RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 RIC1Q4ADV7 1423 aa27.39■■□□□ 1.98
NDEL1-201ENST00000334527 PRC1O43663 620 aa27.38■■□□□ 1.97
NDEL1-201ENST00000334527 CAVIN2O95810 425 aa27.38■■□□□ 1.97
NDEL1-201ENST00000334527 ZNF75DP51815 510 aa27.38■■□□□ 1.97
NDEL1-201ENST00000334527 PLA2G4DQ86XP0 818 aa27.38■■□□□ 1.97
NDEL1-201ENST00000334527 DRC7Q8IY82 874 aa27.38■■□□□ 1.97
NDEL1-201ENST00000334527 MAP3K15Q6ZN16 1313 aa27.38■■□□□ 1.97
NDEL1-201ENST00000334527 ABCC12Q96J65 1359 aa27.38■■□□□ 1.97
NDEL1-201ENST00000334527 CTAGE5O15320 804 aa27.38■■□□□ 1.97
NDEL1-201ENST00000334527 GIGYF2Q6Y7W6 1299 aaKnown RBP27.38■■□□□ 1.97
NDEL1-201ENST00000334527 GPTP24298 496 aa27.37■■□□□ 1.97
NDEL1-201ENST00000334527 ME1P48163 572 aa27.37■■□□□ 1.97
NDEL1-201ENST00000334527 SNW1Q13573 536 aaKnown RBP27.37■■□□□ 1.97
NDEL1-201ENST00000334527 MB21D2Q8IYB1 491 aaPredicted RBP27.37■■□□□ 1.97
NDEL1-201ENST00000334527 GPAA1O43292 621 aa27.36■■□□□ 1.97
NDEL1-201ENST00000334527 HLFQ16534 295 aa27.36■■□□□ 1.97
NDEL1-201ENST00000334527 LDHAL6AQ6ZMR3 332 aa27.36■■□□□ 1.97
NDEL1-201ENST00000334527 RIPOR2Q9Y4F9 1068 aa27.36■■□□□ 1.97
NDEL1-201ENST00000334527 MYH7P12883 1935 aa27.36■■□□□ 1.97
NDEL1-201ENST00000334527 KLF18A0A0U1RQI7 1052 aa27.36■■□□□ 1.97
NDEL1-201ENST00000334527 PRKCSHP14314 528 aaPredicted RBP27.36■■□□□ 1.97
NDEL1-201ENST00000334527 ITGA6P23229 1130 aa27.36■■□□□ 1.97
NDEL1-201ENST00000334527 CCDC186Q7Z3E2 898 aa27.36■■□□□ 1.97
NDEL1-201ENST00000334527 CDHR2Q9BYE9 1310 aa27.35■■□□□ 1.97
NDEL1-201ENST00000334527 GOLGA8BA8MQT2 603 aa27.35■■□□□ 1.97
NDEL1-201ENST00000334527 KINO60870 393 aaKnown RBP27.35■■□□□ 1.97
NDEL1-201ENST00000334527 FAM160A1Q05DH4 1040 aa27.35■■□□□ 1.97
NDEL1-201ENST00000334527 GLIPR1L2Q4G1C9 344 aa27.35■■□□□ 1.97
NDEL1-201ENST00000334527 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.35■■□□□ 1.97
NDEL1-201ENST00000334527 NCOA7Q8NI08 942 aa27.35■■□□□ 1.97
NDEL1-201ENST00000334527 GREM2Q9H772 168 aa27.35■■□□□ 1.97
NDEL1-201ENST00000334527 ZNF213O14771 459 aa27.35■■□□□ 1.97
NDEL1-201ENST00000334527 MCAMP43121 646 aa27.35■■□□□ 1.97
NDEL1-201ENST00000334527 RALYLQ86SE5 291 aaKnown RBP27.35■■□□□ 1.97
NDEL1-201ENST00000334527 NLRP10Q86W26 655 aa27.35■■□□□ 1.97
NDEL1-201ENST00000334527 TTLL11Q8NHH1 800 aa27.35■■□□□ 1.97
NDEL1-201ENST00000334527 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.35■■□□□ 1.971e-7■□□□□ 10.8
NDEL1-201ENST00000334527 STX1AQ16623 288 aa27.34■■□□□ 1.97
NDEL1-201ENST00000334527 C11orf57Q6ZUT1 292 aaPredicted RBP27.34■■□□□ 1.97
NDEL1-201ENST00000334527 FSIP1Q8NA03 581 aa27.34■■□□□ 1.97
NDEL1-201ENST00000334527 ENGASEQ8NFI3 743 aa27.34■■□□□ 1.97
NDEL1-201ENST00000334527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.34■■□□□ 1.97
NDEL1-201ENST00000334527 DHX16O60231 1041 aaKnown RBP27.34■■□□□ 1.97
NDEL1-201ENST00000334527 ANTXR2P58335 489 aa27.34■■□□□ 1.97
NDEL1-201ENST00000334527 OTUD7BQ6GQQ9 843 aa27.34■■□□□ 1.97
NDEL1-201ENST00000334527 MAP7D2Q96T17 732 aa27.34■■□□□ 1.97
NDEL1-201ENST00000334527 NRBP1Q9UHY1 535 aa27.34■■□□□ 1.97
NDEL1-201ENST00000334527 HPS5Q9UPZ3 1129 aa27.34■■□□□ 1.97
NDEL1-201ENST00000334527 IQCB1Q15051 598 aa27.33■■□□□ 1.97
NDEL1-201ENST00000334527 C8orf76Q96K31 380 aa27.33■■□□□ 1.97
NDEL1-201ENST00000334527 CNNM1Q9NRU3 951 aa27.33■■□□□ 1.97
NDEL1-201ENST00000334527 GOLGA6L19H0YKK7 550 aa27.33■■□□□ 1.96
NDEL1-201ENST00000334527 CTSWP56202 376 aa27.33■■□□□ 1.96
NDEL1-201ENST00000334527 ANKRD18BA2A2Z9 1011 aa27.32■■□□□ 1.96
NDEL1-201ENST00000334527 RAB11FIP4Q86YS3 637 aa27.32■■□□□ 1.96
NDEL1-201ENST00000334527 RTEL1Q9NZ71 1219 aa27.32■■□□□ 1.96
NDEL1-201ENST00000334527 ORC3Q9UBD5 711 aaPredicted RBP27.31■■□□□ 1.96
NDEL1-201ENST00000334527 PCDHA7Q9UN72 937 aa27.31■■□□□ 1.96
NDEL1-201ENST00000334527 CLIP2Q9UDT6 1046 aa27.31■■□□□ 1.96
NDEL1-201ENST00000334527 AKAP11Q9UKA4 1901 aa27.31■■□□□ 1.96
NDEL1-201ENST00000334527 DDX60Q8IY21 1712 aaKnown RBP27.31■■□□□ 1.96
NDEL1-201ENST00000334527 ITGB4P16144 1822 aa27.3■■□□□ 1.96
NDEL1-201ENST00000334527 ADD2P35612 726 aa27.3■■□□□ 1.96
NDEL1-201ENST00000334527 ZSCAN25Q6NSZ9 544 aa27.3■■□□□ 1.96
NDEL1-201ENST00000334527 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.3■■□□□ 1.96
NDEL1-201ENST00000334527 CPLX1O14810 134 aa27.3■■□□□ 1.96
NDEL1-201ENST00000334527 LRMPQ12912 555 aa27.3■■□□□ 1.96
NDEL1-201ENST00000334527 SLC9C2Q5TAH2 1124 aa27.3■■□□□ 1.96
NDEL1-201ENST00000334527 MRPS27Q92552 414 aaKnown RBP27.3■■□□□ 1.96
NDEL1-201ENST00000334527 IRS4O14654 1257 aaPredicted RBP27.29■■□□□ 1.96
NDEL1-201ENST00000334527 POLR3DP05423 398 aaPredicted RBP27.29■■□□□ 1.96
NDEL1-201ENST00000334527 FBXO18Q8NFZ0 1043 aa27.29■■□□□ 1.96
NDEL1-201ENST00000334527 WDR19Q8NEZ3 1342 aa27.29■■□□□ 1.96
NDEL1-201ENST00000334527 GTF2F1P35269 517 aaKnown RBP eCLIP27.28■■□□□ 1.96
NDEL1-201ENST00000334527 ADALQ6DHV7 355 aa27.28■■□□□ 1.96
NDEL1-201ENST00000334527 VGLL2Q8N8G2 317 aa27.28■■□□□ 1.96
NDEL1-201ENST00000334527 CLIC4Q9Y696 253 aa27.28■■□□□ 1.96
NDEL1-201ENST00000334527 TTF1Q15361 905 aaPredicted RBP27.28■■□□□ 1.96
NDEL1-201ENST00000334527 FMR1NBQ8N0W7 255 aaPredicted RBP27.28■■□□□ 1.96
NDEL1-201ENST00000334527 LINC00301Q8NCQ3 95 aa27.28■■□□□ 1.96
NDEL1-201ENST00000334527 ZNF512BQ96KM6 892 aaPredicted RBP27.28■■□□□ 1.96
NDEL1-201ENST00000334527 TRMT112Q9UI30 125 aaKnown RBP27.28■■□□□ 1.96
NDEL1-201ENST00000334527 MYH3P11055 1940 aa27.28■■□□□ 1.96
NDEL1-201ENST00000334527 A0A087WWV3 80 aa27.27■■□□□ 1.96
NDEL1-201ENST00000334527 CYP19A1P11511 503 aaPredicted RBP27.27■■□□□ 1.96
NDEL1-201ENST00000334527 CDC25BP30305 580 aa27.27■■□□□ 1.96
NDEL1-201ENST00000334527 STK38Q15208 465 aa27.27■■□□□ 1.96
NDEL1-201ENST00000334527 SARM1Q6SZW1 724 aa27.27■■□□□ 1.96
NDEL1-201ENST00000334527 NBPF3Q9H094 633 aa27.27■■□□□ 1.96
NDEL1-201ENST00000334527 PIH1D3Q9NQM4 214 aaKnown RBP27.27■■□□□ 1.96
NDEL1-201ENST00000334527 ANO10Q9NW15 660 aa27.27■■□□□ 1.96
NDEL1-201ENST00000334527 ZNF335Q9H4Z2 1342 aaPredicted RBP27.27■■□□□ 1.96
NDEL1-201ENST00000334527 TRDNQ13061 729 aa27.27■■□□□ 1.96
NDEL1-201ENST00000334527 SF3A1Q15459 793 aaKnown RBP27.27■■□□□ 1.96
NDEL1-201ENST00000334527 BTG4Q9NY30 223 aa27.27■■□□□ 1.96
NDEL1-201ENST00000334527 LRP6O75581 1613 aa27.27■■□□□ 1.96
NDEL1-201ENST00000334527 ANKRD36CQ5JPF3 1778 aa27.26■■□□□ 1.95
NDEL1-201ENST00000334527 IDH1O75874 414 aaKnown RBP27.26■■□□□ 1.95
NDEL1-201ENST00000334527 CHAF1AQ13111 956 aaPredicted RBP27.26■■□□□ 1.95
NDEL1-201ENST00000334527 MTERF4Q7Z6M4 381 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms