■□□□□ 0.34
USP6-202ENST00000357482 CEP135Q66GS9 1140 aa17.18■□□□□ 0.34
USP6-202ENST00000357482 TTLL7Q6ZT98 887 aa17.18■□□□□ 0.34
USP6-202ENST00000357482 TBC1D22AQ8WUA7 517 aa17.18■□□□□ 0.34
USP6-202ENST00000357482 EXOC4Q96A65 974 aa17.18■□□□□ 0.34
USP6-202ENST00000357482 ZBTB3Q9H5J0 574 aa17.18■□□□□ 0.34
USP6-202ENST00000357482 FHOD1Q9Y613 1164 aa17.18■□□□□ 0.34
USP6-202ENST00000357482 ST18O60284 1047 aa17.17■□□□□ 0.34
USP6-202ENST00000357482 SLU7O95391 586 aaKnown RBP17.17■□□□□ 0.34
USP6-202ENST00000357482 RASSF7Q02833 373 aa17.17■□□□□ 0.34
USP6-202ENST00000357482 C11orf91Q3C1V1 193 aa17.17■□□□□ 0.34
USP6-202ENST00000357482 JMYQ8N9B5 988 aa17.17■□□□□ 0.34
USP6-202ENST00000357482 SGSM3Q96HU1 749 aa17.17■□□□□ 0.34
USP6-202ENST00000357482 MAP3K15Q6ZN16 1313 aa17.17■□□□□ 0.34
USP6-202ENST00000357482 RGL2O15211 777 aa17.17■□□□□ 0.34
USP6-202ENST00000357482 TSGA10IPQ3SY00 556 aa17.17■□□□□ 0.34
USP6-202ENST00000357482 BCL2L13Q9BXK5 485 aa17.17■□□□□ 0.34
USP6-202ENST00000357482 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
USP6-202ENST00000357482 ELP1O95163 1332 aa17.16■□□□□ 0.34
USP6-202ENST00000357482 ERVV-1B6SEH8 477 aa17.16■□□□□ 0.34
USP6-202ENST00000357482 USP8P40818 1118 aa17.16■□□□□ 0.34
USP6-202ENST00000357482 NUCB1Q02818 461 aa17.16■□□□□ 0.34
USP6-202ENST00000357482 NEK11Q8NG66 645 aa17.16■□□□□ 0.34
USP6-202ENST00000357482 NSFL1CQ9UNZ2 370 aaKnown RBP17.16■□□□□ 0.34
USP6-202ENST00000357482 ZDHHC9Q9Y397 364 aa17.16■□□□□ 0.34
USP6-202ENST00000357482 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
USP6-202ENST00000357482 C21orf2O43822 256 aa17.15■□□□□ 0.34
USP6-202ENST00000357482 CNKSR1Q969H4 720 aa17.15■□□□□ 0.34
USP6-202ENST00000357482 KLHL33A6NCF5 533 aa17.15■□□□□ 0.34
USP6-202ENST00000357482 RPS6KA5O75582 802 aa17.15■□□□□ 0.34
USP6-202ENST00000357482 TUBB4AP04350 444 aa17.15■□□□□ 0.34
USP6-202ENST00000357482 GPTP24298 496 aa17.15■□□□□ 0.34
USP6-202ENST00000357482 PLA2G4AP47712 749 aa17.15■□□□□ 0.34
USP6-202ENST00000357482 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.15■□□□□ 0.34
USP6-202ENST00000357482 PACS2Q86VP3 889 aa17.15■□□□□ 0.34
USP6-202ENST00000357482 MASTLQ96GX5 879 aa17.15■□□□□ 0.34
USP6-202ENST00000357482 UBXN6Q9BZV1 441 aa17.15■□□□□ 0.34
USP6-202ENST00000357482 CHL1O00533 1208 aa17.14■□□□□ 0.33
USP6-202ENST00000357482 NEMFO60524 1076 aa17.14■□□□□ 0.33
USP6-202ENST00000357482 ANXA1P04083 346 aa17.14■□□□□ 0.33
USP6-202ENST00000357482 PNMA6AP0CW24 399 aaPredicted RBP17.14■□□□□ 0.33
USP6-202ENST00000357482 SRGNP10124 158 aa17.14■□□□□ 0.33
USP6-202ENST00000357482 MX1P20591 662 aa17.14■□□□□ 0.33
USP6-202ENST00000357482 SEMA3FQ13275 785 aa17.14■□□□□ 0.33
USP6-202ENST00000357482 STYK1Q6J9G0 422 aa17.14■□□□□ 0.33
USP6-202ENST00000357482 NYXQ9GZU5 481 aa17.14■□□□□ 0.33
USP6-202ENST00000357482 LCMT1Q9UIC8 334 aa17.14■□□□□ 0.33
USP6-202ENST00000357482 ACTN2P35609 894 aa17.13■□□□□ 0.33
USP6-202ENST00000357482 ZRSR1Q15695 479 aaKnown RBP17.13■□□□□ 0.33
USP6-202ENST00000357482 TPD52L1Q16890 204 aaPredicted RBP17.13■□□□□ 0.33
USP6-202ENST00000357482 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
USP6-202ENST00000357482 C16orf45Q96MC5 204 aaPredicted RBP17.13■□□□□ 0.33
USP6-202ENST00000357482 FAM210AQ96ND0 272 aa17.13■□□□□ 0.33
USP6-202ENST00000357482 ST7Q9NRC1 585 aa17.13■□□□□ 0.33
USP6-202ENST00000357482 ZNF215Q9UL58 517 aaPredicted RBP17.13■□□□□ 0.33
USP6-202ENST00000357482 TPM1P09493 284 aa17.13■□□□□ 0.33
USP6-202ENST00000357482 LMNB1P20700 586 aa17.13■□□□□ 0.33
USP6-202ENST00000357482 AIMP1Q12904 312 aaKnown RBP17.13■□□□□ 0.33
USP6-202ENST00000357482 PRPF40BQ6NWY9 871 aaKnown RBP17.13■□□□□ 0.33
USP6-202ENST00000357482 FILIP1Q7Z7B0 1213 aa17.13■□□□□ 0.33
USP6-202ENST00000357482 TMEM87AQ8NBN3 555 aa17.13■□□□□ 0.33
USP6-202ENST00000357482 SSH1Q8WYL5 1049 aa17.13■□□□□ 0.33
USP6-202ENST00000357482 DDX19BQ9UMR2 479 aa17.13■□□□□ 0.33
USP6-202ENST00000357482 BRD1O95696 1058 aa17.12■□□□□ 0.33
USP6-202ENST00000357482 PROSER3Q2NL68 480 aa17.12■□□□□ 0.33
USP6-202ENST00000357482 NUTM1Q86Y26 1132 aa17.12■□□□□ 0.33
USP6-202ENST00000357482 FAM107BQ9H098 131 aa17.12■□□□□ 0.33
USP6-202ENST00000357482 MKRN1Q9UHC7 482 aaKnown RBP17.12■□□□□ 0.33
USP6-202ENST00000357482 CACNA1SQ13698 1873 aa17.12■□□□□ 0.33
USP6-202ENST00000357482 NPR1P16066 1061 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 ERCC3P19447 782 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 MCM2P49736 904 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 NAA30Q147X3 362 aaPredicted RBP17.11■□□□□ 0.33
USP6-202ENST00000357482 LEKR1Q6ZMV7 388 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 NMRK2Q9NPI5 230 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 NUP98P52948 1817 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 ZRANB2O95218 330 aaKnown RBP eCLIP17.11■□□□□ 0.33
USP6-202ENST00000357482 RLBP1P12271 317 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 PDIA6Q15084 440 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 ZKSCAN2Q63HK3 967 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 TMCO3Q6UWJ1 677 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 GIGYF2Q6Y7W6 1299 aaKnown RBP17.11■□□□□ 0.33
USP6-202ENST00000357482 MPNDQ8N594 471 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 TSPYL6Q8N831 410 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 STAG1Q8WVM7 1258 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 ITFG2Q969R8 447 aa17.11■□□□□ 0.33
USP6-202ENST00000357482 NFKBIEO00221 500 aa17.1■□□□□ 0.33
USP6-202ENST00000357482 CDC45O75419 566 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms