RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 POSTNQ15063 836 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 PPP1R21Q6ZMI0 780 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 FAM71BQ8TC56 605 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 API5Q9BZZ5 524 aaKnown RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SNUPNO95149 360 aaKnown RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 OLR1P78380 273 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SPA17Q15506 151 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SPECC1Q5M775 1068 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 TMCO5AQ8N6Q1 288 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 PIP4K2CQ8TBX8 421 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 PRDM16Q9HAZ2 1276 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SCINQ9Y6U3 715 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 ANKRD36BQ8N2N9 1353 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 PCSK1NQ9UHG2 260 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 GOLGA8BA8MQT2 603 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 PAFAH1B1P43034 410 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 ATICP31939 592 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 ZBTB16Q05516 673 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 CCDC102BQ68D86 513 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 KIAA1524Q8TCG1 905 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 LTV1Q96GA3 475 aaPredicted RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 PICK1Q9NRD5 415 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SCLT1Q96NL6 688 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 MLECQ14165 292 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 DIAPH2O60879 1101 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SAFBQ15424 915 aaKnown RBP eCLIP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 IRGQQ8WZA9 623 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 NRBF2Q96F24 287 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SCOCQ9UIL1 159 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SNCBQ16143 134 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 FAM186BQ8IYM0 893 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 RAB11FIP4Q86YS3 637 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 AMOTL1Q8IY63 956 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 ZNF396Q96N95 335 aaPredicted RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SELENOSQ9BQE4 189 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SOGA1O94964 1423 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 VIL1P09327 827 aaKnown RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SDF4Q9BRK5 362 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 SCAND2PQ9GZW5 306 aaPredicted RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 RNF217Q8TC41 542 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 PRPF31Q8WWY3 499 aaKnown RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 RSPH1Q8WYR4 309 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 IWS1Q96ST2 819 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 TSC22D3Q99576 134 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 FESP07332 822 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 CTCFP49711 727 aaPredicted RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 BIRC2Q13490 618 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 BYSLQ13895 437 aaKnown RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 RNF10Q8N5U6 811 aaKnown RBP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 MAB21L3Q8N8X9 362 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 AREL1O15033 823 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 CETN2P41208 172 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 PLVAPQ9BX97 442 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 HNRNPCP07910 306 aaKnown RBP eCLIP4.24□□□□□ -1.73
SYNE2-202ENST00000344113 LMNB1P20700 586 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 S100A1P23297 94 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 KLHDC4Q8TBB5 520 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 HVCN1Q96D96 273 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 MTA3Q9BTC8 594 aa4.24□□□□□ -1.73
SYNE2-202ENST00000344113 CCDC129Q6ZRS4 1044 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 TTC12Q9H892 705 aaPredicted RBP4.23□□□□□ -1.73
SYNE2-202ENST00000344113 CALB2P22676 271 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 TSGA10Q9BZW7 698 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 TRPC3Q13507 836 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 RAB3GAP2Q9H2M9 1393 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 UBE2HP62256 183 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 WDR91A4D1P6 747 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 K7ELQ4 463 aaPredicted RBP4.23□□□□□ -1.73
SYNE2-202ENST00000344113 FAM177A1Q8N128 213 aaPredicted RBP4.23□□□□□ -1.73
SYNE2-202ENST00000344113 HAUS8Q9BT25 410 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 DDX21Q9NR30 783 aaKnown RBP eCLIP4.23□□□□□ -1.73
SYNE2-202ENST00000344113 FAF1Q9UNN5 650 aaPredicted RBP4.23□□□□□ -1.73
SYNE2-202ENST00000344113 RBM6P78332 1123 aaKnown RBP4.23□□□□□ -1.73
SYNE2-202ENST00000344113 RUFY4Q6ZNE9 571 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 EXOC6Q8TAG9 804 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 MAML1Q92585 1016 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 SLAIN2Q9P270 581 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 SUN2Q9UH99 717 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 PLEKHG2Q9H7P9 1386 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 KIF5AQ12840 1032 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 SPAG5Q96R06 1193 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 FHOD3Q2V2M9 1422 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 IQCB1Q15051 598 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 BMP2KLQ5H9B9 411 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 SLC30A9Q6PML9 568 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 RRP15Q9Y3B9 282 aaKnown RBP4.23□□□□□ -1.73
SYNE2-202ENST00000344113 FLT3P36888 993 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 C4BPBP20851 252 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 ESRRGP62508 458 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 VPS36Q86VN1 386 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 E9PMD0 336 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 KBTBD12Q3ZCT8 623 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 KIAA1841Q6NSI8 718 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 KIF6Q6ZMV9 814 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 AFAP1Q8N556 730 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 RIOK3O14730 519 aaKnown RBP4.23□□□□□ -1.73
SYNE2-202ENST00000344113 CFAP100Q494V2 611 aa4.23□□□□□ -1.73
SYNE2-202ENST00000344113 CCDC155Q8N6L0 562 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms