RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 DNAI1Q9UI46 699 aa20.67■□□□□ 0.9
VHL-202ENST00000345392 E7EWF7 191 aa20.66■□□□□ 0.9
VHL-202ENST00000345392 GOLIM4O00461 696 aa20.66■□□□□ 0.9
VHL-202ENST00000345392 RFX5P48382 616 aaPredicted RBP20.66■□□□□ 0.9
VHL-202ENST00000345392 STK38Q15208 465 aa20.66■□□□□ 0.9
VHL-202ENST00000345392 ATL3Q6DD88 541 aa20.66■□□□□ 0.9
VHL-202ENST00000345392 LINC00301Q8NCQ3 95 aa20.66■□□□□ 0.9
VHL-202ENST00000345392 CARMIL3Q8ND23 1372 aa20.66■□□□□ 0.9
VHL-202ENST00000345392 CABLES1Q8TDN4 633 aa20.66■□□□□ 0.9
VHL-202ENST00000345392 RAPGEF4Q8WZA2 1011 aa20.66■□□□□ 0.9
VHL-202ENST00000345392 GJB4Q9NTQ9 266 aa20.66■□□□□ 0.9
VHL-202ENST00000345392 NCAPD2Q15021 1401 aa20.66■□□□□ 0.9
VHL-202ENST00000345392 PSDA5PKW4 1024 aaPredicted RBP20.66■□□□□ 0.9
VHL-202ENST00000345392 GTF2E1P29083 439 aaPredicted RBP20.66■□□□□ 0.9
VHL-202ENST00000345392 PTPN21Q16825 1174 aa20.66■□□□□ 0.9
VHL-202ENST00000345392 RTEL1Q9NZ71 1219 aa20.66■□□□□ 0.9
VHL-202ENST00000345392 SLC52A2Q9HAB3 445 aa20.65■□□□□ 0.9
VHL-202ENST00000345392 KDM6AO15550 1401 aaPredicted RBP20.65■□□□□ 0.9
VHL-202ENST00000345392 NEDD4P46934 1319 aa20.65■□□□□ 0.9
VHL-202ENST00000345392 PNMA6AP0CW24 399 aaPredicted RBP20.65■□□□□ 0.9
VHL-202ENST00000345392 ATP1A3P13637 1013 aa20.65■□□□□ 0.9
VHL-202ENST00000345392 KBTBD3Q8NAB2 608 aa20.65■□□□□ 0.9
VHL-202ENST00000345392 C5P01031 1676 aa20.64■□□□□ 0.9
VHL-202ENST00000345392 MYH15Q9Y2K3 1946 aa20.64■□□□□ 0.9
VHL-202ENST00000345392 SLC3A2P08195 630 aaKnown RBP20.64■□□□□ 0.9
VHL-202ENST00000345392 IRX5P78411 483 aaPredicted RBP20.64■□□□□ 0.9
VHL-202ENST00000345392 CHRNA2Q15822 529 aa20.64■□□□□ 0.9
VHL-202ENST00000345392 TIGD1Q96MW7 591 aa20.64■□□□□ 0.9
VHL-202ENST00000345392 NEUROD6Q96NK8 337 aa20.64■□□□□ 0.9
VHL-202ENST00000345392 PLA2G4AP47712 749 aa20.64■□□□□ 0.89
VHL-202ENST00000345392 GOLGA8FQ08AF8 430 aa20.64■□□□□ 0.89
VHL-202ENST00000345392 GOLGA8DPQ0D2H9 430 aa20.64■□□□□ 0.89
VHL-202ENST00000345392 NCAPHQ15003 741 aa20.64■□□□□ 0.89
VHL-202ENST00000345392 TTLL5Q6EMB2 1281 aa20.64■□□□□ 0.89
VHL-202ENST00000345392 ANKRD13DQ6ZTN6 518 aa20.64■□□□□ 0.89
VHL-202ENST00000345392 RAB11FIP4Q86YS3 637 aa20.64■□□□□ 0.89
VHL-202ENST00000345392 METTL22Q9BUU2 404 aaPredicted RBP20.64■□□□□ 0.89
VHL-202ENST00000345392 TAOK2Q9UL54 1235 aa20.64■□□□□ 0.89
VHL-202ENST00000345392 AGXT2Q9BYV1 514 aa20.63■□□□□ 0.89
VHL-202ENST00000345392 ZNF202O95125 648 aa20.63■□□□□ 0.89
VHL-202ENST00000345392 CSB-PGBD3P0DP91 1061 aa20.63■□□□□ 0.89
VHL-202ENST00000345392 TRERF1Q96PN7 1200 aa20.63■□□□□ 0.89
VHL-202ENST00000345392 A0A1W2PQ27 194 aa20.62■□□□□ 0.89
VHL-202ENST00000345392 A0A1W2PQ64 194 aa20.62■□□□□ 0.89
VHL-202ENST00000345392 A0A1W2PQD8 194 aa20.62■□□□□ 0.89
VHL-202ENST00000345392 FANCGO15287 622 aa20.62■□□□□ 0.89
VHL-202ENST00000345392 HSPD1P10809 573 aaKnown RBP20.62■□□□□ 0.89
VHL-202ENST00000345392 ETF1P62495 437 aaKnown RBP20.62■□□□□ 0.89
VHL-202ENST00000345392 FANCCQ00597 558 aa20.62■□□□□ 0.89
VHL-202ENST00000345392 UBXN4Q92575 508 aa20.62■□□□□ 0.89
VHL-202ENST00000345392 SPTLC2O15270 562 aa20.62■□□□□ 0.89
VHL-202ENST00000345392 EPC1Q9H2F5 836 aa20.62■□□□□ 0.89
VHL-202ENST00000345392 MRC1P22897 1456 aa20.62■□□□□ 0.89
VHL-202ENST00000345392 POLR3GO15318 223 aaPredicted RBP20.61■□□□□ 0.89
VHL-202ENST00000345392 NRDCO43847 1150 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 PHKG2P15735 406 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 NLRP12P59046 1061 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 FAM177A1Q8N128 213 aaPredicted RBP20.61■□□□□ 0.89
VHL-202ENST00000345392 BPIFA3Q9BQP9 254 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 LAMA4Q16363 1823 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 SH3TC1Q8TE82 1336 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 A0A087WZG4 1122 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 URI1O94763 535 aaPredicted RBP20.61■□□□□ 0.89
VHL-202ENST00000345392 SEC31AO94979 1220 aaKnown RBP20.61■□□□□ 0.89
VHL-202ENST00000345392 TIMM10P62072 90 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 DPF2Q92785 391 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 ZNF274Q96GC6 653 aaPredicted RBP20.61■□□□□ 0.89
VHL-202ENST00000345392 CYP2C19P33261 490 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 TPM4P67936 248 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 C8orf76Q96K31 380 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 UTP14AQ9BVJ6 771 aaKnown RBP20.61■□□□□ 0.89
VHL-202ENST00000345392 PAG1Q9NWQ8 432 aa20.61■□□□□ 0.89
VHL-202ENST00000345392 ORC3Q9UBD5 711 aaPredicted RBP20.61■□□□□ 0.89
VHL-202ENST00000345392 DSCC1Q9BVC3 393 aa20.6■□□□□ 0.89
VHL-202ENST00000345392 C19orf44Q9H6X5 657 aa20.6■□□□□ 0.89
VHL-202ENST00000345392 SIPA1L3O60292 1781 aaPredicted RBP20.6■□□□□ 0.89
VHL-202ENST00000345392 ATF3P18847 181 aa20.6■□□□□ 0.89
VHL-202ENST00000345392 MARCKSP29966 332 aaPredicted RBP20.6■□□□□ 0.89
VHL-202ENST00000345392 TRIM65Q6PJ69 517 aa20.6■□□□□ 0.89
VHL-202ENST00000345392 TMCO3Q6UWJ1 677 aa20.6■□□□□ 0.89
VHL-202ENST00000345392 TTC5Q8N0Z6 440 aa20.6■□□□□ 0.89
VHL-202ENST00000345392 MNS1Q8NEH6 495 aa20.6■□□□□ 0.89
VHL-202ENST00000345392 KCNG4Q8TDN1 519 aa20.6■□□□□ 0.89
VHL-202ENST00000345392 CARD6Q9BX69 1037 aa20.6■□□□□ 0.89
VHL-202ENST00000345392 HSD3B7Q9H2F3 369 aa20.6■□□□□ 0.89
VHL-202ENST00000345392 CALCOCO1Q9P1Z2 691 aa20.6■□□□□ 0.89
VHL-202ENST00000345392 HAND2P61296 217 aa20.59■□□□□ 0.89
VHL-202ENST00000345392 MEGF6O75095 1541 aa20.59■□□□□ 0.89
VHL-202ENST00000345392 VGLL3A8MV65 326 aa20.59■□□□□ 0.89
VHL-202ENST00000345392 ZRANB2O95218 330 aaKnown RBP eCLIP20.59■□□□□ 0.89
VHL-202ENST00000345392 PFKFB1P16118 471 aa20.59■□□□□ 0.89
VHL-202ENST00000345392 LRP10Q7Z4F1 713 aa20.59■□□□□ 0.89
VHL-202ENST00000345392 RFX7Q2KHR2 1363 aa20.58■□□□□ 0.89
VHL-202ENST00000345392 SLIT3O75094 1523 aa20.58■□□□□ 0.89
VHL-202ENST00000345392 KIF28PB7ZC32 967 aa20.58■□□□□ 0.89
VHL-202ENST00000345392 TATP17735 454 aaPredicted RBP20.58■□□□□ 0.89
VHL-202ENST00000345392 HNRNPH2P55795 449 aaKnown RBP20.58■□□□□ 0.89
VHL-202ENST00000345392 MYSM1Q5VVJ2 828 aa20.58■□□□□ 0.89
VHL-202ENST00000345392 LMBR1LQ6UX01 489 aa20.58■□□□□ 0.89
VHL-202ENST00000345392 TMX1Q9H3N1 280 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms