RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 NCOA1Q15788 1441 aa19■□□□□ 0.63
SMCHD1-201ENST00000320876 CTTNBP2Q8WZ74 1663 aa19■□□□□ 0.63
SMCHD1-201ENST00000320876 INF2Q27J81 1249 aa19■□□□□ 0.63
SMCHD1-201ENST00000320876 ATL3Q6DD88 541 aa19■□□□□ 0.63
SMCHD1-201ENST00000320876 VPS52Q8N1B4 723 aa19■□□□□ 0.63
SMCHD1-201ENST00000320876 VAT1LQ9HCJ6 419 aa19■□□□□ 0.63
SMCHD1-201ENST00000320876 MARCKSP29966 332 aaPredicted RBP19■□□□□ 0.63
SMCHD1-201ENST00000320876 GABPB1Q06547 395 aaPredicted RBP19■□□□□ 0.63
SMCHD1-201ENST00000320876 BRAPQ7Z569 592 aa19■□□□□ 0.63
SMCHD1-201ENST00000320876 CCDC61Q9Y6R9 512 aa19■□□□□ 0.63
SMCHD1-201ENST00000320876 CALML3P27482 149 aa19■□□□□ 0.63
SMCHD1-201ENST00000320876 AKR1B15C9JRZ8 316 aaPredicted RBP19■□□□□ 0.63
SMCHD1-201ENST00000320876 SYT10Q6XYQ8 523 aa19■□□□□ 0.63
SMCHD1-201ENST00000320876 GNAQP50148 359 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 CCDC122Q5T0U0 273 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 SDSP20132 328 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 GKAP1Q5VSY0 366 aaPredicted RBP18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 IFT20Q8IY31 132 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 MCUR1Q96AQ8 359 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 NESP48681 1621 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 CLUL1Q15846 466 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 IFNKQ9P0W0 207 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 EVCP57679 992 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 PPP1R42Q7Z4L9 355 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 HEATR3Q7Z4Q2 680 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 RABGAP1Q9Y3P9 1069 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 LDHCP07864 332 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 Q6ZUG5 572 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 AFAP1Q8N556 730 aa18.99■□□□□ 0.63
SMCHD1-201ENST00000320876 KRT2P35908 639 aa18.98■□□□□ 0.63
SMCHD1-201ENST00000320876 NUTM2AQ8IVF1 878 aaPredicted RBP18.98■□□□□ 0.63
SMCHD1-201ENST00000320876 PPP1R9BQ96SB3 815 aa18.98■□□□□ 0.63
SMCHD1-201ENST00000320876 ARID4AP29374 1257 aaPredicted RBP18.98■□□□□ 0.63
SMCHD1-201ENST00000320876 KARSQ15046 597 aaKnown RBP18.98■□□□□ 0.63
SMCHD1-201ENST00000320876 AFAP1L2Q8N4X5 818 aa18.98■□□□□ 0.63
SMCHD1-201ENST00000320876 ZGPATQ8N5A5 531 aaKnown RBP18.98■□□□□ 0.63
SMCHD1-201ENST00000320876 NUDT16Q96DE0 195 aaKnown RBP18.98■□□□□ 0.63
SMCHD1-201ENST00000320876 GJC1P36383 396 aa18.98■□□□□ 0.63
SMCHD1-201ENST00000320876 CROCCP2Q86T23 111 aa18.98■□□□□ 0.63
SMCHD1-201ENST00000320876 FAM169AQ9Y6X4 670 aa18.98■□□□□ 0.63
SMCHD1-201ENST00000320876 TRIM75PA6NK02 468 aa18.97■□□□□ 0.63
SMCHD1-201ENST00000320876 CRCPO75575 148 aa18.97■□□□□ 0.63
SMCHD1-201ENST00000320876 PLCB1Q9NQ66 1216 aa18.97■□□□□ 0.63
SMCHD1-201ENST00000320876 PTCD1O75127 700 aaKnown RBP18.97■□□□□ 0.63
SMCHD1-201ENST00000320876 FAM13AO94988 1023 aa18.97■□□□□ 0.63
SMCHD1-201ENST00000320876 NAPGQ99747 312 aaPredicted RBP18.97■□□□□ 0.63
SMCHD1-201ENST00000320876 STX8Q9UNK0 236 aa18.97■□□□□ 0.63
SMCHD1-201ENST00000320876 MCMDC2Q4G0Z9 681 aa18.97■□□□□ 0.63
SMCHD1-201ENST00000320876 UBL4BQ8N7F7 174 aa18.97■□□□□ 0.63
SMCHD1-201ENST00000320876 NPHP3Q7Z494 1330 aa18.97■□□□□ 0.63
SMCHD1-201ENST00000320876 WDR78Q5VTH9 848 aa18.97■□□□□ 0.63
SMCHD1-201ENST00000320876 FAM114A2Q9NRY5 505 aa18.97■□□□□ 0.63
SMCHD1-201ENST00000320876 MAP3K1Q13233 1512 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 C8orf74Q6P047 294 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 TBC1D31Q96DN5 1066 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 ESYT1Q9BSJ8 1104 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 CABP5Q9NP86 173 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 ELP1O95163 1332 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 SKAP1Q86WV1 359 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 CCDC170Q8IYT3 715 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 NECAB1Q8N987 351 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 PPP1R12CQ9BZL4 782 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 BRF1Q92994 677 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 TSHZ3Q63HK5 1081 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 RNF168Q8IYW5 571 aaPredicted RBP18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 TTC16Q8NEE8 873 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 C6orf50Q9HD87 102 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 TLDC2A0PJX2 215 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 SH3BP5O60239 455 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 INTS4Q96HW7 963 aaKnown RBP18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 CYP26C1Q6V0L0 522 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 KIFAP3Q92845 792 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 FRMD4BQ9Y2L6 1034 aa18.96■□□□□ 0.63
SMCHD1-201ENST00000320876 HSPA1LP34931 641 aa18.96■□□□□ 0.62
SMCHD1-201ENST00000320876 SCAF11Q99590 1463 aaKnown RBP18.96■□□□□ 0.62
SMCHD1-201ENST00000320876 HMGB1P1B2RPK0 211 aaPredicted RBP18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 TTC36A6NLP5 189 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 CCT6BQ92526 530 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 TERF1P54274 439 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 TRPC3Q13507 836 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 CCDC38Q502W7 563 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 UBE3BQ7Z3V4 1068 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 RASSF2P50749 326 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 GEN1Q17RS7 908 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 DHX58Q96C10 678 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 TTF2Q9UNY4 1162 aaKnown RBP18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 UQCRFS1P1P0C7P4 283 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 VWA3BQ502W6 1294 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 POGZQ7Z3K3 1410 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 GOLGA6BA6NDN3 693 aa18.95■□□□□ 0.62
SMCHD1-201ENST00000320876 RUFY4Q6ZNE9 571 aa18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 ARHGEF2Q92974 986 aaKnown RBP18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 CALM1P0DP23 149 aa18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 CALM2P0DP24 149 aa18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 CALM3P0DP25 149 aa18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 RNF10Q8N5U6 811 aaKnown RBP18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 NAPAP54920 295 aa18.94■□□□□ 0.62
SMCHD1-201ENST00000320876 SDCCAG8Q86SQ7 713 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms