RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 PAXIP1Q6ZW49 1069 aaPredicted RBP18.83■□□□□ 0.6
NSMCE3-201ENST00000332303 ZNF830Q96NB3 372 aaPredicted RBP18.83■□□□□ 0.6
NSMCE3-201ENST00000332303 PER1O15534 1290 aaPredicted RBP18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 KRT83P78385 493 aa18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 IQUBQ8NA54 791 aa18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 SELENOOQ9BVL4 669 aa18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 USP26Q9BXU7 913 aa18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 GTF2F1P35269 517 aaKnown RBP eCLIP18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 CLCN1P35523 988 aa18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 KRT2P35908 639 aa18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 TNNI2P48788 182 aa18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 PRIM1P49642 420 aaKnown RBP18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 KIF5AQ12840 1032 aa18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 ZBTB7BO15156 539 aaPredicted RBP18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 PHACTR2O75167 634 aa18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 HOXB7P09629 217 aa18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 BICC1Q9H694 974 aaKnown RBP18.82■□□□□ 0.6
NSMCE3-201ENST00000332303 BICDL2A1A5D9 508 aa18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 KRT86O43790 486 aa18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 LDHBP07195 334 aaKnown RBP18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 IKBKGQ9Y6K9 419 aa18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 ABCC10Q5T3U5 1492 aa18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 TRPM2O94759 1503 aa18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 BIVM-ERCC5R4GMW8 1640 aa18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 PKNOX2Q96KN3 472 aa18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 CCDC42Q96M95 316 aa18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 IMPG2Q9BZV3 1241 aa18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 PTGS1P23219 599 aa18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 HELLSQ9NRZ9 838 aa18.81■□□□□ 0.6
NSMCE3-201ENST00000332303 KCNA6P17658 529 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 CCDC155Q8N6L0 562 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 TCHPQ9BT92 498 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 SYNCQ9H7C4 482 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 EYA2O00167 538 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 HSF2BPO75031 334 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 GIGYF2Q6Y7W6 1299 aaKnown RBP18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 DTHD1Q6ZMT9 781 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 TMEM87AQ8NBN3 555 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 PRDM10Q9NQV6 1147 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 WDR7Q9Y4E6 1490 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 PEG3Q9GZU2 1588 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 ABCC1P33527 1531 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 PCDH11XQ9BZA7 1347 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 PCDH11YQ9BZA8 1340 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 B4DLN1 442 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 LMAN1P49257 510 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 MRPL12P52815 198 aaKnown RBP18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 TTC12Q9H892 705 aaPredicted RBP18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 NF2P35240 595 aa18.8■□□□□ 0.6
NSMCE3-201ENST00000332303 TTC6Q86TZ1 520 aa18.79■□□□□ 0.6
NSMCE3-201ENST00000332303 LMBR1Q8WVP7 490 aa18.79■□□□□ 0.6
NSMCE3-201ENST00000332303 C8orf37Q96NL8 207 aa18.79■□□□□ 0.6
NSMCE3-201ENST00000332303 EYA3Q99504 573 aa18.79■□□□□ 0.6
NSMCE3-201ENST00000332303 KRT222Q8N1A0 295 aa18.78■□□□□ 0.6
NSMCE3-201ENST00000332303 DRC1Q96MC2 740 aa18.78■□□□□ 0.6
NSMCE3-201ENST00000332303 HS1BP3Q53T59 392 aa18.78■□□□□ 0.6
NSMCE3-201ENST00000332303 COMMD10Q9Y6G5 202 aa18.78■□□□□ 0.6
NSMCE3-201ENST00000332303 ZNF790Q6PG37 636 aa18.78■□□□□ 0.6
NSMCE3-201ENST00000332303 SLU7O95391 586 aaKnown RBP18.77■□□□□ 0.6
NSMCE3-201ENST00000332303 TUBB4BP68371 445 aa18.77■□□□□ 0.6
NSMCE3-201ENST00000332303 PLBD2Q8NHP8 589 aa18.77■□□□□ 0.6
NSMCE3-201ENST00000332303 GIMAP7Q8NHV1 300 aa18.77■□□□□ 0.6
NSMCE3-201ENST00000332303 EIF2AK4Q9P2K8 1649 aaKnown RBP18.77■□□□□ 0.6
NSMCE3-201ENST00000332303 SH3TC1Q8TE82 1336 aa18.77■□□□□ 0.6
NSMCE3-201ENST00000332303 CTAGE9A4FU28 777 aa18.77■□□□□ 0.6
NSMCE3-201ENST00000332303 RBM28Q9NW13 759 aaKnown RBP18.77■□□□□ 0.6
NSMCE3-201ENST00000332303 MBD4O95243 580 aa18.77■□□□□ 0.6
NSMCE3-201ENST00000332303 G2E3Q7L622 706 aa18.77■□□□□ 0.6
NSMCE3-201ENST00000332303 DENND2AQ9ULE3 1009 aa18.77■□□□□ 0.6
NSMCE3-201ENST00000332303 ITSN2Q9NZM3 1697 aa18.77■□□□□ 0.6
NSMCE3-201ENST00000332303 A0A1B0GUL7 405 aa18.77■□□□□ 0.59
NSMCE3-201ENST00000332303 STX17P56962 302 aa18.77■□□□□ 0.59
NSMCE3-201ENST00000332303 TIMM10P62072 90 aa18.77■□□□□ 0.59
NSMCE3-201ENST00000332303 PARP10Q53GL7 1025 aa18.77■□□□□ 0.59
NSMCE3-201ENST00000332303 CCDC77Q9BR77 488 aa18.77■□□□□ 0.59
NSMCE3-201ENST00000332303 NPC1L1Q9UHC9 1359 aa18.77■□□□□ 0.59
NSMCE3-201ENST00000332303 FAM13AO94988 1023 aa18.76■□□□□ 0.59
NSMCE3-201ENST00000332303 RILPL1Q5EBL4 403 aa18.76■□□□□ 0.59
NSMCE3-201ENST00000332303 MCM7P33993 719 aa18.76■□□□□ 0.59
NSMCE3-201ENST00000332303 RASAL2Q9UJF2 1139 aa18.76■□□□□ 0.59
NSMCE3-201ENST00000332303 LUC7L2Q9Y383 392 aaKnown RBP18.76■□□□□ 0.59
NSMCE3-201ENST00000332303 TMEM87BQ96K49 555 aa18.76■□□□□ 0.59
NSMCE3-201ENST00000332303 METTL22Q9BUU2 404 aaPredicted RBP18.76■□□□□ 0.59
NSMCE3-201ENST00000332303 VEZTQ9HBM0 779 aa18.76■□□□□ 0.59
NSMCE3-201ENST00000332303 YTHDC2Q9H6S0 1430 aaKnown RBP18.76■□□□□ 0.59
NSMCE3-201ENST00000332303 NEK11Q8NG66 645 aa18.76■□□□□ 0.59
NSMCE3-201ENST00000332303 FAM89AQ96GI7 184 aa18.76■□□□□ 0.59
NSMCE3-201ENST00000332303 MRVI1Q9Y6F6 885 aa18.76■□□□□ 0.59
NSMCE3-201ENST00000332303 MCM6Q14566 821 aa18.75■□□□□ 0.59
NSMCE3-201ENST00000332303 TSNARE1Q96NA8 513 aa18.75■□□□□ 0.59
NSMCE3-201ENST00000332303 IFNKQ9P0W0 207 aa18.75■□□□□ 0.59
NSMCE3-201ENST00000332303 CHL1O00533 1208 aa18.75■□□□□ 0.59
NSMCE3-201ENST00000332303 RXRAP19793 462 aa18.75■□□□□ 0.59
NSMCE3-201ENST00000332303 ARID5AQ03989 594 aa18.75■□□□□ 0.59
NSMCE3-201ENST00000332303 TFCP2L1Q9NZI6 479 aa18.75■□□□□ 0.59
NSMCE3-201ENST00000332303 ARHGEF12Q9NZN5 1544 aa18.74■□□□□ 0.59
NSMCE3-201ENST00000332303 MYL5Q02045 173 aa18.74■□□□□ 0.59
NSMCE3-201ENST00000332303 JDP2Q8WYK2 163 aa18.74■□□□□ 0.59
NSMCE3-201ENST00000332303 UBXN1Q04323 297 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms