RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 BTG4Q9NY30 223 aa16.2■□□□□ 0.18
SREBF1-202ENST00000355815 ATP10DQ9P241 1426 aa16.2■□□□□ 0.18
SREBF1-202ENST00000355815 CBFA2T2O43439 604 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 ZAP70P43403 619 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 NCOA7Q8NI08 942 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 ZSWIM6Q9HCJ5 1215 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 ARFGAP3Q9NP61 516 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 GPHNQ9NQX3 736 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-202ENST00000355815 KBTBD3Q8NAB2 608 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 ZNF397Q8NF99 534 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-202ENST00000355815 SLC12A7Q9Y666 1083 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 ZSCAN12O43309 604 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 METAP2P50579 478 aaKnown RBP eCLIP16.19■□□□□ 0.182e-6■□□□□ 9
SREBF1-202ENST00000355815 ZSCAN25Q6NSZ9 544 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 SYNE4Q8N205 404 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 AOPEPQ8N6M6 819 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 LEO1Q8WVC0 666 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-202ENST00000355815 XAGE2Q96GT9 111 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 RABEP2Q9H5N1 569 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 TAF6LQ9Y6J9 622 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 LMOD1P29536 600 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-202ENST00000355815 JMYQ8N9B5 988 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 FEZ1Q99689 392 aa16.19■□□□□ 0.18
SREBF1-202ENST00000355815 VWDEQ8N2E2 1590 aa16.18■□□□□ 0.18
SREBF1-202ENST00000355815 AOX1Q06278 1338 aa16.18■□□□□ 0.18
SREBF1-202ENST00000355815 SMTNL1A8MU46 457 aa16.18■□□□□ 0.18
SREBF1-202ENST00000355815 IRS4O14654 1257 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-202ENST00000355815 SLC3A2P08195 630 aaKnown RBP16.18■□□□□ 0.18
SREBF1-202ENST00000355815 CYP21A2P08686 494 aa16.18■□□□□ 0.18
SREBF1-202ENST00000355815 CCDC47Q96A33 483 aaKnown RBP16.18■□□□□ 0.18
SREBF1-202ENST00000355815 ADORA1P30542 326 aa16.18■□□□□ 0.18
SREBF1-202ENST00000355815 IARSP41252 1262 aaKnown RBP16.18■□□□□ 0.18
SREBF1-202ENST00000355815 MAP4K1Q92918 833 aa16.18■□□□□ 0.18
SREBF1-202ENST00000355815 SNAP23O00161 211 aa16.18■□□□□ 0.18
SREBF1-202ENST00000355815 NR1I2O75469 434 aa16.18■□□□□ 0.18
SREBF1-202ENST00000355815 MAP3K12Q12852 859 aa16.18■□□□□ 0.18
SREBF1-202ENST00000355815 SPECC1Q5M775 1068 aa16.18■□□□□ 0.18
SREBF1-202ENST00000355815 ERBB3P21860 1342 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 B4E1Z4 1266 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 CYP27B1O15528 508 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 MICALL1Q8N3F8 863 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 ALG1Q9BT22 464 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 KDRP35968 1356 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 SHTN1A0MZ66 631 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 PPARDQ03181 441 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 KRBA2Q6ZNG9 492 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 ASAP1Q9ULH1 1129 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 MYOM1P52179 1685 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 KIF5CO60282 957 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 MATR3P43243 847 aaKnown RBP eCLIP16.17■□□□□ 0.18
SREBF1-202ENST00000355815 PHKBQ93100 1093 aa16.17■□□□□ 0.18
SREBF1-202ENST00000355815 GOLGA6L10A6NI86 522 aa16.16■□□□□ 0.18
SREBF1-202ENST00000355815 ZNHIT6Q9NWK9 470 aaKnown RBP16.16■□□□□ 0.18
SREBF1-202ENST00000355815 ATP5JP18859 108 aa16.16■□□□□ 0.18
SREBF1-202ENST00000355815 ITGA6P23229 1130 aa16.16■□□□□ 0.18
SREBF1-202ENST00000355815 PTPN12Q05209 780 aaKnown RBP16.16■□□□□ 0.18
SREBF1-202ENST00000355815 LRMPQ12912 555 aa16.16■□□□□ 0.18
SREBF1-202ENST00000355815 PPP1R9BQ96SB3 815 aa16.16■□□□□ 0.18
SREBF1-202ENST00000355815 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
SREBF1-202ENST00000355815 VPS18Q9P253 973 aa16.16■□□□□ 0.18
SREBF1-202ENST00000355815 DHX8Q14562 1220 aaKnown RBP16.16■□□□□ 0.18
SREBF1-202ENST00000355815 DNAJC21Q5F1R6 531 aaKnown RBP16.16■□□□□ 0.18
SREBF1-202ENST00000355815 KIAA1328Q86T90 577 aa16.16■□□□□ 0.18
SREBF1-202ENST00000355815 TXLNBQ8N3L3 684 aa16.16■□□□□ 0.18
SREBF1-202ENST00000355815 COL3A1P02461 1466 aaPredicted RBP16.15■□□□□ 0.18
SREBF1-202ENST00000355815 hCG_1642624A0A1W2PR95 340 aa16.15■□□□□ 0.18
SREBF1-202ENST00000355815 ATP2B2Q01814 1243 aa16.15■□□□□ 0.18
SREBF1-202ENST00000355815 DZIP3Q86Y13 1208 aaKnown RBP16.15■□□□□ 0.18
SREBF1-202ENST00000355815 RASSF4Q9H2L5 321 aa16.15■□□□□ 0.18
SREBF1-202ENST00000355815 ZSCAN16Q9H4T2 348 aaPredicted RBP16.15■□□□□ 0.18
SREBF1-202ENST00000355815 MEX3CQ5U5Q3 659 aaKnown RBP16.15■□□□□ 0.18
SREBF1-202ENST00000355815 CMTR1Q8N1G2 835 aaKnown RBP16.15■□□□□ 0.18
SREBF1-202ENST00000355815 CBX8Q9HC52 389 aa16.15■□□□□ 0.18
SREBF1-202ENST00000355815 STX1AQ16623 288 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 MAGEB6Q8N7X4 407 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 RGS12O14924 1447 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 ZC3H13Q5T200 1668 aaKnown RBP16.14■□□□□ 0.17
SREBF1-202ENST00000355815 E7EWF7 191 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 GPAA1O43292 621 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 NEMFO60524 1076 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 XBP1P17861 261 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 CNNM3Q8NE01 707 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 ADCY9O60503 1353 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 PRDM1O75626 825 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 KCNQ4P56696 695 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 NECTIN1Q15223 517 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 ENOX2Q16206 610 aaKnown RBP16.14■□□□□ 0.17
SREBF1-202ENST00000355815 PUF60Q9UHX1 559 aaKnown RBP16.14■□□□□ 0.17
SREBF1-202ENST00000355815 AK9Q5TCS8 1911 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 MAP2P11137 1827 aaKnown RBP16.14■□□□□ 0.17
SREBF1-202ENST00000355815 CDKL5O76039 1030 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 GSDMDP57764 484 aa16.14■□□□□ 0.17
SREBF1-202ENST00000355815 ZBTB43O43298 467 aa16.13■□□□□ 0.17
SREBF1-202ENST00000355815 SLC5A1P13866 664 aa16.13■□□□□ 0.17
SREBF1-202ENST00000355815 KARSQ15046 597 aaKnown RBP16.13■□□□□ 0.17
SREBF1-202ENST00000355815 DRC1Q96MC2 740 aa16.13■□□□□ 0.17
SREBF1-202ENST00000355815 USP28Q96RU2 1077 aa16.13■□□□□ 0.17
SREBF1-202ENST00000355815 GNL3LQ9NVN8 582 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms