RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 PDE6AP16499 860 aa16.44■□□□□ 0.22
VAMP2-201ENST00000316509 HSPA1LP34931 641 aa16.44■□□□□ 0.22
VAMP2-201ENST00000316509 UBE4AQ14139 1066 aa16.44■□□□□ 0.22
VAMP2-201ENST00000316509 ANKRD18AQ8IVF6 992 aa16.44■□□□□ 0.22
VAMP2-201ENST00000316509 GNL3LQ9NVN8 582 aaKnown RBP16.44■□□□□ 0.22
VAMP2-201ENST00000316509 BSDC1Q9NW68 430 aaPredicted RBP16.44■□□□□ 0.22
VAMP2-201ENST00000316509 TCRBV5S4A2TA0A5A2 114 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 ZBTB22O15209 634 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 FOXP2O15409 715 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 GNAT2P19087 354 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 SCAND2PQ9GZW5 306 aaPredicted RBP16.43■□□□□ 0.22
VAMP2-201ENST00000316509 MYH7P12883 1935 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 ZNF532Q9HCE3 1301 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 DHX16O60231 1041 aaKnown RBP16.43■□□□□ 0.22
VAMP2-201ENST00000316509 ONECUT3O60422 494 aaPredicted RBP16.43■□□□□ 0.22
VAMP2-201ENST00000316509 IDH1O75874 414 aaKnown RBP16.43■□□□□ 0.22
VAMP2-201ENST00000316509 NASPP49321 788 aaPredicted RBP16.43■□□□□ 0.22
VAMP2-201ENST00000316509 CHRNDQ07001 517 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 SCRN1Q12765 414 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 TRDNQ13061 729 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 STK3Q13188 491 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 NAA16Q6N069 864 aaPredicted RBP16.43■□□□□ 0.22
VAMP2-201ENST00000316509 PI16Q6UXB8 463 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 HELBQ8NG08 1087 aaPredicted RBP16.43■□□□□ 0.22
VAMP2-201ENST00000316509 CHAMP1Q96JM3 812 aa16.43■□□□□ 0.22
VAMP2-201ENST00000316509 HMGB2P26583 209 aaKnown RBP16.42■□□□□ 0.22
VAMP2-201ENST00000316509 CCDC183Q5T5S1 534 aa16.42■□□□□ 0.22
VAMP2-201ENST00000316509 ATL3Q6DD88 541 aa16.42■□□□□ 0.22
VAMP2-201ENST00000316509 TTLL5Q6EMB2 1281 aa16.42■□□□□ 0.22
VAMP2-201ENST00000316509 RALYLQ86SE5 291 aaKnown RBP16.42■□□□□ 0.22
VAMP2-201ENST00000316509 MB21D2Q8IYB1 491 aaPredicted RBP16.42■□□□□ 0.22
VAMP2-201ENST00000316509 NSFL1CQ9UNZ2 370 aaKnown RBP16.42■□□□□ 0.22
VAMP2-201ENST00000316509 NHSQ6T4R5 1651 aa16.42■□□□□ 0.22
VAMP2-201ENST00000316509 PATL2C9JE40 543 aaKnown RBP16.41■□□□□ 0.22
VAMP2-201ENST00000316509 PDIA3P30101 505 aaKnown RBP16.41■□□□□ 0.22
VAMP2-201ENST00000316509 DNM1Q05193 864 aaKnown RBP16.41■□□□□ 0.22
VAMP2-201ENST00000316509 CCDC173Q0VFZ6 552 aa16.41■□□□□ 0.22
VAMP2-201ENST00000316509 ERFEQ4G0M1 354 aa16.41■□□□□ 0.22
VAMP2-201ENST00000316509 TMED8Q6PL24 325 aaPredicted RBP16.41■□□□□ 0.22
VAMP2-201ENST00000316509 FAM43AQ8N2R8 423 aa16.41■□□□□ 0.22
VAMP2-201ENST00000316509 STRBPQ96SI9 672 aaKnown RBP16.41■□□□□ 0.22
VAMP2-201ENST00000316509 SETDB2Q96T68 719 aa16.41■□□□□ 0.22
VAMP2-201ENST00000316509 RBM27Q9P2N5 1060 aaKnown RBP16.41■□□□□ 0.22
VAMP2-201ENST00000316509 GADD45BO75293 160 aaPredicted RBP16.41■□□□□ 0.22
VAMP2-201ENST00000316509 ZPR1O75312 459 aa16.41■□□□□ 0.22
VAMP2-201ENST00000316509 NSUN7Q8NE18 718 aaKnown RBP16.41■□□□□ 0.22
VAMP2-201ENST00000316509 AIDAQ96BJ3 306 aa16.41■□□□□ 0.22
VAMP2-201ENST00000316509 GJD4Q96KN9 370 aaPredicted RBP16.41■□□□□ 0.22
VAMP2-201ENST00000316509 RTCBQ9Y3I0 505 aaKnown RBP16.41■□□□□ 0.22
VAMP2-201ENST00000316509 H3BQV1 296 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 IGSF3O75054 1194 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 GTF2E1P29083 439 aaPredicted RBP16.4■□□□□ 0.22
VAMP2-201ENST00000316509 APOBRQ0VD83 1088 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 RASGRF1Q13972 1273 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 IFFO2Q5TF58 517 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 CDC37L1Q7L3B6 337 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 PPP1R9BQ96SB3 815 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 PANK2Q9BZ23 570 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 SCN7AQ01118 1682 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 SEMA3EO15041 775 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 TPTE2Q6XPS3 522 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 NLRP3Q96P20 1036 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 GDPD2Q9HCC8 539 aa16.4■□□□□ 0.22
VAMP2-201ENST00000316509 CCNL1Q9UK58 526 aaPredicted RBP16.4■□□□□ 0.22
VAMP2-201ENST00000316509 LAMA4Q16363 1823 aa16.39■□□□□ 0.21
VAMP2-201ENST00000316509 ZNF804BA4D1E1 1349 aa16.39■□□□□ 0.21
VAMP2-201ENST00000316509 PNPLA7Q6ZV29 1317 aa16.39■□□□□ 0.21
VAMP2-201ENST00000316509 PRC1O43663 620 aa16.39■□□□□ 0.21
VAMP2-201ENST00000316509 FOXD4L6Q3SYB3 417 aaPredicted RBP16.39■□□□□ 0.21
VAMP2-201ENST00000316509 FOXD4L3Q6VB84 417 aaPredicted RBP16.39■□□□□ 0.21
VAMP2-201ENST00000316509 CFAP45Q9UL16 551 aa16.39■□□□□ 0.21
VAMP2-201ENST00000316509 SYCE3A1L190 88 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 FIBPO43427 364 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 TBC1D9BQ66K14 1250 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 TMEM87BQ96K49 555 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 MTA3Q9BTC8 594 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 LRRC2Q9BYS8 371 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 ANKRD2Q9GZV1 360 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 TSPY26PQ9H489 355 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 WWC3Q9ULE0 1092 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 JAK2O60674 1132 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 CAVIN4Q5BKX8 364 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 NACAP1Q9BZK3 213 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 PDS5AQ29RF7 1337 aaKnown RBP16.38■□□□□ 0.21
VAMP2-201ENST00000316509 SALL1Q9NSC2 1324 aa16.38■□□□□ 0.21
VAMP2-201ENST00000316509 PTPDC1A2A3K4 754 aa16.37■□□□□ 0.21
VAMP2-201ENST00000316509 BCAMP50895 628 aa16.37■□□□□ 0.21
VAMP2-201ENST00000316509 RESTQ13127 1097 aa16.37■□□□□ 0.21
VAMP2-201ENST00000316509 MEX3CQ5U5Q3 659 aaKnown RBP16.37■□□□□ 0.21
VAMP2-201ENST00000316509 MAGEB6Q8N7X4 407 aa16.37■□□□□ 0.21
VAMP2-201ENST00000316509 CNNM2Q9H8M5 875 aa16.37■□□□□ 0.21
VAMP2-201ENST00000316509 DENND2AQ9ULE3 1009 aa16.37■□□□□ 0.21
VAMP2-201ENST00000316509 A0A0G2JLW4 131 aa16.37■□□□□ 0.21
VAMP2-201ENST00000316509 APPP05067 770 aa16.37■□□□□ 0.21
VAMP2-201ENST00000316509 UVSSAQ2YD98 709 aa16.37■□□□□ 0.21
VAMP2-201ENST00000316509 RBSNQ9H1K0 784 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms