RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 RBSNQ9H1K0 784 aa14.69□□□□□ -0.06
RNF4-201ENST00000314289 TFIP11Q9UBB9 837 aaKnown RBP14.69□□□□□ -0.06
RNF4-201ENST00000314289 COL4A1P02462 1669 aa14.69□□□□□ -0.06
RNF4-201ENST00000314289 PHF14O94880 888 aa14.69□□□□□ -0.06
RNF4-201ENST00000314289 TBC1D9BQ66K14 1250 aa14.69□□□□□ -0.06
RNF4-201ENST00000314289 INCENPQ9NQS7 918 aa14.69□□□□□ -0.06
RNF4-201ENST00000314289 GNPATO15228 680 aa14.69□□□□□ -0.06
RNF4-201ENST00000314289 IGHMBP2P38935 993 aaKnown RBP14.69□□□□□ -0.06
RNF4-201ENST00000314289 RBM10P98175 930 aaKnown RBP14.68□□□□□ -0.06
RNF4-201ENST00000314289 PARP10Q53GL7 1025 aa14.68□□□□□ -0.06
RNF4-201ENST00000314289 PPP1R9BQ96SB3 815 aa14.68□□□□□ -0.06
RNF4-201ENST00000314289 AKAP11Q9UKA4 1901 aa14.68□□□□□ -0.06
RNF4-201ENST00000314289 MROH5Q6ZUA9 1318 aa14.68□□□□□ -0.06
RNF4-201ENST00000314289 FGFR2P21802 821 aa14.68□□□□□ -0.06
RNF4-201ENST00000314289 ADD2P35612 726 aa14.68□□□□□ -0.06
RNF4-201ENST00000314289 CHRNDQ07001 517 aa14.68□□□□□ -0.06
RNF4-201ENST00000314289 MEX3CQ5U5Q3 659 aaKnown RBP14.68□□□□□ -0.06
RNF4-201ENST00000314289 SPATA5Q8NB90 893 aa14.68□□□□□ -0.06
RNF4-201ENST00000314289 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.68□□□□□ -0.06
RNF4-201ENST00000314289 ZFYP08048 801 aaPredicted RBP14.67□□□□□ -0.06
RNF4-201ENST00000314289 SLC5A1P13866 664 aa14.67□□□□□ -0.06
RNF4-201ENST00000314289 PDE6AP16499 860 aa14.67□□□□□ -0.06
RNF4-201ENST00000314289 GUCY1B3Q02153 619 aa14.67□□□□□ -0.06
RNF4-201ENST00000314289 SLC51AQ86UW1 340 aa14.67□□□□□ -0.06
RNF4-201ENST00000314289 MAGEB6Q8N7X4 407 aa14.67□□□□□ -0.06
RNF4-201ENST00000314289 MBD3O95983 291 aa14.67□□□□□ -0.06
RNF4-201ENST00000314289 ZNF445P59923 1031 aa14.67□□□□□ -0.06
RNF4-201ENST00000314289 IMMTQ16891 758 aaKnown RBP14.67□□□□□ -0.06
RNF4-201ENST00000314289 ZNF652Q9Y2D9 606 aa14.67□□□□□ -0.06
RNF4-201ENST00000314289 LAMA4Q16363 1823 aa14.67□□□□□ -0.06
RNF4-201ENST00000314289 KDM4AO75164 1064 aa14.67□□□□□ -0.06
RNF4-201ENST00000314289 EXOSC10Q01780 885 aaKnown RBP14.67□□□□□ -0.06
RNF4-201ENST00000314289 SPEF2Q9C093 1822 aa14.66□□□□□ -0.06
RNF4-201ENST00000314289 GYG1P46976 350 aa14.66□□□□□ -0.06
RNF4-201ENST00000314289 CEBPZQ03701 1054 aaKnown RBP14.66□□□□□ -0.06
RNF4-201ENST00000314289 LRRFIP1Q32MZ4 808 aaKnown RBP14.66□□□□□ -0.06
RNF4-201ENST00000314289 BCL2L12Q9HB09 334 aa14.66□□□□□ -0.06
RNF4-201ENST00000314289 CCNL1Q9UK58 526 aaPredicted RBP14.66□□□□□ -0.06
RNF4-201ENST00000314289 ZNF213O14771 459 aa14.66□□□□□ -0.06
RNF4-201ENST00000314289 MIGA1Q8NAN2 632 aa14.66□□□□□ -0.06
RNF4-201ENST00000314289 ALDH8A1Q9H2A2 487 aaPredicted RBP14.66□□□□□ -0.06
RNF4-201ENST00000314289 R3HCC1Q9Y3T6 440 aaKnown RBP14.66□□□□□ -0.06
RNF4-201ENST00000314289 CTDNEP1O95476 244 aa14.65□□□□□ -0.06
RNF4-201ENST00000314289 ARID4AP29374 1257 aaPredicted RBP14.65□□□□□ -0.06
RNF4-201ENST00000314289 FAM184AQ8NB25 1140 aa14.65□□□□□ -0.06
RNF4-201ENST00000314289 CELF1Q92879 486 aaKnown RBP14.65□□□□□ -0.06
RNF4-201ENST00000314289 AIDAQ96BJ3 306 aa14.65□□□□□ -0.06
RNF4-201ENST00000314289 ARMT1Q9H993 441 aa14.65□□□□□ -0.06
RNF4-201ENST00000314289 ABCF2Q9UG63 623 aa14.65□□□□□ -0.06
RNF4-201ENST00000314289 ATP6V1DQ9Y5K8 247 aa14.65□□□□□ -0.06
RNF4-201ENST00000314289 NWD2Q9ULI1 1742 aa14.65□□□□□ -0.06
RNF4-201ENST00000314289 H3BQV1 296 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 PRKAB2O43741 272 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 HMGB1P09429 215 aaKnown RBP14.64□□□□□ -0.07
RNF4-201ENST00000314289 RXRAP19793 462 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 IFFO2Q5TF58 517 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 FNBP4Q8N3X1 1017 aaPredicted RBP14.64□□□□□ -0.07
RNF4-201ENST00000314289 NBPF3Q9H094 633 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 NPHP1O15259 732 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 PRC1O43663 620 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 PDIA3P30101 505 aaKnown RBP14.64□□□□□ -0.07
RNF4-201ENST00000314289 TTC6Q86TZ1 520 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 TBC1D10CQ8IV04 446 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 CTNNA3Q9UI47 895 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 ABCC12Q96J65 1359 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 PTPDC1A2A3K4 754 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 OFD1O75665 1012 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 MBD4O95243 580 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 TTF1Q15361 905 aaPredicted RBP14.64□□□□□ -0.07
RNF4-201ENST00000314289 ARID3AQ99856 593 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 JAG2Q9Y219 1238 aa14.64□□□□□ -0.07
RNF4-201ENST00000314289 UQCRFS1P1P0C7P4 283 aa14.63□□□□□ -0.07
RNF4-201ENST00000314289 OTUD7BQ6GQQ9 843 aa14.63□□□□□ -0.07
RNF4-201ENST00000314289 LRSAM1Q6UWE0 723 aa14.63□□□□□ -0.07
RNF4-201ENST00000314289 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.63□□□□□ -0.07
RNF4-201ENST00000314289 RALYLQ86SE5 291 aaKnown RBP14.63□□□□□ -0.07
RNF4-201ENST00000314289 NSUN7Q8NE18 718 aaKnown RBP14.63□□□□□ -0.07
RNF4-201ENST00000314289 PFKFB2O60825 505 aa14.63□□□□□ -0.07
RNF4-201ENST00000314289 PDCP20941 246 aa14.63□□□□□ -0.07
RNF4-201ENST00000314289 KLRK1P26718 216 aa14.63□□□□□ -0.07
RNF4-201ENST00000314289 ANTXR2P58335 489 aa14.63□□□□□ -0.07
RNF4-201ENST00000314289 NBPF5PQ86XG9 351 aaPredicted RBP14.63□□□□□ -0.07
RNF4-201ENST00000314289 ANKRD18AQ8IVF6 992 aa14.63□□□□□ -0.07
RNF4-201ENST00000314289 AK7Q96M32 723 aa14.63□□□□□ -0.07
RNF4-201ENST00000314289 FTOQ9C0B1 505 aaKnown RBP eCLIP14.63□□□□□ -0.07
RNF4-201ENST00000314289 GJB4Q9NTQ9 266 aa14.63□□□□□ -0.07
RNF4-201ENST00000314289 FAM13BQ9NYF5 915 aa14.63□□□□□ -0.07
RNF4-201ENST00000314289 LRP2BPQ9P2M1 347 aa14.63□□□□□ -0.07
RNF4-201ENST00000314289 DDX60Q8IY21 1712 aaKnown RBP14.62□□□□□ -0.07
RNF4-201ENST00000314289 TCRBV5S4A2TA0A5A2 114 aa14.62□□□□□ -0.07
RNF4-201ENST00000314289 ZPR1O75312 459 aa14.62□□□□□ -0.07
RNF4-201ENST00000314289 CTDSPL2Q05D32 466 aa14.62□□□□□ -0.07
RNF4-201ENST00000314289 ZSCAN25Q6NSZ9 544 aa14.62□□□□□ -0.07
RNF4-201ENST00000314289 CCDC144CPQ8IYA2 1237 aa14.62□□□□□ -0.07
RNF4-201ENST00000314289 PDCL3Q9H2J4 239 aa14.62□□□□□ -0.07
RNF4-201ENST00000314289 SENP2Q9HC62 589 aa14.62□□□□□ -0.07
RNF4-201ENST00000314289 KLF18A0A0U1RQI7 1052 aa14.62□□□□□ -0.07
RNF4-201ENST00000314289 UBE2HP62256 183 aa14.62□□□□□ -0.07
RNF4-201ENST00000314289 SETDB2Q96T68 719 aa14.62□□□□□ -0.07
RNF4-201ENST00000314289 B4E1Z4 1266 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms