RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PRIMPOLQ96LW4 560 aa15.12■□□□□ 0.01
HIF3A-204ENST00000300862 RCOR1Q9UKL0 485 aa15.12■□□□□ 0.01
HIF3A-204ENST00000300862 TNS2Q63HR2 1409 aa15.12■□□□□ 0.01
HIF3A-204ENST00000300862 PRC1O43663 620 aa15.11■□□□□ 0.01
HIF3A-204ENST00000300862 GTF2F1P35269 517 aaKnown RBP eCLIP15.11■□□□□ 0.01
HIF3A-204ENST00000300862 ATP2B3Q16720 1220 aa15.11■□□□□ 0.01
HIF3A-204ENST00000300862 IMMTQ16891 758 aaKnown RBP15.11■□□□□ 0.01
HIF3A-204ENST00000300862 CCDC186Q7Z3E2 898 aa15.11■□□□□ 0.01
HIF3A-204ENST00000300862 CARMIL3Q8ND23 1372 aa15.11■□□□□ 0.01
HIF3A-204ENST00000300862 POLR3DP05423 398 aaPredicted RBP15.11■□□□□ 0.01
HIF3A-204ENST00000300862 ITGA6P23229 1130 aa15.11■□□□□ 0.01
HIF3A-204ENST00000300862 MCAMP43121 646 aa15.11■□□□□ 0.01
HIF3A-204ENST00000300862 C11orf57Q6ZUT1 292 aaPredicted RBP15.11■□□□□ 0.01
HIF3A-204ENST00000300862 NKX2-3Q8TAU0 364 aa15.11■□□□□ 0.01
HIF3A-204ENST00000300862 KLF18A0A0U1RQI7 1052 aa15.1■□□□□ 0.01
HIF3A-204ENST00000300862 GPAA1O43292 621 aa15.1■□□□□ 0.01
HIF3A-204ENST00000300862 CSF1RP07333 972 aa15.1■□□□□ 0.01
HIF3A-204ENST00000300862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.1■□□□□ 0.01
HIF3A-204ENST00000300862 SPTLC3Q9NUV7 552 aa15.1■□□□□ 0.01
HIF3A-204ENST00000300862 ZNF335Q9H4Z2 1342 aaPredicted RBP15.1■□□□□ 0.01
HIF3A-204ENST00000300862 GOLGA8BA8MQT2 603 aa15.1■□□□□ 0.01
HIF3A-204ENST00000300862 SNW1Q13573 536 aaKnown RBP15.1■□□□□ 0.01
HIF3A-204ENST00000300862 APPBP2Q92624 585 aa15.1■□□□□ 0.01
HIF3A-204ENST00000300862 SYTL4Q96C24 671 aaPredicted RBP15.1■□□□□ 0.01
HIF3A-204ENST00000300862 CTNNA3Q9UI47 895 aa15.1■□□□□ 0.01
HIF3A-204ENST00000300862 KIF3AQ9Y496 699 aa15.1■□□□□ 0.01
HIF3A-204ENST00000300862 GOLGA6L6A8MZA4 724 aa15.09■□□□□ 0.01
HIF3A-204ENST00000300862 STARD3NLO95772 234 aa15.09■□□□□ 0.01
HIF3A-204ENST00000300862 ZNF75DP51815 510 aa15.09■□□□□ 0.01
HIF3A-204ENST00000300862 ANTXR2P58335 489 aa15.09■□□□□ 0.01
HIF3A-204ENST00000300862 TRIM28Q13263 835 aaKnown RBP15.09■□□□□ 0.01
HIF3A-204ENST00000300862 NLRP10Q86W26 655 aa15.09■□□□□ 0.01
HIF3A-204ENST00000300862 FSIP1Q8NA03 581 aa15.09■□□□□ 0.01
HIF3A-204ENST00000300862 TTLL11Q8NHH1 800 aa15.09■□□□□ 0.01
HIF3A-204ENST00000300862 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
HIF3A-204ENST00000300862 RIPOR2Q9Y4F9 1068 aa15.09■□□□□ 0.01
HIF3A-204ENST00000300862 MAP3K15Q6ZN16 1313 aa15.09■□□□□ 0.01
HIF3A-204ENST00000300862 GIGYF2Q6Y7W6 1299 aaKnown RBP15.09■□□□□ 0.01
HIF3A-204ENST00000300862 CCDC73Q6ZRK6 1079 aa15.09■□□□□ 0.01
HIF3A-204ENST00000300862 HELBQ8NG08 1087 aaPredicted RBP15.09■□□□□ 0.01
HIF3A-204ENST00000300862 TDRD7Q8NHU6 1098 aaKnown RBP15.09■□□□□ 0.01
HIF3A-204ENST00000300862 SLC4A9Q96Q91 983 aa15.09■□□□□ 0.01
HIF3A-204ENST00000300862 ZNF213O14771 459 aa15.08■□□□□ 0
HIF3A-204ENST00000300862 IDH1O75874 414 aaKnown RBP15.08■□□□□ 0
HIF3A-204ENST00000300862 ZFYP08048 801 aaPredicted RBP15.08■□□□□ 0
HIF3A-204ENST00000300862 SLC9C2Q5TAH2 1124 aa15.08■□□□□ 0
HIF3A-204ENST00000300862 MB21D2Q8IYB1 491 aaPredicted RBP15.08■□□□□ 0
HIF3A-204ENST00000300862 ZNF396Q96N95 335 aaPredicted RBP15.08■□□□□ 0
HIF3A-204ENST00000300862 BTG4Q9NY30 223 aa15.08■□□□□ 0
HIF3A-204ENST00000300862 TBC1D2BQ9UPU7 963 aa15.08■□□□□ 0
HIF3A-204ENST00000300862 HPS5Q9UPZ3 1129 aa15.08■□□□□ 0
HIF3A-204ENST00000300862 ZSCAN20P17040 1043 aaPredicted RBP15.08■□□□□ 0
HIF3A-204ENST00000300862 RXRAP19793 462 aa15.08■□□□□ 0
HIF3A-204ENST00000300862 LRRFIP1Q32MZ4 808 aaKnown RBP15.08■□□□□ 0
HIF3A-204ENST00000300862 RALYLQ86SE5 291 aaKnown RBP15.08■□□□□ 0
HIF3A-204ENST00000300862 ORC3Q9UBD5 711 aaPredicted RBP15.08■□□□□ 0
HIF3A-204ENST00000300862 PCDHA7Q9UN72 937 aa15.08■□□□□ 0
HIF3A-204ENST00000300862 CLIC4Q9Y696 253 aa15.08■□□□□ 0
HIF3A-204ENST00000300862 A0A1B0GVL5 298 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 SNAP23O00161 211 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 KINO60870 393 aaKnown RBP15.07■□□□□ 0
HIF3A-204ENST00000300862 APPP05067 770 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 PLA2G4DQ86XP0 818 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 C8orf76Q96K31 380 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 PLA2G12BQ9BX93 195 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 PIH1D3Q9NQM4 214 aaKnown RBP15.07■□□□□ 0
HIF3A-204ENST00000300862 TRMT112Q9UI30 125 aaKnown RBP15.07■□□□□ 0
HIF3A-204ENST00000300862 ZBTB1Q9Y2K1 713 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 XIRP1Q702N8 1843 aaKnown RBP15.07■□□□□ 0
HIF3A-204ENST00000300862 RIC1Q4ADV7 1423 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 IRS4O14654 1257 aaPredicted RBP15.07■□□□□ 0
HIF3A-204ENST00000300862 DMTNQ08495 405 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 ENGASEQ8NFI3 743 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 NCOA7Q8NI08 942 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 SHANK3Q9BYB0 1731 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 NBPF3Q9H094 633 aa15.07■□□□□ 0
HIF3A-204ENST00000300862 ZHX1Q9UKY1 873 aaPredicted RBP15.07■□□□□ 0
HIF3A-204ENST00000300862 TOGARAM1Q9Y4F4 1720 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 A0A0U1RQG5 324 aaPredicted RBP15.06■□□□□ 0
HIF3A-204ENST00000300862 CPLX1O14810 134 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 PHKA1P46020 1223 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 CTSWP56202 376 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 IQCB1Q15051 598 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 AIFM3Q96NN9 605 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 INCENPQ9NQS7 918 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 PAPPAQ13219 1627 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 NWD2Q9ULI1 1742 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 A0A0G2JS52 829 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 ANKRD18BA2A2Z9 1011 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 GOLGA6L19H0YKK7 550 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 EVCP57679 992 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 FAM160A1Q05DH4 1040 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 CCDC144BQ3MJ40 725 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 CCDC144CPQ8IYA2 1237 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 CLIP2Q9UDT6 1046 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 FBXO3Q9UK99 471 aa15.06■□□□□ 0
HIF3A-204ENST00000300862 TPM3P06753 285 aa15.05■□□□□ 0
HIF3A-204ENST00000300862 TICAM2Q86XR7 235 aa15.05■□□□□ 0
HIF3A-204ENST00000300862 TBC1D10CQ8IV04 446 aa15.05■□□□□ 0
HIF3A-204ENST00000300862 TEX13AQ9BXU3 409 aaPredicted RBP15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms