RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 TUBE1Q9UJT0 475 aa13.05□□□□□ -0.32
GINS3-202ENST00000328514 DBNLQ9UJU6 430 aaKnown RBP13.05□□□□□ -0.32
GINS3-202ENST00000328514 A0A1B0GVL5 298 aa13.04□□□□□ -0.32
GINS3-202ENST00000328514 ARHGAP6O43182 974 aa13.04□□□□□ -0.32
GINS3-202ENST00000328514 CMA1P23946 247 aa13.04□□□□□ -0.32
GINS3-202ENST00000328514 PDE4CQ08493 712 aa13.04□□□□□ -0.32
GINS3-202ENST00000328514 JAKMIP3Q5VZ66 844 aa13.04□□□□□ -0.32
GINS3-202ENST00000328514 BRAPQ7Z569 592 aa13.04□□□□□ -0.32
GINS3-202ENST00000328514 IQUBQ8NA54 791 aa13.04□□□□□ -0.32
GINS3-202ENST00000328514 EXOC4Q96A65 974 aa13.04□□□□□ -0.32
GINS3-202ENST00000328514 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
GINS3-202ENST00000328514 PALLDQ8WX93 1383 aa13.04□□□□□ -0.32
GINS3-202ENST00000328514 SRCAPQ6ZRS2 3230 aa13.04□□□□□ -0.32
GINS3-202ENST00000328514 SASH3O75995 380 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 PDIA3P30101 505 aaKnown RBP13.03□□□□□ -0.32
GINS3-202ENST00000328514 TNNI3KQ59H18 835 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 VSTM4Q8IW00 320 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 IP6K1Q92551 441 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 RABGGTAQ92696 567 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 ERCC4Q92889 916 aaPredicted RBP13.03□□□□□ -0.32
GINS3-202ENST00000328514 DDX21Q9NR30 783 aaKnown RBP eCLIP13.03□□□□□ -0.32
GINS3-202ENST00000328514 HELLSQ9NRZ9 838 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 FPGT-TNNI3KV9GXZ4 949 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 PHRF1Q9P1Y6 1649 aaKnown RBP13.03□□□□□ -0.32
GINS3-202ENST00000328514 ZNF142P52746 1687 aaPredicted RBP13.03□□□□□ -0.32
GINS3-202ENST00000328514 FAM237AA0A1B0GTK4 181 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 ZNF202O95125 648 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 IGKV5-2P06315 115 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 FDPSP14324 419 aaKnown RBP13.03□□□□□ -0.32
GINS3-202ENST00000328514 APOBRQ0VD83 1088 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 SMC1AQ14683 1233 aaKnown RBP13.03□□□□□ -0.32
GINS3-202ENST00000328514 AXDND1Q5T1B0 1012 aaPredicted RBP13.03□□□□□ -0.32
GINS3-202ENST00000328514 TMEM139Q8IV31 216 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 SMARCE1Q969G3 411 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 EDC3Q96F86 508 aaKnown RBP13.03□□□□□ -0.32
GINS3-202ENST00000328514 CARD6Q9BX69 1037 aa13.03□□□□□ -0.32
GINS3-202ENST00000328514 VWA3AA6NCI4 1184 aa13.02□□□□□ -0.32
GINS3-202ENST00000328514 SPTLC2O15270 562 aa13.02□□□□□ -0.32
GINS3-202ENST00000328514 URI1O94763 535 aaPredicted RBP13.02□□□□□ -0.32
GINS3-202ENST00000328514 OAS2P29728 719 aaKnown RBP13.02□□□□□ -0.32
GINS3-202ENST00000328514 RFX5P48382 616 aaPredicted RBP13.02□□□□□ -0.32
GINS3-202ENST00000328514 STK38Q15208 465 aa13.02□□□□□ -0.32
GINS3-202ENST00000328514 KBTBD3Q8NAB2 608 aa13.02□□□□□ -0.32
GINS3-202ENST00000328514 NFATC2IPQ8NCF5 419 aa13.02□□□□□ -0.32
GINS3-202ENST00000328514 FUT8Q9BYC5 575 aa13.02□□□□□ -0.32
GINS3-202ENST00000328514 LRRC2Q9BYS8 371 aa13.02□□□□□ -0.32
GINS3-202ENST00000328514 ARFGAP3Q9NP61 516 aa13.02□□□□□ -0.32
GINS3-202ENST00000328514 MRFAP1Q9Y605 127 aa13.02□□□□□ -0.32
GINS3-202ENST00000328514 VGLL3A8MV65 326 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 ST5P78524 1137 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 AMOTQ4VCS5 1084 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 NBPF6Q5VWK0 638 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 GOLGA5Q8TBA6 731 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 UPF1Q92900 1129 aaKnown RBP eCLIP13.01□□□□□ -0.33
GINS3-202ENST00000328514 SYTL4Q96C24 671 aaPredicted RBP13.01□□□□□ -0.33
GINS3-202ENST00000328514 NBPF4Q96M43 638 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 SIL1Q9H173 461 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 EFCC1Q9HA90 598 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 CWC15Q9P013 229 aaKnown RBP13.01□□□□□ -0.33
GINS3-202ENST00000328514 NFAT5O94916 1531 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 LTN1O94822 1766 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 CCDC151A5D8V7 595 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 MAP2K7O14733 419 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 POLR3GO15318 223 aaPredicted RBP13.01□□□□□ -0.33
GINS3-202ENST00000328514 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
GINS3-202ENST00000328514 LTKP29376 864 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 UBASH3AP57075 661 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 MYL5Q02045 173 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 TBX2Q13207 712 aaPredicted RBP13.01□□□□□ -0.33
GINS3-202ENST00000328514 PDIA6Q15084 440 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 SF3A1Q15459 793 aaKnown RBP13.01□□□□□ -0.33
GINS3-202ENST00000328514 ZSCAN26Q16670 478 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 RABL6Q3YEC7 729 aaPredicted RBP13.01□□□□□ -0.33
GINS3-202ENST00000328514 MYSM1Q5VVJ2 828 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 FBXO18Q8NFZ0 1043 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 HNRNPLLQ8WVV9 542 aaKnown RBP13.01□□□□□ -0.33
GINS3-202ENST00000328514 AK7Q96M32 723 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 SEC62Q99442 399 aaKnown RBP13.01□□□□□ -0.33
GINS3-202ENST00000328514 PPP2R2CQ9Y2T4 447 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
GINS3-202ENST00000328514 SIPA1L3O60292 1781 aaPredicted RBP13.01□□□□□ -0.33
GINS3-202ENST00000328514 ADAMTS7Q9UKP4 1686 aa13□□□□□ -0.33
GINS3-202ENST00000328514 NEURL1BA8MQ27 555 aa13□□□□□ -0.33
GINS3-202ENST00000328514 E7EWF7 191 aa13□□□□□ -0.33
GINS3-202ENST00000328514 STX10O60499 249 aa13□□□□□ -0.33
GINS3-202ENST00000328514 SEC31AO94979 1220 aaKnown RBP13□□□□□ -0.33
GINS3-202ENST00000328514 ATP1A3P13637 1013 aa13□□□□□ -0.33
GINS3-202ENST00000328514 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
GINS3-202ENST00000328514 PTPN12Q05209 780 aaKnown RBP13□□□□□ -0.33
GINS3-202ENST00000328514 GCKRQ14397 625 aa13□□□□□ -0.33
GINS3-202ENST00000328514 BRD3Q15059 726 aa13□□□□□ -0.33
GINS3-202ENST00000328514 PLEKHO1Q53GL0 409 aaPredicted RBP13□□□□□ -0.33
GINS3-202ENST00000328514 KRBA2Q6ZNG9 492 aa13□□□□□ -0.33
GINS3-202ENST00000328514 ELOA2Q8IYF1 753 aaPredicted RBP13□□□□□ -0.33
GINS3-202ENST00000328514 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
GINS3-202ENST00000328514 UTP14AQ9BVJ6 771 aaKnown RBP13□□□□□ -0.33
GINS3-202ENST00000328514 HPSEQ9Y251 543 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms