RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 FANCCQ00597 558 aa16.67■□□□□ 0.26
SCUBE2-201ENST00000309263 NFATC2IPQ8NCF5 419 aa16.67■□□□□ 0.26
SCUBE2-201ENST00000309263 MED23Q9ULK4 1368 aa16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 KLF18A0A0U1RQI7 1052 aa16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 E7EWF7 191 aa16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 KIF2AO00139 706 aaPredicted RBP16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 SKIDA1Q1XH10 827 aa16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 DDX21Q9NR30 783 aaKnown RBP eCLIP16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 GNG11P61952 73 aa16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 ANKRD13DQ6ZTN6 518 aa16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 IP6K1Q92551 441 aa16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 APPP05067 770 aa16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 HOXB7P09629 217 aa16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 PDIA3P30101 505 aaKnown RBP16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 NAA16Q6N069 864 aaPredicted RBP16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 CCDC150Q8NCX0 1101 aa16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 ZNF594Q96JF6 807 aaPredicted RBP16.66■□□□□ 0.26
SCUBE2-201ENST00000309263 ATP5JP18859 108 aa16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 STRCP1A6NGW2 1772 aa16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 PNMA6AP0CW24 399 aaPredicted RBP16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 TOP1P11387 765 aaKnown RBP16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 IRX5P78411 483 aaPredicted RBP16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 CABLES1Q8TDN4 633 aa16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 AIFM3Q96NN9 605 aa16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 PAG1Q9NWQ8 432 aa16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 GTF2E1P29083 439 aaPredicted RBP16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 TNNT3P45378 269 aaPredicted RBP16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 RALYLQ86SE5 291 aaKnown RBP16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 CCDC82Q8N4S0 544 aa16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 CALCOCO1Q9P1Z2 691 aa16.65■□□□□ 0.26
SCUBE2-201ENST00000309263 ZNF609O15014 1411 aa16.64■□□□□ 0.25
SCUBE2-201ENST00000309263 IFIT1P09914 478 aaKnown RBP16.64■□□□□ 0.25
SCUBE2-201ENST00000309263 EVCP57679 992 aa16.64■□□□□ 0.25
SCUBE2-201ENST00000309263 KARSQ15046 597 aaKnown RBP16.64■□□□□ 0.25
SCUBE2-201ENST00000309263 MON2Q7Z3U7 1717 aa16.64■□□□□ 0.25
SCUBE2-201ENST00000309263 FMR1NBQ8N0W7 255 aaPredicted RBP16.64■□□□□ 0.25
SCUBE2-201ENST00000309263 TTC5Q8N0Z6 440 aa16.64■□□□□ 0.25
SCUBE2-201ENST00000309263 ENGASEQ8NFI3 743 aa16.64■□□□□ 0.25
SCUBE2-201ENST00000309263 PXDNLA1KZ92 1463 aa16.64■□□□□ 0.25
SCUBE2-201ENST00000309263 HNRNPH2P55795 449 aaKnown RBP16.64■□□□□ 0.25
SCUBE2-201ENST00000309263 DPF2Q92785 391 aa16.64■□□□□ 0.25
SCUBE2-201ENST00000309263 HMGB1P09429 215 aaKnown RBP16.63■□□□□ 0.25
SCUBE2-201ENST00000309263 ETF1P62495 437 aaKnown RBP16.63■□□□□ 0.25
SCUBE2-201ENST00000309263 PTPN12Q05209 780 aaKnown RBP16.63■□□□□ 0.25
SCUBE2-201ENST00000309263 PNOCQ13519 176 aa16.63■□□□□ 0.25
SCUBE2-201ENST00000309263 ADALQ6DHV7 355 aa16.63■□□□□ 0.25
SCUBE2-201ENST00000309263 RGPD8O14715 1765 aaPredicted RBP16.63■□□□□ 0.25
SCUBE2-201ENST00000309263 FMN2Q9NZ56 1722 aa16.63■□□□□ 0.25
SCUBE2-201ENST00000309263 CPLX3Q8WVH0 158 aa16.63■□□□□ 0.25
SCUBE2-201ENST00000309263 HSPD1P10809 573 aaKnown RBP16.63■□□□□ 0.25
SCUBE2-201ENST00000309263 SYKP43405 635 aa16.63■□□□□ 0.25
SCUBE2-201ENST00000309263 KBTBD3Q8NAB2 608 aa16.63■□□□□ 0.25
SCUBE2-201ENST00000309263 SMARCC2Q8TAQ2 1214 aa16.63■□□□□ 0.25
SCUBE2-201ENST00000309263 CARMIL3Q8ND23 1372 aa16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 TMEM232C9JQI7 657 aa16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 PFKFB1P16118 471 aa16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 ILDR1Q86SU0 546 aaPredicted RBP16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 ANKRD24Q8TF21 1146 aa16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 DESI2Q9BSY9 194 aa16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 TMEM51Q9NW97 253 aa16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 LINC00301Q8NCQ3 95 aa16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 CLIC6Q96NY7 704 aa16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 C1orf167Q5SNV9 1468 aa16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 CHRNA2Q15822 529 aa16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 OLFM4Q6UX06 510 aa16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 LLPHQ9BRT6 129 aaKnown RBP16.62■□□□□ 0.25
SCUBE2-201ENST00000309263 ADKP55263 362 aaKnown RBP16.61■□□□□ 0.25
SCUBE2-201ENST00000309263 TRIM34Q9BYJ4 488 aa16.61■□□□□ 0.25
SCUBE2-201ENST00000309263 TOMM22Q9NS69 142 aa16.61■□□□□ 0.25
SCUBE2-201ENST00000309263 USPL1Q5W0Q7 1092 aa16.61■□□□□ 0.25
SCUBE2-201ENST00000309263 MICU3Q86XE3 530 aa16.61■□□□□ 0.25
SCUBE2-201ENST00000309263 KCNG4Q8TDN1 519 aa16.61■□□□□ 0.25
SCUBE2-201ENST00000309263 RAPGEF4Q8WZA2 1011 aa16.61■□□□□ 0.25
SCUBE2-201ENST00000309263 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
SCUBE2-201ENST00000309263 SLAIN2Q9P270 581 aa16.61■□□□□ 0.25
SCUBE2-201ENST00000309263 FHOD1Q9Y613 1164 aa16.61■□□□□ 0.25
SCUBE2-201ENST00000309263 PRC1O43663 620 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 MYSM1Q5VVJ2 828 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 KRT28Q7Z3Y7 464 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 FANCLQ9NW38 375 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 FDPSP14324 419 aaKnown RBP16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 ST5P78524 1137 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 TSGA10IPQ3SY00 556 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 AMOTQ4VCS5 1084 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 ZNF790Q6PG37 636 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 PHKBQ93100 1093 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 IMPACTQ9P2X3 320 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 CEMIPQ8WUJ3 1361 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 CASQ1P31415 396 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 LMAN1P49257 510 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 MCM6Q14566 821 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 ZNF827Q17R98 1081 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 TRMT44Q8IYL2 757 aaKnown RBP16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 HAUS7Q99871 368 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 OSBPL5Q9H0X9 879 aaPredicted RBP16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 ERBB3P21860 1342 aa16.6■□□□□ 0.25
SCUBE2-201ENST00000309263 NFXL1Q6ZNB6 911 aa16.59■□□□□ 0.25
SCUBE2-201ENST00000309263 KRBA2Q6ZNG9 492 aa16.59■□□□□ 0.25
SCUBE2-201ENST00000309263 LZTFL1Q9NQ48 299 aa16.59■□□□□ 0.25
SCUBE2-201ENST00000309263 GOLGB1Q14789 3259 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms