RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 ZSCAN23Q3MJ62 389 aa15.07■□□□□ 0
TRAK1-201ENST00000327628 CHPF2Q9P2E5 772 aa15.07■□□□□ 0
TRAK1-201ENST00000327628 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.06■□□□□ 0
TRAK1-201ENST00000327628 CCDC117Q8IWD4 279 aaPredicted RBP15.06■□□□□ 0
TRAK1-201ENST00000327628 CCDC65Q8IXS2 484 aa15.06■□□□□ 0
TRAK1-201ENST00000327628 GOLGA1Q92805 767 aa15.06■□□□□ 0
TRAK1-201ENST00000327628 EXOC7Q9UPT5 735 aa15.06■□□□□ 0
TRAK1-201ENST00000327628 KIF24Q5T7B8 1368 aa15.06■□□□□ 0
TRAK1-201ENST00000327628 SLU7O95391 586 aaKnown RBP15.06■□□□□ 0
TRAK1-201ENST00000327628 KIFAP3Q92845 792 aa15.06■□□□□ 0
TRAK1-201ENST00000327628 TRAPPC8Q9Y2L5 1435 aa15.06■□□□□ 0
TRAK1-201ENST00000327628 SUPT20HQ8NEM7 779 aa15.06■□□□□ 0
TRAK1-201ENST00000327628 VAT1LQ9HCJ6 419 aa15.06■□□□□ 0
TRAK1-201ENST00000327628 GAS8O95995 478 aa15.06■□□□□ 0
TRAK1-201ENST00000327628 FBXO31Q5XUX0 539 aaPredicted RBP15.06■□□□□ 0
TRAK1-201ENST00000327628 DHX32Q7L7V1 743 aaKnown RBP15.06■□□□□ 0
TRAK1-201ENST00000327628 ZC3H12CQ9C0D7 883 aaKnown RBP15.06■□□□□ 0
TRAK1-201ENST00000327628 C19orf44Q9H6X5 657 aa15.06■□□□□ 0
TRAK1-201ENST00000327628 SLC9C2Q5TAH2 1124 aa15.05■□□□□ 0
TRAK1-201ENST00000327628 KRT222Q8N1A0 295 aa15.05■□□□□ 0
TRAK1-201ENST00000327628 DCTPP1Q9H773 170 aa15.05■□□□□ 0
TRAK1-201ENST00000327628 EIF4G3O43432 1585 aaKnown RBP15.05■□□□□ 0
TRAK1-201ENST00000327628 ATP5J2-PTCD1G3V325 749 aa15.05■□□□□ -0
TRAK1-201ENST00000327628 PDE6BP35913 854 aa15.05■□□□□ -0
TRAK1-201ENST00000327628 COPS6Q7L5N1 327 aa15.05■□□□□ -0
TRAK1-201ENST00000327628 JDP2Q8WYK2 163 aa15.05■□□□□ -0
TRAK1-201ENST00000327628 YTHDC2Q9H6S0 1430 aaKnown RBP15.05■□□□□ -0
TRAK1-201ENST00000327628 HAUS3Q68CZ6 603 aa15.05■□□□□ -0
TRAK1-201ENST00000327628 Q6ZUG5 572 aa15.05■□□□□ -0
TRAK1-201ENST00000327628 DZIP3Q86Y13 1208 aaKnown RBP15.05■□□□□ -0
TRAK1-201ENST00000327628 SMC6Q96SB8 1091 aa15.05■□□□□ -0
TRAK1-201ENST00000327628 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.05■□□□□ -0
TRAK1-201ENST00000327628 BRDTQ58F21 947 aaPredicted RBP15.05■□□□□ -0
TRAK1-201ENST00000327628 CCDC110Q8TBZ0 833 aa15.05■□□□□ -0
TRAK1-201ENST00000327628 TMOD4Q9NZQ9 345 aa15.05■□□□□ -0
TRAK1-201ENST00000327628 NIP7Q9Y221 180 aaKnown RBP eCLIP15.05■□□□□ -0
TRAK1-201ENST00000327628 ASXL2Q76L83 1435 aa15.05■□□□□ -0
TRAK1-201ENST00000327628 RILPL1Q5EBL4 403 aa15.04■□□□□ -0
TRAK1-201ENST00000327628 C16orf45Q96MC5 204 aaPredicted RBP15.04■□□□□ -0
TRAK1-201ENST00000327628 LDHBP07195 334 aaKnown RBP15.04■□□□□ -0
TRAK1-201ENST00000327628 LIG1P18858 919 aa15.04■□□□□ -0
TRAK1-201ENST00000327628 LMBR1LQ6UX01 489 aa15.04■□□□□ -0
TRAK1-201ENST00000327628 ELP1O95163 1332 aa15.04■□□□□ -0
TRAK1-201ENST00000327628 DTHD1Q6ZMT9 781 aa15.04■□□□□ -0
TRAK1-201ENST00000327628 ANAPC4Q9UJX5 808 aa15.04■□□□□ -0
TRAK1-201ENST00000327628 CCDC42Q96M95 316 aa15.04■□□□□ -0
TRAK1-201ENST00000327628 TFIP11Q9UBB9 837 aaKnown RBP15.04■□□□□ -0
TRAK1-201ENST00000327628 FBF1Q8TES7 1133 aa15.03■□□□□ -0
TRAK1-201ENST00000327628 LRRC59Q96AG4 307 aaKnown RBP15.03■□□□□ -0
TRAK1-201ENST00000327628 CCDC184Q52MB2 194 aa15.03■□□□□ -0
TRAK1-201ENST00000327628 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
TRAK1-201ENST00000327628 SLC8A3P57103 927 aa15.03■□□□□ -0
TRAK1-201ENST00000327628 HAND2P61296 217 aa15.03■□□□□ -0
TRAK1-201ENST00000327628 PAXIP1Q6ZW49 1069 aaPredicted RBP15.03■□□□□ -0
TRAK1-201ENST00000327628 SNRKQ9NRH2 765 aa15.03■□□□□ -0
TRAK1-201ENST00000327628 BIN1O00499 593 aa15.03■□□□□ -0
TRAK1-201ENST00000327628 CDAN1Q8IWY9 1227 aa15.03■□□□□ -0
TRAK1-201ENST00000327628 SMC5Q8IY18 1101 aa15.02■□□□□ -0
TRAK1-201ENST00000327628 PARP1P09874 1014 aaKnown RBP15.02■□□□□ -0
TRAK1-201ENST00000327628 NUP58Q9BVL2 599 aa15.02■□□□□ -0
TRAK1-201ENST00000327628 SKILP12757 684 aa15.02□□□□□ -0.01
TRAK1-201ENST00000327628 CNGA1P29973 690 aa15.02□□□□□ -0.01
TRAK1-201ENST00000327628 STX10O60499 249 aa15.02□□□□□ -0.01
TRAK1-201ENST00000327628 LMOD1P29536 600 aaPredicted RBP15.02□□□□□ -0.01
TRAK1-201ENST00000327628 MRVI1Q9Y6F6 885 aa15.02□□□□□ -0.01
TRAK1-201ENST00000327628 VAV2P52735 878 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 GPR161Q8N6U8 529 aaKnown RBP15.01□□□□□ -0.01
TRAK1-201ENST00000327628 EPB41P11171 864 aaKnown RBP15.01□□□□□ -0.01
TRAK1-201ENST00000327628 ANO6Q4KMQ2 910 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 SEL1L2Q5TEA6 688 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 CNNM4Q6P4Q7 775 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 IP6K1Q92551 441 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 ARHGEF10LQ9HCE6 1279 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 TRMT1Q9NXH9 659 aaKnown RBP15.01□□□□□ -0.01
TRAK1-201ENST00000327628 FRMD4BQ9Y2L6 1034 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 TBX22Q9Y458 520 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 DEXIO95424 95 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 PPM1FP49593 454 aaPredicted RBP15.01□□□□□ -0.01
TRAK1-201ENST00000327628 EIF4A2Q14240 407 aaKnown RBP15.01□□□□□ -0.01
TRAK1-201ENST00000327628 C20orf194Q5TEA3 1177 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 RUFY3Q7L099 469 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 SV2BQ7L1I2 683 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 CCDC26Q8TAB7 109 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 IRS4O14654 1257 aaPredicted RBP15.01□□□□□ -0.01
TRAK1-201ENST00000327628 SMTNP53814 917 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 MRPS9P82933 396 aaKnown RBP15.01□□□□□ -0.01
TRAK1-201ENST00000327628 NMIQ13287 307 aaPredicted RBP15.01□□□□□ -0.01
TRAK1-201ENST00000327628 EDC4Q6P2E9 1401 aaKnown RBP15.01□□□□□ -0.01
TRAK1-201ENST00000327628 SBNO1A3KN83 1393 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 ERICH4A6NGS2 130 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 CALUO43852 315 aaPredicted RBP15.01□□□□□ -0.01
TRAK1-201ENST00000327628 ERCC6LQ2NKX8 1250 aa15.01□□□□□ -0.01
TRAK1-201ENST00000327628 DDX21Q9NR30 783 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRAK1-201ENST00000327628 WDR44Q5JSH3 913 aa15□□□□□ -0.01
TRAK1-201ENST00000327628 DDX23Q9BUQ8 820 aaKnown RBP15□□□□□ -0.01
TRAK1-201ENST00000327628 TXNDC16Q9P2K2 825 aa15□□□□□ -0.01
TRAK1-201ENST00000327628 SYCP2Q9BX26 1530 aa15□□□□□ -0.01
TRAK1-201ENST00000327628 CHMP4BP1P59074 171 aa15□□□□□ -0.01
TRAK1-201ENST00000327628 CCDC144CPQ8IYA2 1237 aa15□□□□□ -0.01
TRAK1-201ENST00000327628 PLBD2Q8NHP8 589 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms