RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 ZAP70P43403 619 aa17.4■□□□□ 0.38
PBX3-201ENST00000342287 TFCP2L1Q9NZI6 479 aa17.4■□□□□ 0.38
PBX3-201ENST00000342287 SPEF2Q9C093 1822 aa17.39■□□□□ 0.38
PBX3-201ENST00000342287 RNF113AO15541 343 aaKnown RBP17.39■□□□□ 0.37
PBX3-201ENST00000342287 ARID4AP29374 1257 aaPredicted RBP17.39■□□□□ 0.37
PBX3-201ENST00000342287 MCAMP43121 646 aa17.39■□□□□ 0.37
PBX3-201ENST00000342287 RPS8P62241 208 aaKnown RBP17.39■□□□□ 0.37
PBX3-201ENST00000342287 ZNF589Q86UQ0 364 aaPredicted RBP17.39■□□□□ 0.37
PBX3-201ENST00000342287 CELF1Q92879 486 aaKnown RBP17.39■□□□□ 0.37
PBX3-201ENST00000342287 GBP4Q96PP9 640 aa17.39■□□□□ 0.37
PBX3-201ENST00000342287 SNX14Q9Y5W7 946 aa17.39■□□□□ 0.37
PBX3-201ENST00000342287 TM4SF1P30408 202 aa17.39■□□□□ 0.37
PBX3-201ENST00000342287 NECTIN1Q15223 517 aa17.39■□□□□ 0.37
PBX3-201ENST00000342287 PHKA1P46020 1223 aa17.38■□□□□ 0.37
PBX3-201ENST00000342287 CNPY4Q8N129 248 aa17.38■□□□□ 0.37
PBX3-201ENST00000342287 MINPP1Q9UNW1 487 aa17.38■□□□□ 0.37
PBX3-201ENST00000342287 RBM8AQ9Y5S9 174 aaKnown RBP17.38■□□□□ 0.37
PBX3-201ENST00000342287 TTF1Q15361 905 aaPredicted RBP17.38■□□□□ 0.37
PBX3-201ENST00000342287 ZMYM1Q5SVZ6 1142 aa17.38■□□□□ 0.37
PBX3-201ENST00000342287 KCNB2Q92953 911 aa17.38■□□□□ 0.37
PBX3-201ENST00000342287 AKT1S1Q96B36 256 aa17.38■□□□□ 0.37
PBX3-201ENST00000342287 SNAP23O00161 211 aa17.37■□□□□ 0.37
PBX3-201ENST00000342287 CHGBP05060 677 aa17.37■□□□□ 0.37
PBX3-201ENST00000342287 ZFYP08048 801 aaPredicted RBP17.37■□□□□ 0.37
PBX3-201ENST00000342287 PRPF40BQ6NWY9 871 aaKnown RBP17.37■□□□□ 0.37
PBX3-201ENST00000342287 RASEFQ8IZ41 740 aa17.37■□□□□ 0.37
PBX3-201ENST00000342287 SERPINB2P05120 415 aa17.37■□□□□ 0.37
PBX3-201ENST00000342287 MCM2P49736 904 aa17.37■□□□□ 0.37
PBX3-201ENST00000342287 PRR5LQ6MZQ0 368 aa17.37■□□□□ 0.37
PBX3-201ENST00000342287 SEC62Q99442 399 aaKnown RBP17.37■□□□□ 0.37
PBX3-201ENST00000342287 ZKSCAN1P17029 563 aaPredicted RBP17.36■□□□□ 0.37
PBX3-201ENST00000342287 ZNF827Q17R98 1081 aa17.36■□□□□ 0.37
PBX3-201ENST00000342287 PI16Q6UXB8 463 aa17.36■□□□□ 0.37
PBX3-201ENST00000342287 UBE4AQ14139 1066 aa17.36■□□□□ 0.37
PBX3-201ENST00000342287 RNF20Q5VTR2 975 aa17.36■□□□□ 0.37
PBX3-201ENST00000342287 FLAD1Q8NFF5 587 aa17.36■□□□□ 0.37
PBX3-201ENST00000342287 ST5P78524 1137 aa17.35■□□□□ 0.37
PBX3-201ENST00000342287 CREB3L3Q68CJ9 461 aa17.35■□□□□ 0.37
PBX3-201ENST00000342287 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.35■□□□□ 0.37
PBX3-201ENST00000342287 BCCIPQ9P287 314 aaKnown RBP eCLIP17.35■□□□□ 0.37
PBX3-201ENST00000342287 COL4A1P02462 1669 aa17.35■□□□□ 0.37
PBX3-201ENST00000342287 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.35■□□□□ 0.37
PBX3-201ENST00000342287 CYP2E1P05181 493 aaPredicted RBP17.35■□□□□ 0.37
PBX3-201ENST00000342287 U2AF2P26368 475 aaKnown RBP eCLIP17.35■□□□□ 0.37
PBX3-201ENST00000342287 ZSCAN25Q6NSZ9 544 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 CCDC129Q6ZRS4 1044 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 PDCL2Q8N4E4 241 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 TRIM34Q9BYJ4 488 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 HMG20BQ9P0W2 317 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 SPATA5Q8NB90 893 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 UPF3BQ9BZI7 483 aaKnown RBP17.34■□□□□ 0.37
PBX3-201ENST00000342287 ANKRD2Q9GZV1 360 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 ARAP2Q8WZ64 1704 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 SLC27A2O14975 620 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 APPP05067 770 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 BCAMP50895 628 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 SLC20A2Q08357 652 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 SLFNL1Q499Z3 407 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 NLGN1Q8N2Q7 840 aa17.34■□□□□ 0.37
PBX3-201ENST00000342287 DDX49Q9Y6V7 483 aaKnown RBP17.34■□□□□ 0.37
PBX3-201ENST00000342287 U3KPZ7 1027 aaPredicted RBP17.34■□□□□ 0.37
PBX3-201ENST00000342287 COL23A1Q86Y22 540 aaPredicted RBP17.33■□□□□ 0.36
PBX3-201ENST00000342287 TM6SF1Q9BZW5 370 aa17.33■□□□□ 0.36
PBX3-201ENST00000342287 MYCNP04198 464 aaPredicted RBP17.33■□□□□ 0.36
PBX3-201ENST00000342287 POLRMTO00411 1230 aaKnown RBP17.32■□□□□ 0.36
PBX3-201ENST00000342287 RASGRF1Q13972 1273 aa17.32■□□□□ 0.36
PBX3-201ENST00000342287 WASHC4Q2M389 1173 aa17.32■□□□□ 0.36
PBX3-201ENST00000342287 CASZ1Q86V15 1759 aa17.32■□□□□ 0.36
PBX3-201ENST00000342287 MAST3O60307 1309 aa17.32■□□□□ 0.36
PBX3-201ENST00000342287 MCM5P33992 734 aa17.32■□□□□ 0.36
PBX3-201ENST00000342287 DDR1Q08345 913 aa17.32■□□□□ 0.36
PBX3-201ENST00000342287 GRAPQ13588 217 aa17.32■□□□□ 0.36
PBX3-201ENST00000342287 GRAPLQ8TC17 118 aaPredicted RBP17.32■□□□□ 0.36
PBX3-201ENST00000342287 APPBP2Q92624 585 aa17.32■□□□□ 0.36
PBX3-201ENST00000342287 OSBP2Q969R2 916 aa17.32■□□□□ 0.36
PBX3-201ENST00000342287 DSCC1Q9BVC3 393 aa17.32■□□□□ 0.36
PBX3-201ENST00000342287 PIH1D3Q9NQM4 214 aaKnown RBP17.32■□□□□ 0.36
PBX3-201ENST00000342287 GNL3LQ9NVN8 582 aaKnown RBP17.32■□□□□ 0.36
PBX3-201ENST00000342287 PSMA5P28066 241 aa17.31■□□□□ 0.36
PBX3-201ENST00000342287 DDIT3P35638 169 aa17.31■□□□□ 0.36
PBX3-201ENST00000342287 TSGA10IPQ3SY00 556 aa17.31■□□□□ 0.36
PBX3-201ENST00000342287 CAVIN4Q5BKX8 364 aa17.31■□□□□ 0.36
PBX3-201ENST00000342287 RPGRQ92834 1020 aaKnown RBP17.31■□□□□ 0.36
PBX3-201ENST00000342287 AKAP11Q9UKA4 1901 aa17.31■□□□□ 0.36
PBX3-201ENST00000342287 CASTP20810 708 aaKnown RBP17.31■□□□□ 0.36
PBX3-201ENST00000342287 CRY2Q49AN0 593 aa17.31■□□□□ 0.36
PBX3-201ENST00000342287 SLC9C2Q5TAH2 1124 aa17.31■□□□□ 0.36
PBX3-201ENST00000342287 PDLIM2Q96JY6 352 aa17.31■□□□□ 0.36
PBX3-201ENST00000342287 JAKMIP1Q96N16 626 aaKnown RBP17.31■□□□□ 0.36
PBX3-201ENST00000342287 ZSWIM6Q9HCJ5 1215 aa17.31■□□□□ 0.36
PBX3-201ENST00000342287 M0R2C6 588 aa17.3■□□□□ 0.36
PBX3-201ENST00000342287 IDH1O75874 414 aaKnown RBP17.3■□□□□ 0.36
PBX3-201ENST00000342287 ADCK5Q3MIX3 580 aa17.3■□□□□ 0.36
PBX3-201ENST00000342287 KIF3AQ9Y496 699 aa17.3■□□□□ 0.36
PBX3-201ENST00000342287 TAF1P21675 1872 aa17.3■□□□□ 0.36
PBX3-201ENST00000342287 ADD2P35612 726 aa17.3■□□□□ 0.36
PBX3-201ENST00000342287 TIGD1Q96MW7 591 aa17.3■□□□□ 0.36
PBX3-201ENST00000342287 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
PBX3-201ENST00000342287 CIZ1Q9ULV3 898 aaPredicted RBP17.3■□□□□ 0.36
PBX3-201ENST00000342287 CYP46A1Q9Y6A2 500 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms