RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 MARCKSP29966 332 aaPredicted RBP16.62■□□□□ 0.25
CDT1-201ENST00000301019 CCT4P50991 539 aaKnown RBP16.62■□□□□ 0.25
CDT1-201ENST00000301019 CHMP4BP1P59074 171 aa16.62■□□□□ 0.25
CDT1-201ENST00000301019 CCDC129Q6ZRS4 1044 aa16.62■□□□□ 0.25
CDT1-201ENST00000301019 CCDC150Q8NCX0 1101 aa16.62■□□□□ 0.25
CDT1-201ENST00000301019 GOLGA1Q92805 767 aa16.62■□□□□ 0.25
CDT1-201ENST00000301019 TTC21BQ7Z4L5 1316 aa16.62■□□□□ 0.25
CDT1-201ENST00000301019 KDM4FA0A1W2PPD8 638 aa16.62■□□□□ 0.25
CDT1-201ENST00000301019 TOP1P11387 765 aaKnown RBP16.62■□□□□ 0.25
CDT1-201ENST00000301019 SLC27A2O14975 620 aa16.61■□□□□ 0.25
CDT1-201ENST00000301019 CORO7P57737 925 aa16.61■□□□□ 0.25
CDT1-201ENST00000301019 AXDND1Q5T1B0 1012 aaPredicted RBP16.61■□□□□ 0.25
CDT1-201ENST00000301019 MMS22LQ6ZRQ5 1243 aa16.61■□□□□ 0.25
CDT1-201ENST00000301019 RBM43Q6ZSC3 357 aaKnown RBP16.61■□□□□ 0.25
CDT1-201ENST00000301019 TADA2BQ86TJ2 420 aa16.61■□□□□ 0.25
CDT1-201ENST00000301019 UBXN6Q9BZV1 441 aa16.61■□□□□ 0.25
CDT1-201ENST00000301019 PSDA5PKW4 1024 aaPredicted RBP16.61■□□□□ 0.25
CDT1-201ENST00000301019 TOB2Q14106 344 aaPredicted RBP16.61■□□□□ 0.25
CDT1-201ENST00000301019 SSBP05455 408 aaKnown RBP eCLIP16.6■□□□□ 0.25
CDT1-201ENST00000301019 ATP6V1AP38606 617 aa16.6■□□□□ 0.25
CDT1-201ENST00000301019 VSNL1P62760 191 aa16.6■□□□□ 0.25
CDT1-201ENST00000301019 USP44Q9H0E7 712 aa16.6■□□□□ 0.25
CDT1-201ENST00000301019 ZSCAN16Q9H4T2 348 aaPredicted RBP16.6■□□□□ 0.25
CDT1-201ENST00000301019 A0A0D9SFI3 127 aa16.6■□□□□ 0.25
CDT1-201ENST00000301019 RESTQ13127 1097 aa16.6■□□□□ 0.25
CDT1-201ENST00000301019 TMED8Q6PL24 325 aaPredicted RBP16.6■□□□□ 0.25
CDT1-201ENST00000301019 OSBPL5Q9H0X9 879 aaPredicted RBP16.6■□□□□ 0.25
CDT1-201ENST00000301019 CFAP45Q9UL16 551 aa16.6■□□□□ 0.25
CDT1-201ENST00000301019 KIF4BQ2VIQ3 1234 aa16.6■□□□□ 0.25
CDT1-201ENST00000301019 Q6ZUG5 572 aa16.6■□□□□ 0.25
CDT1-201ENST00000301019 FSD1Q9BTV5 496 aa16.6■□□□□ 0.25
CDT1-201ENST00000301019 KCNA6P17658 529 aa16.59■□□□□ 0.25
CDT1-201ENST00000301019 TXLNAP40222 546 aa16.59■□□□□ 0.25
CDT1-201ENST00000301019 CD248Q9HCU0 757 aa16.59■□□□□ 0.25
CDT1-201ENST00000301019 AATKQ6ZMQ8 1374 aa16.59■□□□□ 0.25
CDT1-201ENST00000301019 MYO1FO00160 1098 aa16.59■□□□□ 0.25
CDT1-201ENST00000301019 SKAP2O75563 359 aaPredicted RBP16.59■□□□□ 0.25
CDT1-201ENST00000301019 ZNF589Q86UQ0 364 aaPredicted RBP16.59■□□□□ 0.25
CDT1-201ENST00000301019 STAP2Q9UGK3 403 aa16.59■□□□□ 0.25
CDT1-201ENST00000301019 NPHP4O75161 1426 aaPredicted RBP16.59■□□□□ 0.25
CDT1-201ENST00000301019 LRRIQ3A6PVS8 624 aaPredicted RBP16.58■□□□□ 0.25
CDT1-201ENST00000301019 HNRNPH1P31943 449 aaKnown RBP16.58■□□□□ 0.25
CDT1-201ENST00000301019 AACSQ86V21 672 aa16.58■□□□□ 0.25
CDT1-201ENST00000301019 LTV1Q96GA3 475 aaPredicted RBP16.58■□□□□ 0.25
CDT1-201ENST00000301019 ABL1P00519 1130 aa16.58■□□□□ 0.24
CDT1-201ENST00000301019 CASP8Q14790 479 aa16.58■□□□□ 0.24
CDT1-201ENST00000301019 CPLX2Q6PUV4 134 aaKnown RBP16.58■□□□□ 0.24
CDT1-201ENST00000301019 TRMT44Q8IYL2 757 aaKnown RBP16.58■□□□□ 0.24
CDT1-201ENST00000301019 PCDHA7Q9UN72 937 aa16.58■□□□□ 0.24
CDT1-201ENST00000301019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.58■□□□□ 0.24
CDT1-201ENST00000301019 ADCY9O60503 1353 aa16.58■□□□□ 0.24
CDT1-201ENST00000301019 COBLO75128 1261 aa16.58■□□□□ 0.24
CDT1-201ENST00000301019 RNF40O75150 1001 aa16.58■□□□□ 0.24
CDT1-201ENST00000301019 SLC3A2P08195 630 aaKnown RBP16.58■□□□□ 0.24
CDT1-201ENST00000301019 FAM160A1Q05DH4 1040 aa16.58■□□□□ 0.24
CDT1-201ENST00000301019 SF3A3Q12874 501 aaKnown RBP eCLIP16.58■□□□□ 0.245e-7■■■■■ 28.2
CDT1-201ENST00000301019 SPECC1Q5M775 1068 aa16.58■□□□□ 0.24
CDT1-201ENST00000301019 HDXQ7Z353 690 aa16.58■□□□□ 0.24
CDT1-201ENST00000301019 RPAINQ86UA6 219 aa16.58■□□□□ 0.24
CDT1-201ENST00000301019 PHLPP2Q6ZVD8 1323 aa16.58■□□□□ 0.24
CDT1-201ENST00000301019 TEFQ10587 303 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 STK38Q15208 465 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 KLHDC4Q8TBB5 520 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 RUFY2Q8WXA3 655 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 FAM107BQ9H098 131 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 MRPL44Q9H9J2 332 aaKnown RBP16.57■□□□□ 0.24
CDT1-201ENST00000301019 MRFAP1Q9Y605 127 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 KIAA0232Q92628 1395 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 NEBLO76041 1014 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 ZNF569Q5MCW4 686 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 BEND6Q5SZJ8 279 aaPredicted RBP16.57■□□□□ 0.24
CDT1-201ENST00000301019 FAM43BQ6ZT52 329 aaPredicted RBP16.57■□□□□ 0.24
CDT1-201ENST00000301019 NUDT16Q96DE0 195 aaKnown RBP16.57■□□□□ 0.24
CDT1-201ENST00000301019 ANKZF1Q9H8Y5 726 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.57■□□□□ 0.24
CDT1-201ENST00000301019 CD163L1Q9NR16 1453 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 SOWAHDA6NJG2 315 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 EXOC5O00471 708 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 CHL1O00533 1208 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 ACTN3Q08043 901 aaPredicted RBP16.57■□□□□ 0.24
CDT1-201ENST00000301019 NECTIN1Q15223 517 aa16.57■□□□□ 0.24
CDT1-201ENST00000301019 BAG1Q99933 345 aaPredicted RBP16.57■□□□□ 0.24
CDT1-201ENST00000301019 XRN1Q8IZH2 1706 aaKnown RBP16.56■□□□□ 0.24
CDT1-201ENST00000301019 ZNF827Q17R98 1081 aa16.56■□□□□ 0.24
CDT1-201ENST00000301019 TLR7Q9NYK1 1049 aaKnown RBP16.56■□□□□ 0.24
CDT1-201ENST00000301019 CLIC4Q9Y696 253 aa16.56■□□□□ 0.24
CDT1-201ENST00000301019 CAPN7Q9Y6W3 813 aa16.56■□□□□ 0.24
CDT1-201ENST00000301019 COL3A1P02461 1466 aaPredicted RBP16.56■□□□□ 0.24
CDT1-201ENST00000301019 TPM1P09493 284 aa16.56■□□□□ 0.24
CDT1-201ENST00000301019 MAP3K9P80192 1104 aa16.56■□□□□ 0.24
CDT1-201ENST00000301019 HSP90AB2PQ58FF8 381 aa16.56■□□□□ 0.24
CDT1-201ENST00000301019 CDC5LQ99459 802 aaKnown RBP16.56■□□□□ 0.24
CDT1-201ENST00000301019 KIAA1468Q9P260 1216 aa16.56■□□□□ 0.24
CDT1-201ENST00000301019 EIF3JO75822 258 aaKnown RBP16.55■□□□□ 0.24
CDT1-201ENST00000301019 SCRN1Q12765 414 aa16.55■□□□□ 0.24
CDT1-201ENST00000301019 NCAPH2Q6IBW4 605 aa16.55■□□□□ 0.24
CDT1-201ENST00000301019 GIMAP7Q8NHV1 300 aa16.55■□□□□ 0.24
CDT1-201ENST00000301019 SMARCC1Q92922 1105 aaPredicted RBP16.55■□□□□ 0.24
CDT1-201ENST00000301019 CEP57Q86XR8 500 aa16.55■□□□□ 0.24
CDT1-201ENST00000301019 NOA1Q8NC60 698 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms