RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 MYL10Q9BUA6 226 aa16.75■□□□□ 0.27
CPSF7-201ENST00000340437 IDH1O75874 414 aaKnown RBP16.74■□□□□ 0.27
CPSF7-201ENST00000340437 ZAP70P43403 619 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 FOXO4P98177 505 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 NFXL1Q6ZNB6 911 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 ANKRD7Q92527 254 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 LLPHQ9BRT6 129 aaKnown RBP16.74■□□□□ 0.27
CPSF7-201ENST00000340437 HELLSQ9NRZ9 838 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 CARMIL3Q8ND23 1372 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 EYA2O00167 538 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 FGAP02671 866 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 SCARF1Q14162 830 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 MICU3Q86XE3 530 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 PHKBQ93100 1093 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 IL15P40933 162 aaPredicted RBP16.74■□□□□ 0.27
CPSF7-201ENST00000340437 EXOSC10Q01780 885 aaKnown RBP16.74■□□□□ 0.27
CPSF7-201ENST00000340437 DCAF5Q96JK2 942 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 INCENPQ9NQS7 918 aa16.74■□□□□ 0.27
CPSF7-201ENST00000340437 CTIFO43310 598 aaKnown RBP16.73■□□□□ 0.27
CPSF7-201ENST00000340437 KIF18AQ8NI77 898 aa16.73■□□□□ 0.27
CPSF7-201ENST00000340437 HEG1Q9ULI3 1381 aa16.73■□□□□ 0.27
CPSF7-201ENST00000340437 SERPINC1P01008 464 aa16.73■□□□□ 0.27
CPSF7-201ENST00000340437 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
CPSF7-201ENST00000340437 PUS7LQ9H0K6 701 aaKnown RBP16.73■□□□□ 0.27
CPSF7-201ENST00000340437 ZNF213O14771 459 aa16.73■□□□□ 0.27
CPSF7-201ENST00000340437 SFPQP23246 707 aaKnown RBP eCLIP16.73■□□□□ 0.27
CPSF7-201ENST00000340437 DSCC1Q9BVC3 393 aa16.73■□□□□ 0.27
CPSF7-201ENST00000340437 ZNF202O95125 648 aa16.72■□□□□ 0.27
CPSF7-201ENST00000340437 ATP1A3P13637 1013 aa16.72■□□□□ 0.27
CPSF7-201ENST00000340437 PDILTQ8N807 584 aa16.72■□□□□ 0.27
CPSF7-201ENST00000340437 XAGE2Q96GT9 111 aa16.72■□□□□ 0.27
CPSF7-201ENST00000340437 MRFAP1L1Q96HT8 127 aa16.72■□□□□ 0.27
CPSF7-201ENST00000340437 TRDNQ13061 729 aa16.72■□□□□ 0.27
CPSF7-201ENST00000340437 RRP12Q5JTH9 1297 aaKnown RBP16.72■□□□□ 0.27
CPSF7-201ENST00000340437 KIAA1468Q9P260 1216 aa16.72■□□□□ 0.27
CPSF7-201ENST00000340437 KIF28PB7ZC32 967 aa16.72■□□□□ 0.27
CPSF7-201ENST00000340437 RABL6Q3YEC7 729 aaPredicted RBP16.72■□□□□ 0.27
CPSF7-201ENST00000340437 ENGASEQ8NFI3 743 aa16.72■□□□□ 0.27
CPSF7-201ENST00000340437 CLIC6Q96NY7 704 aa16.72■□□□□ 0.27
CPSF7-201ENST00000340437 TPM4P67936 248 aa16.71■□□□□ 0.27
CPSF7-201ENST00000340437 CFAP100Q494V2 611 aa16.71■□□□□ 0.27
CPSF7-201ENST00000340437 CCAR2Q8N163 923 aaKnown RBP16.71■□□□□ 0.27
CPSF7-201ENST00000340437 LINC00301Q8NCQ3 95 aa16.71■□□□□ 0.27
CPSF7-201ENST00000340437 ERICH4A6NGS2 130 aa16.71■□□□□ 0.27
CPSF7-201ENST00000340437 CCZ1BP86790 482 aa16.71■□□□□ 0.27
CPSF7-201ENST00000340437 CCZ1P86791 482 aaPredicted RBP16.71■□□□□ 0.27
CPSF7-201ENST00000340437 FMR1NBQ8N0W7 255 aaPredicted RBP16.71■□□□□ 0.27
CPSF7-201ENST00000340437 HELBQ8NG08 1087 aaPredicted RBP16.71■□□□□ 0.27
CPSF7-201ENST00000340437 KDM6AO15550 1401 aaPredicted RBP16.71■□□□□ 0.27
CPSF7-201ENST00000340437 CAVIN2O95810 425 aa16.71■□□□□ 0.26
CPSF7-201ENST00000340437 CGNQ9P2M7 1197 aaKnown RBP16.71■□□□□ 0.26
CPSF7-201ENST00000340437 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
CPSF7-201ENST00000340437 UBE2Q2LH0YL09 131 aa16.7■□□□□ 0.26
CPSF7-201ENST00000340437 MYSM1Q5VVJ2 828 aa16.7■□□□□ 0.26
CPSF7-201ENST00000340437 ADALQ6DHV7 355 aa16.7■□□□□ 0.26
CPSF7-201ENST00000340437 ARHGAP23Q9P227 1491 aa16.7■□□□□ 0.26
CPSF7-201ENST00000340437 ERCC6LQ2NKX8 1250 aa16.7■□□□□ 0.26
CPSF7-201ENST00000340437 METTL24Q5JXM2 366 aa16.7■□□□□ 0.26
CPSF7-201ENST00000340437 CTNNA3Q9UI47 895 aa16.7■□□□□ 0.26
CPSF7-201ENST00000340437 ZNF274Q96GC6 653 aaPredicted RBP16.69■□□□□ 0.26
CPSF7-201ENST00000340437 ALG1Q9BT22 464 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 ST7Q9NRC1 585 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 NRDCO43847 1150 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 PFKFB1P16118 471 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 PNOCQ13519 176 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 DNAI1Q9UI46 699 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 NFAT5O94916 1531 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 H7C1W4 665 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 GPAA1O43292 621 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 DHX16O60231 1041 aaKnown RBP16.69■□□□□ 0.26
CPSF7-201ENST00000340437 LRP10Q7Z4F1 713 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 LRRN4CLQ8ND94 238 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 NCOA7Q8NI08 942 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 PRDM11Q9NQV5 511 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 OGFRQ9NZT2 677 aa16.69■□□□□ 0.26
CPSF7-201ENST00000340437 KMT5BQ4FZB7 885 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 SLC9C2Q5TAH2 1124 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 CNNM1Q9NRU3 951 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 SLIT1O75093 1534 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 B4E1Z4 1266 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 SYKP43405 635 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 CASP7P55210 303 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 ANO1Q5XXA6 986 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 FBXO18Q8NFZ0 1043 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 SENP2Q9HC62 589 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 NCAPD2Q15021 1401 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 SARM1Q6SZW1 724 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 CREBRFQ8IUR6 639 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 CMTR1Q8N1G2 835 aaKnown RBP16.68■□□□□ 0.26
CPSF7-201ENST00000340437 RTEL1Q9NZ71 1219 aa16.68■□□□□ 0.26
CPSF7-201ENST00000340437 NEMFO60524 1076 aa16.67■□□□□ 0.26
CPSF7-201ENST00000340437 NBPF11Q86T75 865 aa16.67■□□□□ 0.26
CPSF7-201ENST00000340437 KCNG4Q8TDN1 519 aa16.67■□□□□ 0.26
CPSF7-201ENST00000340437 WDHD1O75717 1129 aaPredicted RBP16.67■□□□□ 0.26
CPSF7-201ENST00000340437 CDC25BP30305 580 aa16.67■□□□□ 0.26
CPSF7-201ENST00000340437 ARMCX5Q6P1M9 558 aa16.67■□□□□ 0.26
CPSF7-201ENST00000340437 FBXO38Q6PIJ6 1188 aa16.67■□□□□ 0.26
CPSF7-201ENST00000340437 LDHAL6AQ6ZMR3 332 aa16.67■□□□□ 0.26
CPSF7-201ENST00000340437 ZKSCAN3Q9BRR0 538 aa16.67■□□□□ 0.26
CPSF7-201ENST00000340437 URI1O94763 535 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms