RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 KLF18A0A0U1RQI7 1052 aa17.85■□□□□ 0.45
PTBP1-203ENST00000356948 TDRD7Q8NHU6 1098 aaKnown RBP17.85■□□□□ 0.45
PTBP1-203ENST00000356948 NBPF3Q9H094 633 aa17.85■□□□□ 0.45
PTBP1-203ENST00000356948 TRMT1Q9NXH9 659 aaKnown RBP17.85■□□□□ 0.45
PTBP1-203ENST00000356948 DHX40Q8IX18 779 aaKnown RBP17.85■□□□□ 0.45
PTBP1-203ENST00000356948 ENGASEQ8NFI3 743 aa17.85■□□□□ 0.45
PTBP1-203ENST00000356948 GREM2Q9H772 168 aa17.84■□□□□ 0.45
PTBP1-203ENST00000356948 MARCKSP29966 332 aaPredicted RBP17.84■□□□□ 0.45
PTBP1-203ENST00000356948 CCDC94Q9BW85 323 aaPredicted RBP17.84■□□□□ 0.45
PTBP1-203ENST00000356948 CFAP45Q9UL16 551 aa17.84■□□□□ 0.45
PTBP1-203ENST00000356948 PRC1O43663 620 aa17.84■□□□□ 0.45
PTBP1-203ENST00000356948 MCAMP43121 646 aa17.84■□□□□ 0.45
PTBP1-203ENST00000356948 AOPEPQ8N6M6 819 aa17.84■□□□□ 0.45
PTBP1-203ENST00000356948 KIF3AQ9Y496 699 aa17.84■□□□□ 0.45
PTBP1-203ENST00000356948 BRINP3Q76B58 766 aa17.83■□□□□ 0.45
PTBP1-203ENST00000356948 AGXT2Q9BYV1 514 aa17.83■□□□□ 0.45
PTBP1-203ENST00000356948 ZSCAN16Q9H4T2 348 aaPredicted RBP17.83■□□□□ 0.45
PTBP1-203ENST00000356948 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.83■□□□□ 0.45
PTBP1-203ENST00000356948 V9GYY5 206 aaPredicted RBP17.83■□□□□ 0.45
PTBP1-203ENST00000356948 STRCP1A6NGW2 1772 aa17.83■□□□□ 0.44
PTBP1-203ENST00000356948 GOLGA8BA8MQT2 603 aa17.83■□□□□ 0.44
PTBP1-203ENST00000356948 DPCR1Q3MIW9 517 aa17.83■□□□□ 0.44
PTBP1-203ENST00000356948 CCDC191Q8NCU4 936 aa17.83■□□□□ 0.44
PTBP1-203ENST00000356948 PHKBQ93100 1093 aa17.83■□□□□ 0.44
PTBP1-203ENST00000356948 ZNF142P52746 1687 aaPredicted RBP17.83■□□□□ 0.44
PTBP1-203ENST00000356948 ZBTB22O15209 634 aa17.83■□□□□ 0.44
PTBP1-203ENST00000356948 TAF7LQ5H9L4 462 aa17.82■□□□□ 0.44
PTBP1-203ENST00000356948 PDCL2Q8N4E4 241 aa17.82■□□□□ 0.44
PTBP1-203ENST00000356948 TNS3Q68CZ2 1445 aa17.82■□□□□ 0.44
PTBP1-203ENST00000356948 NPHP1O15259 732 aa17.81■□□□□ 0.44
PTBP1-203ENST00000356948 GPAA1O43292 621 aa17.81■□□□□ 0.44
PTBP1-203ENST00000356948 HMGN5P82970 282 aaKnown RBP17.81■□□□□ 0.44
PTBP1-203ENST00000356948 CYB5R4Q7L1T6 521 aa17.81■□□□□ 0.44
PTBP1-203ENST00000356948 PIGBQ92521 554 aa17.81■□□□□ 0.44
PTBP1-203ENST00000356948 ERICH4A6NGS2 130 aa17.81■□□□□ 0.44
PTBP1-203ENST00000356948 SMIM22K7EJ46 135 aa17.81■□□□□ 0.44
PTBP1-203ENST00000356948 NAA16Q6N069 864 aaPredicted RBP17.81■□□□□ 0.44
PTBP1-203ENST00000356948 TBC1D10CQ8IV04 446 aa17.81■□□□□ 0.44
PTBP1-203ENST00000356948 PRIMPOLQ96LW4 560 aa17.81■□□□□ 0.44
PTBP1-203ENST00000356948 TJP1Q07157 1748 aa17.81■□□□□ 0.44
PTBP1-203ENST00000356948 NWD2Q9ULI1 1742 aa17.81■□□□□ 0.44
PTBP1-203ENST00000356948 U2AF2P26368 475 aaKnown RBP eCLIP17.8■□□□□ 0.447e-8■■■□□ 17.9
PTBP1-203ENST00000356948 TCIRG1Q13488 830 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 SLC4A9Q96Q91 983 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 PIH1D3Q9NQM4 214 aaKnown RBP17.8■□□□□ 0.44
PTBP1-203ENST00000356948 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
PTBP1-203ENST00000356948 WDR17Q8IZU2 1322 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 IDH1O75874 414 aaKnown RBP17.8■□□□□ 0.44
PTBP1-203ENST00000356948 APPP05067 770 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 SDF4Q9BRK5 362 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 ISCA1Q9BUE6 129 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 NEDD4P46934 1319 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 PCDH11XQ9BZA7 1347 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 PCDH11YQ9BZA8 1340 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 GOLGA6L19H0YKK7 550 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 KINO60870 393 aaKnown RBP17.8■□□□□ 0.44
PTBP1-203ENST00000356948 HSP90AA4PQ58FG1 418 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 CCDC158Q5M9N0 1113 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 CCDC73Q6ZRK6 1079 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 CMTR1Q8N1G2 835 aaKnown RBP17.8■□□□□ 0.44
PTBP1-203ENST00000356948 LLPHQ9BRT6 129 aaKnown RBP17.8■□□□□ 0.44
PTBP1-203ENST00000356948 TBC1D2BQ9UPU7 963 aa17.8■□□□□ 0.44
PTBP1-203ENST00000356948 A0A0G2JS52 829 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 GOLGA6L6A8MZA4 724 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 WDHD1O75717 1129 aaPredicted RBP17.79■□□□□ 0.44
PTBP1-203ENST00000356948 TNNT1P13805 278 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 SPECC1Q5M775 1068 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 FMR1NBQ8N0W7 255 aaPredicted RBP17.79■□□□□ 0.44
PTBP1-203ENST00000356948 CCDC82Q8N4S0 544 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 TACC3Q9Y6A5 838 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 ADAMTSL3P82987 1691 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 KCPQ6ZWJ8 1503 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 HMGB1P09429 215 aaKnown RBP17.79■□□□□ 0.44
PTBP1-203ENST00000356948 METTL24Q5JXM2 366 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 SLC9C2Q5TAH2 1124 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 LDHAL6AQ6ZMR3 332 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 MB21D2Q8IYB1 491 aaPredicted RBP17.79■□□□□ 0.44
PTBP1-203ENST00000356948 C8orf76Q96K31 380 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 WTIPA6NIX2 430 aaPredicted RBP17.79■□□□□ 0.44
PTBP1-203ENST00000356948 BECN2A8MW95 431 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 ITGA6P23229 1130 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 FAM160A1Q05DH4 1040 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 LRRC8AQ8IWT6 810 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 WWC3Q9ULE0 1092 aa17.79■□□□□ 0.44
PTBP1-203ENST00000356948 IL2RBP14784 551 aa17.78■□□□□ 0.44
PTBP1-203ENST00000356948 CDC27P30260 824 aa17.78■□□□□ 0.44
PTBP1-203ENST00000356948 PHKA1P46020 1223 aa17.78■□□□□ 0.44
PTBP1-203ENST00000356948 GOLGA8FQ08AF8 430 aa17.78■□□□□ 0.44
PTBP1-203ENST00000356948 GOLGA8DPQ0D2H9 430 aa17.78■□□□□ 0.44
PTBP1-203ENST00000356948 LINC00301Q8NCQ3 95 aa17.78■□□□□ 0.44
PTBP1-203ENST00000356948 MROH7-TTC4A0A0A0MT08 1334 aa17.78■□□□□ 0.44
PTBP1-203ENST00000356948 B4E1Z4 1266 aa17.78■□□□□ 0.44
PTBP1-203ENST00000356948 IFIT5Q13325 482 aaKnown RBP17.78■□□□□ 0.44
PTBP1-203ENST00000356948 TPD52L1Q16890 204 aaPredicted RBP17.78■□□□□ 0.44
PTBP1-203ENST00000356948 ZNF274Q96GC6 653 aaPredicted RBP17.78■□□□□ 0.44
PTBP1-203ENST00000356948 CLIC6Q96NY7 704 aa17.78■□□□□ 0.44
PTBP1-203ENST00000356948 GTF2F1P35269 517 aaKnown RBP eCLIP17.78■□□□□ 0.443e-7■■■■□ 21.2
PTBP1-203ENST00000356948 NBPF11Q86T75 865 aa17.78■□□□□ 0.44
PTBP1-203ENST00000356948 MICU3Q86XE3 530 aa17.78■□□□□ 0.44
PTBP1-203ENST00000356948 EVA1CP58658 441 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms