RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 BIN2Q9UBW5 565 aaPredicted RBP10.79□□□□□ -0.68
PTPRE-202ENST00000306042 CEP131Q9UPN4 1083 aa10.79□□□□□ -0.68
PTPRE-202ENST00000306042 VWDEQ8N2E2 1590 aa10.79□□□□□ -0.68
PTPRE-202ENST00000306042 B4DLN1 442 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 C21orf2O43822 256 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 MRPL12P52815 198 aaKnown RBP10.78□□□□□ -0.68
PTPRE-202ENST00000306042 HMGN5P82970 282 aaKnown RBP10.78□□□□□ -0.68
PTPRE-202ENST00000306042 UBE4AQ14139 1066 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 SUSD4Q5VX71 490 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 DEFB132Q7Z7B7 95 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 RBM8AQ9Y5S9 174 aaKnown RBP10.78□□□□□ -0.68
PTPRE-202ENST00000306042 KRT85P78386 507 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 SKAP1Q86WV1 359 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 FBXO3Q9UK99 471 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 CSADQ9Y600 493 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 GOLGA6L3A6NEY3 463 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 MSNP26038 577 aaKnown RBP10.78□□□□□ -0.68
PTPRE-202ENST00000306042 OTUD7BQ6GQQ9 843 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 USP48Q86UV5 1035 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 CARMIL3Q8ND23 1372 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 SEC31BQ9NQW1 1179 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 USP40Q9NVE5 1235 aa10.78□□□□□ -0.68
PTPRE-202ENST00000306042 GRAPQ13588 217 aa10.77□□□□□ -0.68
PTPRE-202ENST00000306042 GRAPLQ8TC17 118 aaPredicted RBP10.77□□□□□ -0.68
PTPRE-202ENST00000306042 RAB34Q9BZG1 259 aa10.77□□□□□ -0.68
PTPRE-202ENST00000306042 ARMT1Q9H993 441 aa10.77□□□□□ -0.68
PTPRE-202ENST00000306042 ARHGEF10LQ9HCE6 1279 aa10.77□□□□□ -0.68
PTPRE-202ENST00000306042 LIMCH1Q9UPQ0 1083 aa10.77□□□□□ -0.68
PTPRE-202ENST00000306042 CPDO75976 1380 aa10.77□□□□□ -0.68
PTPRE-202ENST00000306042 PPP4R3AQ6IN85 833 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 RAB11FIP4Q86YS3 637 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 DBNDD1Q9H9R9 158 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 CFAP45Q9UL16 551 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 ZBTB43O43298 467 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 SCNN1DP51172 638 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 KIF22Q14807 665 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 EZH2Q15910 746 aaKnown RBP10.77□□□□□ -0.69
PTPRE-202ENST00000306042 MED14O60244 1454 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 DEPDC5O75140 1603 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 CCDC171Q6TFL3 1326 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 KLF18A0A0U1RQI7 1052 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 ZAP70P43403 619 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 BCAMP50895 628 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 HLFQ16534 295 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 APPBP2Q92624 585 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 HELLSQ9NRZ9 838 aa10.77□□□□□ -0.69
PTPRE-202ENST00000306042 PDE8BO95263 885 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 PPP1R12BO60237 982 aaPredicted RBP10.76□□□□□ -0.69
PTPRE-202ENST00000306042 BAG4O95429 457 aaKnown RBP10.76□□□□□ -0.69
PTPRE-202ENST00000306042 ZNF853P0CG23 659 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 TMEM266Q2M3C6 531 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 LRRC24Q50LG9 513 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 DCAF15Q66K64 600 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 VTI1AQ96AJ9 217 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 ESYT1Q9BSJ8 1104 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 IPO7O95373 1038 aaKnown RBP10.76□□□□□ -0.69
PTPRE-202ENST00000306042 TBC1D9BQ66K14 1250 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 MAPKAPK5Q8IW41 473 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 BRF1Q92994 677 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 SLC26A6Q9BXS9 759 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 IQSEC2Q5JU85 1478 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 RAD17O75943 681 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 PDE4CQ08493 712 aa10.76□□□□□ -0.69
PTPRE-202ENST00000306042 RC3H1Q5TC82 1133 aaKnown RBP10.76□□□□□ -0.69
PTPRE-202ENST00000306042 ABCC4O15439 1325 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 SMC5Q8IY18 1101 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 IQGAP1P46940 1657 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 MATR3P43243 847 aaKnown RBP eCLIP10.75□□□□□ -0.69
PTPRE-202ENST00000306042 RTN1Q16799 776 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 CCDC102BQ68D86 513 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 TGFBRAP1Q8WUH2 860 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 NAT10Q9H0A0 1025 aaKnown RBP10.75□□□□□ -0.69
PTPRE-202ENST00000306042 CALM1P0DP23 149 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 CALM2P0DP24 149 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 CALM3P0DP25 149 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 CIAPIN1Q6FI81 312 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 ORC3Q9UBD5 711 aaPredicted RBP10.75□□□□□ -0.69
PTPRE-202ENST00000306042 RAD50Q92878 1312 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 GUCY1B3Q02153 619 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 SLC16A10Q8TF71 515 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 SAMM50Q9Y512 469 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 IVNS1ABPQ9Y6Y0 642 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 LRRC7Q96NW7 1537 aa10.75□□□□□ -0.69
PTPRE-202ENST00000306042 TCP10L2B9ZVM9 353 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 PRC1O43663 620 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 STIM1Q13586 685 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 SLC15A2Q16348 729 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 KBTBD3Q8NAB2 608 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 NFIXQ14938 502 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 ZYXQ15942 572 aaKnown RBP10.74□□□□□ -0.69
PTPRE-202ENST00000306042 FERMT3Q86UX7 667 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 SMARCC2Q8TAQ2 1214 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 SSH3Q8TE77 659 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 LARP6Q9BRS8 491 aaKnown RBP10.74□□□□□ -0.69
PTPRE-202ENST00000306042 LRRC2Q9BYS8 371 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 TANGO6Q9C0B7 1094 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 RBM27Q9P2N5 1060 aaKnown RBP10.74□□□□□ -0.69
PTPRE-202ENST00000306042 GPAA1O43292 621 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 GRIPAP1Q4V328 841 aa10.74□□□□□ -0.69
PTPRE-202ENST00000306042 PLEKHM2Q8IWE5 1019 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms