RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 AKNAD1Q5T1N1 836 aa17.02■□□□□ 0.32
UBE3B-202ENST00000342494 LARGE2Q8N3Y3 721 aa17.02■□□□□ 0.32
UBE3B-202ENST00000342494 BBXQ8WY36 941 aaPredicted RBP17.02■□□□□ 0.32
UBE3B-202ENST00000342494 MCM7P33993 719 aa17.02■□□□□ 0.32
UBE3B-202ENST00000342494 GNG11P61952 73 aa17.02■□□□□ 0.32
UBE3B-202ENST00000342494 GIMAP6Q6P9H5 292 aa17.02■□□□□ 0.32
UBE3B-202ENST00000342494 MAP3K19Q56UN5 1328 aa17.02■□□□□ 0.32
UBE3B-202ENST00000342494 HCLS1P14317 486 aaPredicted RBP17.02■□□□□ 0.32
UBE3B-202ENST00000342494 SYCP2Q9BX26 1530 aa17.02■□□□□ 0.31
UBE3B-202ENST00000342494 YTHDC2Q9H6S0 1430 aaKnown RBP17.02■□□□□ 0.31
UBE3B-202ENST00000342494 ERICH4A6NGS2 130 aa17.02■□□□□ 0.31
UBE3B-202ENST00000342494 GJC1P36383 396 aa17.02■□□□□ 0.31
UBE3B-202ENST00000342494 BRDTQ58F21 947 aaPredicted RBP17.02■□□□□ 0.31
UBE3B-202ENST00000342494 OTUD6BQ8N6M0 293 aa17.02■□□□□ 0.31
UBE3B-202ENST00000342494 KAT6BQ8WYB5 2073 aa17.02■□□□□ 0.31
UBE3B-202ENST00000342494 ARL1P40616 181 aaPredicted RBP17.01■□□□□ 0.31
UBE3B-202ENST00000342494 ITGA6P23229 1130 aa17.01■□□□□ 0.31
UBE3B-202ENST00000342494 PRPHP41219 470 aa17.01■□□□□ 0.31
UBE3B-202ENST00000342494 APBB1IPQ7Z5R6 666 aaPredicted RBP17.01■□□□□ 0.31
UBE3B-202ENST00000342494 BEGAINQ9BUH8 593 aa17.01■□□□□ 0.31
UBE3B-202ENST00000342494 EEF2P13639 858 aaKnown RBP17.01■□□□□ 0.31
UBE3B-202ENST00000342494 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
UBE3B-202ENST00000342494 TBC1D32Q96NH3 1257 aa17.01■□□□□ 0.31
UBE3B-202ENST00000342494 PKD2L1Q9P0L9 805 aa17.01■□□□□ 0.31
UBE3B-202ENST00000342494 IVNS1ABPQ9Y6Y0 642 aa17.01■□□□□ 0.31
UBE3B-202ENST00000342494 ARHGEF10LQ9HCE6 1279 aa17.01■□□□□ 0.31
UBE3B-202ENST00000342494 SPTLC2O15270 562 aa17.01■□□□□ 0.31
UBE3B-202ENST00000342494 DPP8Q6V1X1 898 aaPredicted RBP17.01■□□□□ 0.31
UBE3B-202ENST00000342494 RBM28Q9NW13 759 aaKnown RBP17.01■□□□□ 0.31
UBE3B-202ENST00000342494 MAST3O60307 1309 aa17.01■□□□□ 0.31
UBE3B-202ENST00000342494 APOBRQ0VD83 1088 aa17■□□□□ 0.31
UBE3B-202ENST00000342494 MSANTD4Q8NCY6 345 aa17■□□□□ 0.31
UBE3B-202ENST00000342494 NAP1L4Q99733 375 aaKnown RBP17■□□□□ 0.31
UBE3B-202ENST00000342494 ZNF790Q6PG37 636 aa17■□□□□ 0.31
UBE3B-202ENST00000342494 DTHD1Q6ZMT9 781 aa17■□□□□ 0.31
UBE3B-202ENST00000342494 PLBD2Q8NHP8 589 aa17■□□□□ 0.31
UBE3B-202ENST00000342494 PUS7Q96PZ0 661 aaKnown RBP17■□□□□ 0.31
UBE3B-202ENST00000342494 CNPY2Q9Y2B0 182 aa17■□□□□ 0.31
UBE3B-202ENST00000342494 CEP83Q9Y592 693 aa17■□□□□ 0.31
UBE3B-202ENST00000342494 CCDC171Q6TFL3 1326 aa17■□□□□ 0.31
UBE3B-202ENST00000342494 NUP160Q12769 1436 aa17■□□□□ 0.31
UBE3B-202ENST00000342494 ARID5AQ03989 594 aa17■□□□□ 0.31
UBE3B-202ENST00000342494 TSPYL6Q8N831 410 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 SREK1Q8WXA9 508 aaKnown RBP16.99■□□□□ 0.31
UBE3B-202ENST00000342494 PCDHB15Q9Y5E8 787 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 ABCC10Q5T3U5 1492 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 GPCPD1Q9NPB8 672 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 GPHNQ9NQX3 736 aaPredicted RBP16.99■□□□□ 0.31
UBE3B-202ENST00000342494 CEP85Q6P2H3 762 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 CCDC117Q8IWD4 279 aaPredicted RBP16.99■□□□□ 0.31
UBE3B-202ENST00000342494 ZKSCAN3Q9BRR0 538 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 RAPGEF6Q8TEU7 1601 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 RXRAP19793 462 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 PUM3Q15397 648 aaKnown RBP16.99■□□□□ 0.31
UBE3B-202ENST00000342494 SELENOOQ9BVL4 669 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 TRAPPC8Q9Y2L5 1435 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 BICDL2A1A5D9 508 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 VAMP4O75379 141 aa16.99■□□□□ 0.31
UBE3B-202ENST00000342494 DHX32Q7L7V1 743 aaKnown RBP16.99■□□□□ 0.31
UBE3B-202ENST00000342494 PDE8AO60658 829 aa16.98■□□□□ 0.31
UBE3B-202ENST00000342494 CREB3L3Q68CJ9 461 aa16.98■□□□□ 0.31
UBE3B-202ENST00000342494 CTR9Q6PD62 1173 aa16.98■□□□□ 0.31
UBE3B-202ENST00000342494 HOOK2Q96ED9 719 aa16.98■□□□□ 0.31
UBE3B-202ENST00000342494 ZSWIM4Q9H7M6 989 aa16.98■□□□□ 0.31
UBE3B-202ENST00000342494 CKAP4Q07065 602 aaKnown RBP16.98■□□□□ 0.31
UBE3B-202ENST00000342494 UVSSAQ2YD98 709 aa16.98■□□□□ 0.31
UBE3B-202ENST00000342494 GTPBP4Q9BZE4 634 aaKnown RBP16.98■□□□□ 0.31
UBE3B-202ENST00000342494 EYA2O00167 538 aa16.98■□□□□ 0.31
UBE3B-202ENST00000342494 PTGS1P23219 599 aa16.98■□□□□ 0.31
UBE3B-202ENST00000342494 PRIM1P49642 420 aaKnown RBP16.98■□□□□ 0.31
UBE3B-202ENST00000342494 ORAI2Q96SN7 254 aa16.98■□□□□ 0.31
UBE3B-202ENST00000342494 IQCGQ9H095 443 aaKnown RBP16.98■□□□□ 0.31
UBE3B-202ENST00000342494 SOS1Q07889 1333 aaPredicted RBP16.98■□□□□ 0.31
UBE3B-202ENST00000342494 FCHSD1Q86WN1 690 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 SUPT20HQ8NEM7 779 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 PHACTR3Q96KR7 559 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 USP21Q9UK80 565 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 PDE6BP35913 854 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 PLCB3Q01970 1234 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 CCDC155Q8N6L0 562 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 CEP112Q8N8E3 955 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 CCDC87Q9NVE4 849 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 APBA3O96018 575 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 BAG6P46379 1132 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 ANO6Q4KMQ2 910 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 ZFYVE9O95405 1425 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 RTL1A6NKG5 1358 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 POLR3AO14802 1390 aaPredicted RBP16.97■□□□□ 0.31
UBE3B-202ENST00000342494 A0A1B0GUL7 405 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 A0A1W2PRG0 241 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 PPM1EQ8WY54 764 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 RASAL2Q9UJF2 1139 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 F13A1P00488 732 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 DACT1Q9NYF0 836 aa16.97■□□□□ 0.31
UBE3B-202ENST00000342494 PTPDC1A2A3K4 754 aa16.96■□□□□ 0.31
UBE3B-202ENST00000342494 ZYXQ15942 572 aaKnown RBP16.96■□□□□ 0.31
UBE3B-202ENST00000342494 RNF187Q5TA31 235 aaPredicted RBP16.96■□□□□ 0.31
UBE3B-202ENST00000342494 GSTA5Q7RTV2 222 aa16.96■□□□□ 0.31
UBE3B-202ENST00000342494 TMEM110-MUSTN1A8MSY1 372 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms