RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 GOLM1Q8NBJ4 401 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 FBXO27Q8NI29 283 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 PCDHB5Q9Y5E4 795 aa6.07□□□□□ -1.44
SMCO3-201ENST00000316048 PPFIA3O75145 1194 aa6.06□□□□□ -1.44
SMCO3-201ENST00000316048 ZNF468Q5VIY5 522 aaPredicted RBP6.06□□□□□ -1.44
SMCO3-201ENST00000316048 STK35Q8TDR2 534 aa6.06□□□□□ -1.44
SMCO3-201ENST00000316048 ARMC5Q96C12 935 aa6.06□□□□□ -1.44
SMCO3-201ENST00000316048 KLF15Q9UIH9 416 aa6.06□□□□□ -1.44
SMCO3-201ENST00000316048 LCE2BO14633 110 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 GHRHP01286 108 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 PWP1Q13610 501 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 SNAP47Q5SQN1 464 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 BNC2Q6ZN30 1099 aaPredicted RBP6.05□□□□□ -1.44
SMCO3-201ENST00000316048 CCDC81Q6ZN84 652 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 FAM35AQ86V20 835 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 LACRTQ9GZZ8 138 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 ZSWIM4Q9H7M6 989 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 EFCC1Q9HA90 598 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 KCNQ5Q9NR82 932 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 TRIM33Q9UPN9 1127 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 TLR3O15455 904 aaKnown RBP6.05□□□□□ -1.44
SMCO3-201ENST00000316048 GREM1O60565 184 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 ETFBP38117 255 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 SEPT6Q14141 434 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 BMS1Q14692 1282 aaKnown RBP6.05□□□□□ -1.44
SMCO3-201ENST00000316048 PERM1Q5SV97 790 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 AGMOQ6ZNB7 445 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 PLD4Q96BZ4 506 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 SENP2Q9HC62 589 aa6.05□□□□□ -1.44
SMCO3-201ENST00000316048 SUPT16HQ9Y5B9 1047 aaKnown RBP6.05□□□□□ -1.44
SMCO3-201ENST00000316048 F13A1P00488 732 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 GAS6Q14393 721 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 ZNF423Q2M1K9 1284 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 KANK3Q6NY19 840 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 VN1R5Q7Z5H4 357 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 KIFC2Q96AC6 838 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 CEP44Q9C0F1 390 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 PPT2Q9UMR5 302 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 SLC6A14Q9UN76 642 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 PHF24Q9UPV7 400 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 SSBP05455 408 aaKnown RBP eCLIP6.04□□□□□ -1.44
SMCO3-201ENST00000316048 BMP4P12644 408 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 LMNB2Q03252 620 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 NEUROD1Q13562 356 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 MPRIPQ6WCQ1 1025 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 GMCL1Q96IK5 515 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 TRERF1Q96PN7 1200 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 NT5C1AQ9BXI3 368 aa6.04□□□□□ -1.44
SMCO3-201ENST00000316048 SH2B1Q9NRF2 756 aaPredicted RBP6.04□□□□□ -1.44
SMCO3-201ENST00000316048 APOBRQ0VD83 1088 aa6.03□□□□□ -1.44
SMCO3-201ENST00000316048 GRIN3AQ8TCU5 1115 aa6.03□□□□□ -1.44
SMCO3-201ENST00000316048 BSNDQ8WZ55 320 aa6.03□□□□□ -1.44
SMCO3-201ENST00000316048 SEC16BQ96JE7 1060 aa6.03□□□□□ -1.44
SMCO3-201ENST00000316048 LPIN3Q9BQK8 851 aa6.03□□□□□ -1.44
SMCO3-201ENST00000316048 HIRIP3Q9BW71 556 aaPredicted RBP6.03□□□□□ -1.44
SMCO3-201ENST00000316048 SMG9Q9H0W8 520 aaKnown RBP6.03□□□□□ -1.44
SMCO3-201ENST00000316048 OSBPL2Q9H1P3 480 aa6.03□□□□□ -1.44
SMCO3-201ENST00000316048 CLEC4MQ9H2X3 399 aaPredicted RBP6.03□□□□□ -1.44
SMCO3-201ENST00000316048 TMEM39AQ9NV64 488 aa6.03□□□□□ -1.44
SMCO3-201ENST00000316048 MYO15BQ96JP2 1530 aa6.02□□□□□ -1.44
SMCO3-201ENST00000316048 BMP6P22004 513 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 ADH7P40394 386 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 SOX9P48436 509 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 PCDH1Q08174 1060 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 HGSNATQ68CP4 663 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 FAM196AQ6ZSG2 479 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 JARID2Q92833 1246 aaPredicted RBP6.02□□□□□ -1.45
SMCO3-201ENST00000316048 SOX13Q9UN79 622 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 SMNDC1O75940 238 aaKnown RBP eCLIP6.02□□□□□ -1.45
SMCO3-201ENST00000316048 RLBP1P12271 317 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 CDC25BP30305 580 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 SEZ6Q53EL9 994 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 FCHSD1Q86WN1 690 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 TRIM42Q8IWZ5 723 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 HNRNPLLQ8WVV9 542 aaKnown RBP6.02□□□□□ -1.45
SMCO3-201ENST00000316048 ANAPC16Q96DE5 110 aa6.02□□□□□ -1.45
SMCO3-201ENST00000316048 CADPSQ9ULU8 1353 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 SIN3BO75182 1162 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 B3GALT4O96024 378 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 EPHA1P21709 976 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 PTPN11Q06124 597 aaPredicted RBP6.01□□□□□ -1.45
SMCO3-201ENST00000316048 RPS26P11Q5JNZ5 115 aaPredicted RBP6.01□□□□□ -1.45
SMCO3-201ENST00000316048 GDF6Q6KF10 455 aaPredicted RBP6.01□□□□□ -1.45
SMCO3-201ENST00000316048 ZNF662Q6ZS27 426 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 SV2AQ7L0J3 742 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 NLGN1Q8N2Q7 840 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 FAM169BQ8N8A8 192 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 TNFRSF25Q93038 417 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 GAL3ST3Q96A11 431 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 NEURL1BA8MQ27 555 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 C11orf95C9JLR9 678 aaPredicted RBP6.01□□□□□ -1.45
SMCO3-201ENST00000316048 MX2P20592 715 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 NFX1Q12986 1120 aaKnown RBP6.01□□□□□ -1.45
SMCO3-201ENST00000316048 FOXR1Q6PIV2 292 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 TXNDC11Q6PKC3 985 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 ANKS3Q6ZW76 656 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 JAZF1Q86VZ6 243 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 SULF2Q8IWU5 870 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 NKD1Q969G9 470 aa6.01□□□□□ -1.45
SMCO3-201ENST00000316048 MDFIQ99750 246 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms