RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 U3KPZ7 1027 aaPredicted RBP17.15■□□□□ 0.34
CLCN1-201ENST00000343257 GRM8O00222 908 aa17.15■□□□□ 0.34
CLCN1-201ENST00000343257 TPM1P09493 284 aa17.15■□□□□ 0.34
CLCN1-201ENST00000343257 RHOXF2BP0C7M4 288 aa17.15■□□□□ 0.34
CLCN1-201ENST00000343257 NOP2P46087 812 aaKnown RBP17.15■□□□□ 0.34
CLCN1-201ENST00000343257 TFCP2Q12800 502 aa17.15■□□□□ 0.34
CLCN1-201ENST00000343257 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
CLCN1-201ENST00000343257 RHOXF2Q9BQY4 288 aa17.15■□□□□ 0.34
CLCN1-201ENST00000343257 HSD3B7Q9H2F3 369 aa17.15■□□□□ 0.34
CLCN1-201ENST00000343257 FAN1Q9Y2M0 1017 aa17.15■□□□□ 0.34
CLCN1-201ENST00000343257 SBNO1A3KN83 1393 aa17.14■□□□□ 0.34
CLCN1-201ENST00000343257 ACTN2P35609 894 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 PIP4K2AP48426 406 aaPredicted RBP17.14■□□□□ 0.33
CLCN1-201ENST00000343257 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 SYNE3Q6ZMZ3 975 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 DRC1Q96MC2 740 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 DBNDD2Q9BQY9 259 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 ROBO2Q9HCK4 1378 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 FDPSP14324 419 aaKnown RBP17.14■□□□□ 0.33
CLCN1-201ENST00000343257 HOXC9P31274 260 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 CPLX3Q8WVH0 158 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 CCDC102AQ96A19 550 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 C8orf76Q96K31 380 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 BAG1Q99933 345 aaPredicted RBP17.14■□□□□ 0.33
CLCN1-201ENST00000343257 MYL6BP14649 208 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 PDIA3P30101 505 aaKnown RBP17.14■□□□□ 0.33
CLCN1-201ENST00000343257 TSGA10IPQ3SY00 556 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 SPECC1Q5M775 1068 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 NRKQ7Z2Y5 1582 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 GOLGA1Q92805 767 aa17.14■□□□□ 0.33
CLCN1-201ENST00000343257 FAM208AQ9UK61 1670 aaKnown RBP17.13■□□□□ 0.33
CLCN1-201ENST00000343257 KDRP35968 1356 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 MAP3K9P80192 1104 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 MCMDC2Q4G0Z9 681 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 NBPF6Q5VWK0 638 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 NBPF4Q96M43 638 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 SLC26A8Q96RN1 970 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 RNF216Q9NWF9 866 aaPredicted RBP17.13■□□□□ 0.33
CLCN1-201ENST00000343257 RTEL1Q9NZ71 1219 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 MRFAP1Q9Y605 127 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 ZNF609O15014 1411 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 USPL1Q5W0Q7 1092 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 KSR2Q6VAB6 950 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 NEUROD6Q96NK8 337 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 PXDNLA1KZ92 1463 aa17.13■□□□□ 0.33
CLCN1-201ENST00000343257 USP6P35125 1406 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 KIF28PB7ZC32 967 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 WDHD1O75717 1129 aaPredicted RBP17.12■□□□□ 0.33
CLCN1-201ENST00000343257 CLIC6Q96NY7 704 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 LLPHQ9BRT6 129 aaKnown RBP17.12■□□□□ 0.33
CLCN1-201ENST00000343257 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
CLCN1-201ENST00000343257 NEDD4P46934 1319 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 CARMIL3Q8ND23 1372 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 GOLIM4O00461 696 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 SART3Q15020 963 aaKnown RBP17.12■□□□□ 0.33
CLCN1-201ENST00000343257 TRMT44Q8IYL2 757 aaKnown RBP17.12■□□□□ 0.33
CLCN1-201ENST00000343257 EXOC4Q96A65 974 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 ATG3Q9NT62 314 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 MROH7-TTC4A0A0A0MT08 1334 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 PSME1Q06323 249 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 RIC3Q7Z5B4 369 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 VSTM4Q8IW00 320 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 AIFM3Q96NN9 605 aa17.12■□□□□ 0.33
CLCN1-201ENST00000343257 C3P01024 1663 aa17.11■□□□□ 0.33
CLCN1-201ENST00000343257 FOXN1O15353 648 aa17.11■□□□□ 0.33
CLCN1-201ENST00000343257 SYKP43405 635 aa17.11■□□□□ 0.33
CLCN1-201ENST00000343257 MYL5Q02045 173 aa17.11■□□□□ 0.33
CLCN1-201ENST00000343257 TAF7LQ5H9L4 462 aa17.11■□□□□ 0.33
CLCN1-201ENST00000343257 RSRC2Q7L4I2 434 aaKnown RBP17.11■□□□□ 0.33
CLCN1-201ENST00000343257 PACS2Q86VP3 889 aa17.11■□□□□ 0.33
CLCN1-201ENST00000343257 MPHOSPH8Q99549 860 aa17.11■□□□□ 0.33
CLCN1-201ENST00000343257 LOC102724159A0A0B4J2E5 919 aa17.11■□□□□ 0.33
CLCN1-201ENST00000343257 PWP2Q15269 919 aaKnown RBP17.11■□□□□ 0.33
CLCN1-201ENST00000343257 ZNF827Q17R98 1081 aa17.11■□□□□ 0.33
CLCN1-201ENST00000343257 GPATCH11Q8N954 259 aa17.11■□□□□ 0.33
CLCN1-201ENST00000343257 MRPL44Q9H9J2 332 aaKnown RBP17.11■□□□□ 0.33
CLCN1-201ENST00000343257 EFCC1Q9HA90 598 aa17.11■□□□□ 0.33
CLCN1-201ENST00000343257 SNRKQ9NRH2 765 aa17.11■□□□□ 0.33
CLCN1-201ENST00000343257 E7EWF7 191 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 ATP8B1O43520 1251 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 TUBB4AP04350 444 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 TXLNAP40222 546 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 MYSM1Q5VVJ2 828 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 PNKPQ96T60 521 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 INTS13Q9NVM9 706 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 A2ML1A8K2U0 1454 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 ARHGAP6O43182 974 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 CBFA2T2O43439 604 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 CHMP4BP1P59074 171 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 PDE4BQ07343 736 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 E2F4Q16254 413 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 JAKMIP3Q5VZ66 844 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 ABCB6Q9NP58 842 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 PLEKHG3A1L390 1219 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 RXRAP19793 462 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 KCNJ6P48051 423 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 HSP90AB3PQ58FF7 597 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 TMEM139Q8IV31 216 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 GOLGA6L1Q8N7Z2 621 aa17.1■□□□□ 0.33
CLCN1-201ENST00000343257 KCNG4Q8TDN1 519 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms