RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 CCDC24Q8N4L8 307 aa30.07■■■□□ 2.4
TRADD-201ENST00000345057 TNPO1Q92973 898 aaKnown RBP30.07■■■□□ 2.4
TRADD-201ENST00000345057 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.07■■■□□ 2.4
TRADD-201ENST00000345057 GPAA1O43292 621 aa30.06■■■□□ 2.4
TRADD-201ENST00000345057 PUS7LQ9H0K6 701 aaKnown RBP30.06■■■□□ 2.4
TRADD-201ENST00000345057 TAF1P21675 1872 aa30.06■■■□□ 2.4
TRADD-201ENST00000345057 MCM4P33991 863 aa30.06■■■□□ 2.4
TRADD-201ENST00000345057 RPGRQ92834 1020 aaKnown RBP30.06■■■□□ 2.4
TRADD-201ENST00000345057 AKT1S1Q96B36 256 aa30.06■■■□□ 2.4
TRADD-201ENST00000345057 DDX11L8A8MPP1 907 aa30.05■■■□□ 2.4
TRADD-201ENST00000345057 CPA1P15085 419 aa30.05■■■□□ 2.4
TRADD-201ENST00000345057 PTMSP20962 102 aa30.05■■■□□ 2.4
TRADD-201ENST00000345057 DENND2AQ9ULE3 1009 aa30.05■■■□□ 2.4
TRADD-201ENST00000345057 ZNF532Q9HCE3 1301 aa30.05■■■□□ 2.4
TRADD-201ENST00000345057 ZBTB22O15209 634 aa30.04■■■□□ 2.4
TRADD-201ENST00000345057 NLGN1Q8N2Q7 840 aa30.04■■■□□ 2.4
TRADD-201ENST00000345057 IMMTQ16891 758 aaKnown RBP30.04■■■□□ 2.4
TRADD-201ENST00000345057 CRY2Q49AN0 593 aa30.04■■■□□ 2.4
TRADD-201ENST00000345057 PDS5AQ29RF7 1337 aaKnown RBP30.03■■■□□ 2.4
TRADD-201ENST00000345057 TCRBV5S4A2TA0A5A2 114 aa30.02■■■□□ 2.4
TRADD-201ENST00000345057 CLEC17AQ6ZS10 378 aa30.02■■■□□ 2.4
TRADD-201ENST00000345057 GYG1P46976 350 aa30.02■■■□□ 2.4
TRADD-201ENST00000345057 RBM17Q96I25 401 aaKnown RBP30.02■■■□□ 2.4
TRADD-201ENST00000345057 WWC3Q9ULE0 1092 aa30.02■■■□□ 2.4
TRADD-201ENST00000345057 POLRMTO00411 1230 aaKnown RBP30.01■■■□□ 2.39
TRADD-201ENST00000345057 FBXO33Q7Z6M2 555 aa30.01■■■□□ 2.39
TRADD-201ENST00000345057 AIDAQ96BJ3 306 aa30.01■■■□□ 2.39
TRADD-201ENST00000345057 FAM84BQ96KN1 310 aaPredicted RBP30.01■■■□□ 2.39
TRADD-201ENST00000345057 LRP2BPQ9P2M1 347 aa30.01■■■□□ 2.39
TRADD-201ENST00000345057 TNS1Q9HBL0 1735 aaKnown RBP30.01■■■□□ 2.39
TRADD-201ENST00000345057 ZNF827Q17R98 1081 aa30■■■□□ 2.39
TRADD-201ENST00000345057 LEMD3Q9Y2U8 911 aa30■■■□□ 2.39
TRADD-201ENST00000345057 TAF6LQ9Y6J9 622 aa30■■■□□ 2.39
TRADD-201ENST00000345057 MAGEB6Q8N7X4 407 aa29.99■■■□□ 2.39
TRADD-201ENST00000345057 SOCS7O14512 581 aa29.99■■■□□ 2.39
TRADD-201ENST00000345057 GOLGA6L22H0YM25 854 aa29.98■■■□□ 2.39
TRADD-201ENST00000345057 DHX32Q7L7V1 743 aaKnown RBP29.98■■■□□ 2.39
TRADD-201ENST00000345057 FGAP02671 866 aa29.97■■■□□ 2.39
TRADD-201ENST00000345057 GNAT2P19087 354 aa29.97■■■□□ 2.39
TRADD-201ENST00000345057 HIBADHP31937 336 aaKnown RBP29.97■■■□□ 2.39
TRADD-201ENST00000345057 DDR1Q08345 913 aa29.97■■■□□ 2.39
TRADD-201ENST00000345057 TMED8Q6PL24 325 aaPredicted RBP29.97■■■□□ 2.39
TRADD-201ENST00000345057 ZMYM6O95789 1325 aa29.97■■■□□ 2.39
TRADD-201ENST00000345057 XDHP47989 1333 aa29.97■■■□□ 2.39
TRADD-201ENST00000345057 MYO5AQ9Y4I1 1855 aaKnown RBP29.97■■■□□ 2.39
TRADD-201ENST00000345057 E7EWF7 191 aa29.97■■■□□ 2.39
TRADD-201ENST00000345057 IGSF3O75054 1194 aa29.96■■■□□ 2.39
TRADD-201ENST00000345057 ANKIB1Q9P2G1 1089 aa29.96■■■□□ 2.39
TRADD-201ENST00000345057 SMC3Q9UQE7 1217 aa29.96■■■□□ 2.39
TRADD-201ENST00000345057 KLRG2A4D1S0 409 aaPredicted RBP29.95■■■□□ 2.39
TRADD-201ENST00000345057 ZNF213O14771 459 aa29.95■■■□□ 2.39
TRADD-201ENST00000345057 FOXP2O15409 715 aa29.95■■■□□ 2.39
TRADD-201ENST00000345057 BBOX1O75936 387 aa29.95■■■□□ 2.39
TRADD-201ENST00000345057 PDIA4P13667 645 aaKnown RBP29.95■■■□□ 2.39
TRADD-201ENST00000345057 HOXA10P31260 410 aaPredicted RBP29.95■■■□□ 2.39
TRADD-201ENST00000345057 TMC4Q7Z404 712 aa29.95■■■□□ 2.39
TRADD-201ENST00000345057 COL23A1Q86Y22 540 aaPredicted RBP29.95■■■□□ 2.39
TRADD-201ENST00000345057 UPF1Q92900 1129 aaKnown RBP eCLIP29.95■■■□□ 2.38
TRADD-201ENST00000345057 CRAMP1Q96RY5 1269 aa29.95■■■□□ 2.38
TRADD-201ENST00000345057 STRBPQ96SI9 672 aaKnown RBP29.95■■■□□ 2.38
TRADD-201ENST00000345057 TPCN1Q9ULQ1 816 aa29.95■■■□□ 2.38
TRADD-201ENST00000345057 TOB2Q14106 344 aaPredicted RBP29.94■■■□□ 2.38
TRADD-201ENST00000345057 ALX1Q15699 326 aa29.94■■■□□ 2.38
TRADD-201ENST00000345057 STOX1Q6ZVD7 989 aa29.94■■■□□ 2.38
TRADD-201ENST00000345057 PNPLA7Q6ZV29 1317 aa29.94■■■□□ 2.38
TRADD-201ENST00000345057 FGD1P98174 961 aa29.93■■■□□ 2.38
TRADD-201ENST00000345057 ME3Q16798 604 aa29.93■■■□□ 2.38
TRADD-201ENST00000345057 ABCF2Q9UG63 623 aa29.93■■■□□ 2.38
TRADD-201ENST00000345057 PATL2C9JE40 543 aaKnown RBP29.92■■■□□ 2.38
TRADD-201ENST00000345057 APPP05067 770 aa29.92■■■□□ 2.38
TRADD-201ENST00000345057 Q6ZUG5 572 aa29.92■■■□□ 2.38
TRADD-201ENST00000345057 CCDC83Q8IWF9 413 aa29.92■■■□□ 2.38
TRADD-201ENST00000345057 IQSEC3Q9UPP2 1182 aaPredicted RBP29.92■■■□□ 2.38
TRADD-201ENST00000345057 BRD1O95696 1058 aa29.91■■■□□ 2.38
TRADD-201ENST00000345057 TTLL5Q6EMB2 1281 aa29.91■■■□□ 2.38
TRADD-201ENST00000345057 C15orf52Q6ZUT6 534 aaKnown RBP29.91■■■□□ 2.38
TRADD-201ENST00000345057 CHMP4CQ96CF2 233 aa29.91■■■□□ 2.38
TRADD-201ENST00000345057 LARP6Q9BRS8 491 aaKnown RBP29.91■■■□□ 2.38
TRADD-201ENST00000345057 BRIP1Q9BX63 1249 aa29.91■■■□□ 2.38
TRADD-201ENST00000345057 RAI14Q9P0K7 980 aa29.91■■■□□ 2.38
TRADD-201ENST00000345057 WDR33Q9C0J8 1336 aaKnown RBP29.91■■■□□ 2.38
TRADD-201ENST00000345057 MBD4O95243 580 aa29.91■■■□□ 2.38
TRADD-201ENST00000345057 LARGE1O95461 756 aa29.91■■■□□ 2.38
TRADD-201ENST00000345057 EXOSC10Q01780 885 aaKnown RBP29.91■■■□□ 2.38
TRADD-201ENST00000345057 NACAP1Q9BZK3 213 aa29.91■■■□□ 2.38
TRADD-201ENST00000345057 NRXN2Q9P2S2 1712 aa29.91■■■□□ 2.38
TRADD-201ENST00000345057 COL1A1P02452 1464 aaPredicted RBP29.9■■■□□ 2.38
TRADD-201ENST00000345057 FBXL16Q8N461 479 aa29.9■■■□□ 2.38
TRADD-201ENST00000345057 TCEANC2Q96MN5 208 aa29.9■■■□□ 2.38
TRADD-201ENST00000345057 BAG4O95429 457 aaKnown RBP29.89■■■□□ 2.38
TRADD-201ENST00000345057 ATP2B4P23634 1241 aa29.89■■■□□ 2.38
TRADD-201ENST00000345057 NCOA7Q8NI08 942 aa29.89■■■□□ 2.38
TRADD-201ENST00000345057 AGXT2Q9BYV1 514 aa29.89■■■□□ 2.38
TRADD-201ENST00000345057 MYH13Q9UKX3 1938 aa29.89■■■□□ 2.38
TRADD-201ENST00000345057 LAMA4Q16363 1823 aa29.89■■■□□ 2.38
TRADD-201ENST00000345057 WTIPA6NIX2 430 aaPredicted RBP29.89■■■□□ 2.37
TRADD-201ENST00000345057 CYP7A1P22680 504 aa29.89■■■□□ 2.37
TRADD-201ENST00000345057 TRDNQ13061 729 aa29.89■■■□□ 2.37
TRADD-201ENST00000345057 PKP1Q13835 747 aa29.89■■■□□ 2.37
TRADD-201ENST00000345057 RALYLQ86SE5 291 aaKnown RBP29.89■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms