RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 TYRO3Q06418 890 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 MAP3K11Q16584 847 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 NBPF14Q5TI25 921 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 NBPF10Q6P3W6 841 aaKnown RBP11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 CKAP2LQ8IYA6 745 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 NBPF15Q8N660 670 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 GTF3C6Q969F1 213 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 DACT1Q9NYF0 836 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 PYCARDQ9ULZ3 195 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 MYH14Q7Z406 1995 aaKnown RBP11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 CYP19A1P11511 503 aaPredicted RBP11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 ITPK1Q13572 414 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 RABL6Q3YEC7 729 aaPredicted RBP11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 SLFNL1Q499Z3 407 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 DDX46Q7L014 1031 aaKnown RBP11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 RETREG2Q8NC44 543 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 LEO1Q8WVC0 666 aaPredicted RBP11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 TSC1Q92574 1164 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 SPATA32Q96LK8 384 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 LRRC2Q9BYS8 371 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 ZNF330Q9Y3S2 320 aaPredicted RBP11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 LY75O60449 1722 aa11.88□□□□□ -0.51
PRAMEF1-201ENST00000332296 CYP21A2P08686 494 aa11.87□□□□□ -0.51
PRAMEF1-201ENST00000332296 Q6ZUG5 572 aa11.87□□□□□ -0.51
PRAMEF1-201ENST00000332296 STOX1Q6ZVD7 989 aa11.87□□□□□ -0.51
PRAMEF1-201ENST00000332296 LUZP1Q86V48 1076 aa11.87□□□□□ -0.51
PRAMEF1-201ENST00000332296 MYRIPQ8NFW9 859 aa11.87□□□□□ -0.51
PRAMEF1-201ENST00000332296 FAM200AQ8TCP9 573 aa11.87□□□□□ -0.51
PRAMEF1-201ENST00000332296 BRF1Q92994 677 aa11.87□□□□□ -0.51
PRAMEF1-201ENST00000332296 SPTLC3Q9NUV7 552 aa11.87□□□□□ -0.51
PRAMEF1-201ENST00000332296 RFX7Q2KHR2 1363 aa11.87□□□□□ -0.51
PRAMEF1-201ENST00000332296 RESTQ13127 1097 aa11.86□□□□□ -0.51
PRAMEF1-201ENST00000332296 IRF5Q13568 498 aa11.86□□□□□ -0.51
PRAMEF1-201ENST00000332296 DDX11Q96FC9 970 aa11.86□□□□□ -0.51
PRAMEF1-201ENST00000332296 PGBD1Q96JS3 809 aa11.86□□□□□ -0.51
PRAMEF1-201ENST00000332296 NEK1Q96PY6 1258 aa11.86□□□□□ -0.51
PRAMEF1-201ENST00000332296 NUP188Q5SRE5 1749 aa11.86□□□□□ -0.51
PRAMEF1-201ENST00000332296 COL5A3P25940 1745 aaPredicted RBP11.86□□□□□ -0.51
PRAMEF1-201ENST00000332296 CASP7P55210 303 aa11.86□□□□□ -0.51
PRAMEF1-201ENST00000332296 TNMDQ9H2S6 317 aa11.86□□□□□ -0.51
PRAMEF1-201ENST00000332296 CCNL1Q9UK58 526 aaPredicted RBP11.86□□□□□ -0.51
PRAMEF1-201ENST00000332296 ZNF831Q5JPB2 1677 aa11.86□□□□□ -0.51
PRAMEF1-201ENST00000332296 A0A087WZG4 1122 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 NR1I2O75469 434 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 HSP90B1P14625 803 aaKnown RBP11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 SCRN1Q12765 414 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 ANO6Q4KMQ2 910 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 HAUS7Q99871 368 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 SCAND2PQ9GZW5 306 aaPredicted RBP11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 CBX8Q9HC52 389 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 ZBTB1Q9Y2K1 713 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 TAF1LQ8IZX4 1826 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 A0A0G2JLW4 131 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 CRKLP46109 303 aaKnown RBP11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 FOSBP53539 338 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 KRT32Q14532 448 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 RBM43Q6ZSC3 357 aaKnown RBP11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 LINC00116Q8NCU8 138 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 KIAA1524Q8TCG1 905 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 CLSTN2Q9H4D0 955 aa11.85□□□□□ -0.51
PRAMEF1-201ENST00000332296 FAM177BA6PVY3 158 aa11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 MCMDC2Q4G0Z9 681 aa11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 LMBR1LQ6UX01 489 aa11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 GOLGA6L4A6NEF3 574 aa11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 APBA3O96018 575 aa11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 CDK11BP21127 795 aaKnown RBP11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 PTGS1P23219 599 aa11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 INTS5Q6P9B9 1019 aaKnown RBP11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 TTLL7Q6ZT98 887 aa11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 BICD2Q8TD16 824 aa11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 FTOQ9C0B1 505 aaKnown RBP eCLIP11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 DDX19AQ9NUU7 478 aaKnown RBP11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 CCDC87Q9NVE4 849 aa11.84□□□□□ -0.51
PRAMEF1-201ENST00000332296 FOXO4P98177 505 aa11.83□□□□□ -0.52
PRAMEF1-201ENST00000332296 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
PRAMEF1-201ENST00000332296 KBTBD3Q8NAB2 608 aa11.83□□□□□ -0.52
PRAMEF1-201ENST00000332296 PRIMPOLQ96LW4 560 aa11.83□□□□□ -0.52
PRAMEF1-201ENST00000332296 MAP7D2Q96T17 732 aa11.83□□□□□ -0.52
PRAMEF1-201ENST00000332296 SH3TC1Q8TE82 1336 aa11.83□□□□□ -0.52
PRAMEF1-201ENST00000332296 TNS1Q9HBL0 1735 aaKnown RBP11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 CTDNEP1O95476 244 aa11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 ATG9AQ7Z3C6 839 aa11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 DNAJC25Q9H1X3 360 aa11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 LRRC4BQ9NT99 713 aa11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 GOLIM4O00461 696 aa11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 PPFIA3O75145 1194 aa11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 HMGN5P82970 282 aaKnown RBP11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 CEBPZQ03701 1054 aaKnown RBP11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 APOBRQ0VD83 1088 aa11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 NSUN7Q8NE18 718 aaKnown RBP11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 PLBD2Q8NHP8 589 aa11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 SMARCC2Q8TAQ2 1214 aa11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 RREB1Q92766 1687 aa11.82□□□□□ -0.52
PRAMEF1-201ENST00000332296 H3BQV1 296 aa11.81□□□□□ -0.52
PRAMEF1-201ENST00000332296 GTF2F1P35269 517 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRAMEF1-201ENST00000332296 ADD1P35611 737 aaKnown RBP11.81□□□□□ -0.52
PRAMEF1-201ENST00000332296 LRMPQ12912 555 aa11.81□□□□□ -0.52
PRAMEF1-201ENST00000332296 IFFO2Q5TF58 517 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms