RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 ZFYP08048 801 aaPredicted RBP15.47■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 ZAP70P43403 619 aa15.47■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 GYG1P46976 350 aa15.47■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 BCAMP50895 628 aa15.47■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 ANAPC15P60006 121 aa15.47■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 DALRD3Q5D0E6 543 aaKnown RBP15.47■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 DPP8Q6V1X1 898 aaPredicted RBP15.47■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 KIAA1211Q6ZU35 1233 aa15.47■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 GPR101Q96P66 508 aaPredicted RBP15.47■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 ANO2Q9NQ90 1003 aa15.47■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 NDUFB9Q9Y6M9 179 aa15.47■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 FKBP4Q02790 459 aaKnown RBP eCLIP15.46■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 GRIPAP1Q4V328 841 aa15.46■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 CCDC93Q567U6 631 aa15.46■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 FAM227BQ96M60 508 aa15.46■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 HELLSQ9NRZ9 838 aa15.46■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
SHANK2-AS3-201ENST00000307548 RNF113AO15541 343 aaKnown RBP15.45■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 MCCP23508 829 aa15.45■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 ZMYM1Q5SVZ6 1142 aa15.45■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 SYT17Q9BSW7 474 aa15.45■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 TMX4Q9H1E5 349 aaPredicted RBP15.45■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 ANTXR1Q9H6X2 564 aa15.45■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 GNL3LQ9NVN8 582 aaKnown RBP15.45■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 HMG20BQ9P0W2 317 aa15.45■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 A0A0D9SFI3 127 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 SEMA3EO15041 775 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 CYP2E1P05181 493 aaPredicted RBP15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 HSPA4P34932 840 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 MCMDC2Q4G0Z9 681 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 CAVIN4Q5BKX8 364 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 SPATA5Q8NB90 893 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 SNX21Q969T3 373 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 PDS5AQ29RF7 1337 aaKnown RBP15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 ARFGEF1Q9Y6D6 1849 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 C6orf229H3BNL8 230 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 HIBADHP31937 336 aaKnown RBP15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 RASGRF1Q13972 1273 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 BECN1Q14457 450 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 RABEP1Q15276 862 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 SOGA3Q5TF21 947 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 ZSCAN25Q6NSZ9 544 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 RTKN2Q8IZC4 609 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 MAP4K1Q92918 833 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 KCNB2Q92953 911 aa15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 COL1A1P02452 1464 aaPredicted RBP15.44■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 PI16Q6UXB8 463 aa15.43■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 PSMD1Q99460 953 aa15.43■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.43■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 WWC3Q9ULE0 1092 aa15.43■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 CCDC171Q6TFL3 1326 aa15.43■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 IGSF3O75054 1194 aa15.42■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 TDRD7Q8NHU6 1098 aaKnown RBP15.42■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 BCS1LQ9Y276 419 aa15.42■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 FER1L6Q2WGJ9 1857 aa15.42■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 IL1R1P14778 569 aa15.41■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 PTH1RQ03431 593 aa15.41■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 UBE3CQ15386 1083 aa15.41■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 DENND2AQ9ULE3 1009 aa15.41■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 NFKBIEO00221 500 aa15.41■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 NECTIN1Q15223 517 aa15.41■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 WASHC4Q2M389 1173 aa15.41■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 ZNF804AQ7Z570 1209 aa15.41■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 SUPT20HQ8NEM7 779 aa15.41■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 EYA3Q99504 573 aa15.41■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 CD209Q9NNX6 404 aa15.41■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 PIH1D3Q9NQM4 214 aaKnown RBP15.41■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 RIMBP2O15034 1052 aa15.4■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 ADD2P35612 726 aa15.4■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 KIAA2012Q0VF49 1180 aa15.4■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 ZNF589Q86UQ0 364 aaPredicted RBP15.4■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 VPS37DQ86XT2 251 aa15.4■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 APPBP2Q92624 585 aa15.4■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 ZC3H12CQ9C0D7 883 aaKnown RBP15.4■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 COA1Q9GZY4 146 aa15.4■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 IQSEC3Q9UPP2 1182 aaPredicted RBP15.4■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 LTBP3Q9NS15 1303 aa15.4■□□□□ 0.06
SHANK2-AS3-201ENST00000307548 TMED8Q6PL24 325 aaPredicted RBP15.39■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 TBC1D2Q9BYX2 928 aa15.39■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 CHGBP05060 677 aa15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 MAP3K12Q12852 859 aa15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 OSBP2Q969R2 916 aa15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 SEC62Q99442 399 aaKnown RBP15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 DSCC1Q9BVC3 393 aa15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 VPS33BQ9H267 617 aa15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 DAXXQ9UER7 740 aaPredicted RBP15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 COL4A5P29400 1685 aa15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 MYH7P12883 1935 aa15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 TCRBV5S4A2TA0A5A2 114 aa15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 AOC3Q16853 763 aa15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 TSGA10IPQ3SY00 556 aa15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 SLC9C2Q5TAH2 1124 aa15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 PALD1Q9ULE6 856 aa15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 RBM8AQ9Y5S9 174 aaKnown RBP15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 U3KPZ7 1027 aaPredicted RBP15.38■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 MAST3O60307 1309 aa15.37■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 DOCK2Q92608 1830 aa15.37■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 CHD4Q14839 1912 aa15.37■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 PDE6AP16499 860 aa15.37■□□□□ 0.05
SHANK2-AS3-201ENST00000307548 DOK7Q18PE1 504 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms