RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 SLC39A6Q13433 755 aa23.68■■□□□ 1.38
KDM3B-201ENST00000314358 ZKSCAN3Q9BRR0 538 aa23.68■■□□□ 1.38
KDM3B-201ENST00000314358 IFNKQ9P0W0 207 aa23.68■■□□□ 1.38
KDM3B-201ENST00000314358 ATP6V0A2Q9Y487 856 aa23.68■■□□□ 1.38
KDM3B-201ENST00000314358 APOBRQ0VD83 1088 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 CCDC42Q96M95 316 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 IMPG2Q9BZV3 1241 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 CLEC11AQ9Y240 323 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 TBC1D32Q96NH3 1257 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 HMG20BQ9P0W2 317 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 SCAF11Q99590 1463 aaKnown RBP23.67■■□□□ 1.38
KDM3B-201ENST00000314358 DHX29Q7Z478 1369 aaKnown RBP23.67■■□□□ 1.38
KDM3B-201ENST00000314358 HPDP32754 393 aaPredicted RBP23.67■■□□□ 1.38
KDM3B-201ENST00000314358 SEPT14Q6ZU15 432 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 KRT23Q9C075 422 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 FAM169AQ9Y6X4 670 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 CCT6AP40227 531 aaKnown RBP23.67■■□□□ 1.38
KDM3B-201ENST00000314358 GEN1Q17RS7 908 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 KCNG4Q8TDN1 519 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 SIRT1Q96EB6 747 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 UIMC1Q96RL1 719 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 BMP2KLQ5H9B9 411 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 NEK11Q8NG66 645 aa23.67■■□□□ 1.38
KDM3B-201ENST00000314358 UBAP1LF5GYI3 381 aa23.66■■□□□ 1.38
KDM3B-201ENST00000314358 IVLP07476 585 aa23.66■■□□□ 1.38
KDM3B-201ENST00000314358 KRT9P35527 623 aa23.66■■□□□ 1.38
KDM3B-201ENST00000314358 ST5P78524 1137 aa23.66■■□□□ 1.38
KDM3B-201ENST00000314358 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.66■■□□□ 1.38
KDM3B-201ENST00000314358 CLGNO14967 610 aa23.66■■□□□ 1.38
KDM3B-201ENST00000314358 KRT5P13647 590 aa23.66■■□□□ 1.38
KDM3B-201ENST00000314358 SLC9C2Q5TAH2 1124 aa23.66■■□□□ 1.38
KDM3B-201ENST00000314358 ATP2A1O14983 1001 aa23.65■■□□□ 1.38
KDM3B-201ENST00000314358 SLU7O95391 586 aaKnown RBP23.65■■□□□ 1.38
KDM3B-201ENST00000314358 NOL3O60936 208 aaKnown RBP23.65■■□□□ 1.38
KDM3B-201ENST00000314358 ESR2Q92731 530 aa23.65■■□□□ 1.38
KDM3B-201ENST00000314358 PPP2R5CQ13362 524 aa23.65■■□□□ 1.38
KDM3B-201ENST00000314358 HELBQ8NG08 1087 aaPredicted RBP23.65■■□□□ 1.38
KDM3B-201ENST00000314358 PFDN4Q9NQP4 134 aa23.65■■□□□ 1.38
KDM3B-201ENST00000314358 NMIQ13287 307 aaPredicted RBP23.65■■□□□ 1.38
KDM3B-201ENST00000314358 TTC31Q49AM3 519 aaPredicted RBP23.65■■□□□ 1.38
KDM3B-201ENST00000314358 DDX12PQ92771 950 aa23.64■■□□□ 1.38
KDM3B-201ENST00000314358 PPP2R5DQ14738 602 aa23.64■■□□□ 1.38
KDM3B-201ENST00000314358 C14orf93Q9H972 538 aaKnown RBP23.64■■□□□ 1.38
KDM3B-201ENST00000314358 NAA16Q6N069 864 aaPredicted RBP23.64■■□□□ 1.37
KDM3B-201ENST00000314358 FAM200AQ8TCP9 573 aa23.64■■□□□ 1.37
KDM3B-201ENST00000314358 XRCC6P12956 609 aaKnown RBP eCLIP23.64■■□□□ 1.37
KDM3B-201ENST00000314358 TYRO3Q06418 890 aa23.64■■□□□ 1.37
KDM3B-201ENST00000314358 PSMD6Q15008 389 aa23.64■■□□□ 1.37
KDM3B-201ENST00000314358 CCDC152Q4G0S7 254 aa23.64■■□□□ 1.37
KDM3B-201ENST00000314358 MPHOSPH6Q99547 160 aaKnown RBP23.64■■□□□ 1.37
KDM3B-201ENST00000314358 RIMBP2O15034 1052 aa23.63■■□□□ 1.37
KDM3B-201ENST00000314358 F13A1P00488 732 aa23.63■■□□□ 1.37
KDM3B-201ENST00000314358 VIMP08670 466 aaKnown RBP23.63■■□□□ 1.37
KDM3B-201ENST00000314358 KRT86O43790 486 aa23.63■■□□□ 1.37
KDM3B-201ENST00000314358 ERCC3P19447 782 aa23.63■■□□□ 1.37
KDM3B-201ENST00000314358 ANKRD13DQ6ZTN6 518 aa23.63■■□□□ 1.37
KDM3B-201ENST00000314358 TRIM7Q9C029 511 aa23.63■■□□□ 1.37
KDM3B-201ENST00000314358 ATP6V1AP38606 617 aa23.63■■□□□ 1.37
KDM3B-201ENST00000314358 GSTO1P78417 241 aa23.63■■□□□ 1.37
KDM3B-201ENST00000314358 TTC36A6NLP5 189 aa23.62■■□□□ 1.37
KDM3B-201ENST00000314358 MAK16Q9BXY0 300 aaKnown RBP23.62■■□□□ 1.37
KDM3B-201ENST00000314358 MCMDC2Q4G0Z9 681 aa23.62■■□□□ 1.37
KDM3B-201ENST00000314358 SPTLC2O15270 562 aa23.62■■□□□ 1.37
KDM3B-201ENST00000314358 XAGE3Q8WTP9 111 aa23.62■■□□□ 1.37
KDM3B-201ENST00000314358 STMN4Q9H169 189 aaPredicted RBP23.62■■□□□ 1.37
KDM3B-201ENST00000314358 EBAG9O00559 213 aa23.62■■□□□ 1.37
KDM3B-201ENST00000314358 USP37Q86T82 979 aa23.62■■□□□ 1.37
KDM3B-201ENST00000314358 DTNBO60941 627 aa23.62■■□□□ 1.37
KDM3B-201ENST00000314358 SNX16P57768 344 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 C6orf50Q9HD87 102 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 TNRQ92752 1358 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 TTC21BQ7Z4L5 1316 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 U2AF2P26368 475 aaKnown RBP eCLIP23.61■■□□□ 1.373e-11■■■■■ 33.4
KDM3B-201ENST00000314358 KRT83P78385 493 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 ESYT1Q9BSJ8 1104 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 CTNND2Q9UQB3 1225 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 MAGEB6P1A0A0J9YX57 407 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 KRT2P35908 639 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 TAF12Q16514 161 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 SPDYE3A6NKU9 549 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 NUCB1Q02818 461 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 PIK3R4Q99570 1358 aa23.61■■□□□ 1.37
KDM3B-201ENST00000314358 UQCRFS1P1P0C7P4 283 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 NBPF11Q86T75 865 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 MAGEB6Q8N7X4 407 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 LONRF3Q496Y0 759 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 SAMD15Q9P1V8 674 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 CRCPO75575 148 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 HSPA1LP34931 641 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 IFNL2Q8IZJ0 200 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 CABLES1Q8TDN4 633 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 EPSTI1Q96J88 318 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 CLSTN2Q9H4D0 955 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 NSD2O96028 1365 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 PRPHP41219 470 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 LMBR1Q8WVP7 490 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 MAPK8IP1Q9UQF2 711 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 TTC14Q96N46 770 aa23.6■■□□□ 1.37
KDM3B-201ENST00000314358 LEO1Q8WVC0 666 aaPredicted RBP23.59■■□□□ 1.37
KDM3B-201ENST00000314358 COPS6Q7L5N1 327 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms