RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 SYCP3Q8IZU3 236 aa17.23■□□□□ 0.35
C9orf47-201ENST00000334490 B4E1Z4 1266 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 MTIF2P46199 727 aaKnown RBP17.22■□□□□ 0.35
C9orf47-201ENST00000334490 ENOX2Q16206 610 aaKnown RBP17.22■□□□□ 0.35
C9orf47-201ENST00000334490 TBCAO75347 108 aaKnown RBP17.22■□□□□ 0.35
C9orf47-201ENST00000334490 PRDM1O75626 825 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 SPATA5Q8NB90 893 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 ZAP70P43403 619 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 ZBTB1Q9Y2K1 713 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 KDM5CP41229 1560 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 ARHGAP31Q2M1Z3 1444 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 TRIM75PA6NK02 468 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 PPIP5K2O43314 1243 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 CCDC40Q4G0X9 1142 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 RUFY3Q7L099 469 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 KCNG4Q8TDN1 519 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 LRRC27Q9C0I9 530 aa17.22■□□□□ 0.35
C9orf47-201ENST00000334490 NLGN1Q8N2Q7 840 aa17.21■□□□□ 0.35
C9orf47-201ENST00000334490 ZBTB38Q8NAP3 1195 aaPredicted RBP17.21■□□□□ 0.35
C9orf47-201ENST00000334490 BCS1LQ9Y276 419 aa17.21■□□□□ 0.35
C9orf47-201ENST00000334490 RTL1A6NKG5 1358 aa17.21■□□□□ 0.35
C9orf47-201ENST00000334490 TOP1P11387 765 aaKnown RBP17.21■□□□□ 0.35
C9orf47-201ENST00000334490 MARCKSP29966 332 aaPredicted RBP17.21■□□□□ 0.35
C9orf47-201ENST00000334490 NIM1KQ8IY84 436 aa17.21■□□□□ 0.35
C9orf47-201ENST00000334490 ERCC4Q92889 916 aaPredicted RBP17.21■□□□□ 0.35
C9orf47-201ENST00000334490 FAM227BQ96M60 508 aa17.21■□□□□ 0.35
C9orf47-201ENST00000334490 PLA2R1Q13018 1463 aa17.21■□□□□ 0.35
C9orf47-201ENST00000334490 PRKCSHP14314 528 aaPredicted RBP17.21■□□□□ 0.35
C9orf47-201ENST00000334490 CPA1P15085 419 aa17.21■□□□□ 0.35
C9orf47-201ENST00000334490 CETN1Q12798 172 aa17.21■□□□□ 0.35
C9orf47-201ENST00000334490 TEX35Q5T0J7 233 aa17.21■□□□□ 0.35
C9orf47-201ENST00000334490 KRT27Q7Z3Y8 459 aa17.21■□□□□ 0.34
C9orf47-201ENST00000334490 USP26Q9BXU7 913 aa17.21■□□□□ 0.34
C9orf47-201ENST00000334490 SH2D4AQ9H788 454 aa17.21■□□□□ 0.34
C9orf47-201ENST00000334490 MAP3K15Q6ZN16 1313 aa17.2■□□□□ 0.34
C9orf47-201ENST00000334490 PLEKHF1Q96S99 279 aa17.2■□□□□ 0.34
C9orf47-201ENST00000334490 DNAI2Q9GZS0 605 aa17.2■□□□□ 0.34
C9orf47-201ENST00000334490 ZNF408Q9H9D4 720 aa17.2■□□□□ 0.34
C9orf47-201ENST00000334490 PTPDC1A2A3K4 754 aa17.2■□□□□ 0.34
C9orf47-201ENST00000334490 PCCAP05165 728 aaPredicted RBP17.2■□□□□ 0.34
C9orf47-201ENST00000334490 PARP1P09874 1014 aaKnown RBP17.2■□□□□ 0.34
C9orf47-201ENST00000334490 GNA11P29992 359 aa17.2■□□□□ 0.34
C9orf47-201ENST00000334490 SPA17Q15506 151 aa17.2■□□□□ 0.34
C9orf47-201ENST00000334490 UNC5CLQ8IV45 518 aa17.2■□□□□ 0.34
C9orf47-201ENST00000334490 B4DLN1 442 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 AFMP43652 599 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 MRPL12P52815 198 aaKnown RBP17.19■□□□□ 0.34
C9orf47-201ENST00000334490 KCNQ4P56696 695 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 SKIDA1Q1XH10 827 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 VPS36Q86VN1 386 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 TBC1D22AQ8WUA7 517 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 CPLX3Q8WVH0 158 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 FBXO3Q9UK99 471 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 GTF2IP78347 998 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 BLMP54132 1417 aaPredicted RBP17.19■□□□□ 0.34
C9orf47-201ENST00000334490 MAP3K4Q9Y6R4 1608 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 STAT6P42226 847 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 ZNF165P49910 485 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 BEND3Q5T5X7 828 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 SPATA31A3Q5VYP0 1347 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 KDRP35968 1356 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 IL6STP40189 918 aaPredicted RBP17.19■□□□□ 0.34
C9orf47-201ENST00000334490 STX1AQ16623 288 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 PROSER3Q2NL68 480 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 CCDC150Q8NCX0 1101 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 KIF1BO60333 1816 aa17.19■□□□□ 0.34
C9orf47-201ENST00000334490 CCDC112Q8NEF3 446 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 PICK1Q9NRD5 415 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 CNPY2Q9Y2B0 182 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 ANKARQ7Z5J8 1434 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 TAF4BQ92750 862 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 A2ML1A8K2U0 1454 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 TCP10Q12799 353 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 C2CD5Q86YS7 1000 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 SNX21Q969T3 373 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 EXOC1Q9NV70 894 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 AOX1Q06278 1338 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 ZNF532Q9HCE3 1301 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 ERLIN2O94905 339 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 CERS3Q8IU89 383 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 GPCPD1Q9NPB8 672 aa17.18■□□□□ 0.34
C9orf47-201ENST00000334490 F13A1P00488 732 aa17.17■□□□□ 0.34
C9orf47-201ENST00000334490 TNNT3P45378 269 aaPredicted RBP17.17■□□□□ 0.34
C9orf47-201ENST00000334490 TDRD12Q587J7 1177 aaKnown RBP17.17■□□□□ 0.34
C9orf47-201ENST00000334490 VTI1AQ96AJ9 217 aa17.17■□□□□ 0.34
C9orf47-201ENST00000334490 DNM1Q05193 864 aaKnown RBP17.17■□□□□ 0.34
C9orf47-201ENST00000334490 MFSD14BQ5SR56 506 aa17.17■□□□□ 0.34
C9orf47-201ENST00000334490 GIGYF2Q6Y7W6 1299 aaKnown RBP17.17■□□□□ 0.34
C9orf47-201ENST00000334490 ARAP3Q8WWN8 1544 aa17.17■□□□□ 0.34
C9orf47-201ENST00000334490 DLGAP5Q15398 846 aa17.17■□□□□ 0.34
C9orf47-201ENST00000334490 MAPKAPK5Q8IW41 473 aa17.17■□□□□ 0.34
C9orf47-201ENST00000334490 SEPT12Q8IYM1 358 aa17.17■□□□□ 0.34
C9orf47-201ENST00000334490 SSH3Q8TE77 659 aa17.17■□□□□ 0.34
C9orf47-201ENST00000334490 MRPS27Q92552 414 aaKnown RBP17.17■□□□□ 0.34
C9orf47-201ENST00000334490 BICD1Q96G01 975 aa17.17■□□□□ 0.34
C9orf47-201ENST00000334490 NUP88Q99567 741 aaPredicted RBP17.17■□□□□ 0.34
C9orf47-201ENST00000334490 USP25Q9UHP3 1055 aa17.17■□□□□ 0.34
C9orf47-201ENST00000334490 ABCC4O15439 1325 aa17.17■□□□□ 0.34
C9orf47-201ENST00000334490 KRT2P35908 639 aa17.17■□□□□ 0.34
C9orf47-201ENST00000334490 SGSM2O43147 1006 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms