RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TSPOAP1O95153 1857 aa14.77□□□□□ -0.04
CCDC60-201ENST00000327554 CCDC151A5D8V7 595 aa14.77□□□□□ -0.05
CCDC60-201ENST00000327554 NPM1P06748 294 aaKnown RBP eCLIP14.77□□□□□ -0.05
CCDC60-201ENST00000327554 UBASH3AP57075 661 aa14.77□□□□□ -0.05
CCDC60-201ENST00000327554 GNG11P61952 73 aa14.77□□□□□ -0.05
CCDC60-201ENST00000327554 ICE2Q659A1 982 aa14.77□□□□□ -0.05
CCDC60-201ENST00000327554 CCDC129Q6ZRS4 1044 aa14.77□□□□□ -0.05
CCDC60-201ENST00000327554 NCOA5Q9HCD5 579 aaKnown RBP14.77□□□□□ -0.05
CCDC60-201ENST00000327554 PTPRUQ92729 1446 aa14.77□□□□□ -0.05
CCDC60-201ENST00000327554 ARHGAP6O43182 974 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 PPFIA3O75145 1194 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 CHGBP05060 677 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 CCT2P78371 535 aaKnown RBP14.76□□□□□ -0.05
CCDC60-201ENST00000327554 RGS22Q8NE09 1264 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 MAP3K2Q9Y2U5 619 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 CLIC4Q9Y696 253 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 PIK3C2AO00443 1686 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 CARMIL3Q8ND23 1372 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 TMEM232C9JQI7 657 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 ZNF202O95125 648 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 TXLNAP40222 546 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 CWF19L2Q2TBE0 894 aaKnown RBP14.76□□□□□ -0.05
CCDC60-201ENST00000327554 JAKMIP3Q5VZ66 844 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 GOLGA1Q92805 767 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 SUCLG2Q96I99 432 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 AGXT2Q9BYV1 514 aa14.76□□□□□ -0.05
CCDC60-201ENST00000327554 CBFA2T2O43439 604 aa14.75□□□□□ -0.05
CCDC60-201ENST00000327554 BRD3Q15059 726 aa14.75□□□□□ -0.05
CCDC60-201ENST00000327554 DHX32Q7L7V1 743 aaKnown RBP14.75□□□□□ -0.05
CCDC60-201ENST00000327554 DHX58Q96C10 678 aa14.75□□□□□ -0.05
CCDC60-201ENST00000327554 KCNQ3O43525 872 aa14.75□□□□□ -0.05
CCDC60-201ENST00000327554 RPS6KA5O75582 802 aa14.75□□□□□ -0.05
CCDC60-201ENST00000327554 IVLP07476 585 aa14.75□□□□□ -0.05
CCDC60-201ENST00000327554 STK38Q15208 465 aa14.75□□□□□ -0.05
CCDC60-201ENST00000327554 PTPN21Q16825 1174 aa14.75□□□□□ -0.05
CCDC60-201ENST00000327554 BICC1Q9H694 974 aaKnown RBP14.75□□□□□ -0.05
CCDC60-201ENST00000327554 GOLGA6L9A6NEM1 432 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 FDPSP14324 419 aaKnown RBP14.74□□□□□ -0.05
CCDC60-201ENST00000327554 GTF2A1P52655 376 aaPredicted RBP14.74□□□□□ -0.05
CCDC60-201ENST00000327554 CFAP100Q494V2 611 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 ISM2Q6H9L7 571 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 FOXR1Q6PIV2 292 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 LEKR1Q6ZMV7 388 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 KCNG4Q8TDN1 519 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 PDE11AQ9HCR9 933 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 GEMIN8Q9NWZ8 242 aaKnown RBP14.74□□□□□ -0.05
CCDC60-201ENST00000327554 YEATS4O95619 227 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 SERPINC1P01008 464 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 TOP1P11387 765 aaKnown RBP14.74□□□□□ -0.05
CCDC60-201ENST00000327554 EXOSC10Q01780 885 aaKnown RBP14.74□□□□□ -0.05
CCDC60-201ENST00000327554 SF3A1Q15459 793 aaKnown RBP14.74□□□□□ -0.05
CCDC60-201ENST00000327554 NBPF6Q5VWK0 638 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 PACS2Q86VP3 889 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 NBPF4Q96M43 638 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 INTS13Q9NVM9 706 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 POLR3EQ9NVU0 708 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 VPS18Q9P253 973 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 RFX7Q2KHR2 1363 aa14.74□□□□□ -0.05
CCDC60-201ENST00000327554 MARF1Q9Y4F3 1742 aaKnown RBP14.74□□□□□ -0.05
CCDC60-201ENST00000327554 A0A1B0GUL7 405 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 SPTLC2O15270 562 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 HMGB1P09429 215 aaKnown RBP14.73□□□□□ -0.05
CCDC60-201ENST00000327554 MAGEA9P43362 315 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 MYL5Q02045 173 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 TBX2Q13207 712 aaPredicted RBP14.73□□□□□ -0.05
CCDC60-201ENST00000327554 BEND6Q5SZJ8 279 aaPredicted RBP14.73□□□□□ -0.05
CCDC60-201ENST00000327554 TOGARAM2Q6ZUX3 1019 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 HNRNPLLQ8WVV9 542 aaKnown RBP14.73□□□□□ -0.05
CCDC60-201ENST00000327554 TUBE1Q9UJT0 475 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 HDAC5Q9UQL6 1122 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 SLIT1O75093 1534 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 PFKFB1P16118 471 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 AXDND1Q5T1B0 1012 aaPredicted RBP14.73□□□□□ -0.05
CCDC60-201ENST00000327554 GOLGA6L1Q8N7Z2 621 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 MROH7-TTC4A0A0A0MT08 1334 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 UTYO14607 1347 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 DIP2AQ14689 1571 aa14.73□□□□□ -0.05
CCDC60-201ENST00000327554 PDIA3P30101 505 aaKnown RBP14.72□□□□□ -0.05
CCDC60-201ENST00000327554 HOXC9P31274 260 aa14.72□□□□□ -0.05
CCDC60-201ENST00000327554 KSR2Q6VAB6 950 aa14.72□□□□□ -0.05
CCDC60-201ENST00000327554 MSL3Q8N5Y2 521 aaKnown RBP14.72□□□□□ -0.05
CCDC60-201ENST00000327554 KLHDC4Q8TBB5 520 aa14.72□□□□□ -0.05
CCDC60-201ENST00000327554 BAG1Q99933 345 aaPredicted RBP14.72□□□□□ -0.05
CCDC60-201ENST00000327554 ANKZF1Q9H8Y5 726 aa14.72□□□□□ -0.05
CCDC60-201ENST00000327554 NDUFB9Q9Y6M9 179 aa14.72□□□□□ -0.05
CCDC60-201ENST00000327554 GRM8O00222 908 aa14.72□□□□□ -0.05
CCDC60-201ENST00000327554 ATP5JP18859 108 aa14.72□□□□□ -0.05
CCDC60-201ENST00000327554 USP5P45974 858 aa14.72□□□□□ -0.05
CCDC60-201ENST00000327554 PROSER3Q2NL68 480 aa14.72□□□□□ -0.05
CCDC60-201ENST00000327554 MCMDC2Q4G0Z9 681 aa14.72□□□□□ -0.05
CCDC60-201ENST00000327554 NOM1Q5C9Z4 860 aaKnown RBP14.72□□□□□ -0.05
CCDC60-201ENST00000327554 OTUD7BQ6GQQ9 843 aa14.72□□□□□ -0.05
CCDC60-201ENST00000327554 LGR6Q9HBX8 967 aa14.72□□□□□ -0.05
CCDC60-201ENST00000327554 STX10O60499 249 aa14.71□□□□□ -0.05
CCDC60-201ENST00000327554 N4BP1O75113 896 aaKnown RBP14.71□□□□□ -0.05
CCDC60-201ENST00000327554 CMA1P23946 247 aa14.71□□□□□ -0.05
CCDC60-201ENST00000327554 TTC31Q49AM3 519 aaPredicted RBP14.71□□□□□ -0.05
CCDC60-201ENST00000327554 BRMS1Q9HCU9 246 aa14.71□□□□□ -0.05
CCDC60-201ENST00000327554 DBF4Q9UBU7 674 aaPredicted RBP14.71□□□□□ -0.05
CCDC60-201ENST00000327554 RAB21Q9UL25 225 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms