RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 RRP15Q9Y3B9 282 aaKnown RBP15.05■□□□□ -0
TVP23A-201ENST00000299866 MARCKSP29966 332 aaPredicted RBP15.04■□□□□ -0
TVP23A-201ENST00000299866 PSME1Q06323 249 aa15.04■□□□□ -0
TVP23A-201ENST00000299866 KARSQ15046 597 aaKnown RBP15.04■□□□□ -0
TVP23A-201ENST00000299866 LONRF2Q1L5Z9 754 aa15.04■□□□□ -0
TVP23A-201ENST00000299866 MCMDC2Q4G0Z9 681 aa15.04■□□□□ -0
TVP23A-201ENST00000299866 A0A1W2PQ27 194 aa15.04■□□□□ -0
TVP23A-201ENST00000299866 A0A1W2PQ64 194 aa15.04■□□□□ -0
TVP23A-201ENST00000299866 A0A1W2PQD8 194 aa15.04■□□□□ -0
TVP23A-201ENST00000299866 MPRIPQ6WCQ1 1025 aa15.04■□□□□ -0
TVP23A-201ENST00000299866 MPHOSPH8Q99549 860 aa15.04■□□□□ -0
TVP23A-201ENST00000299866 DHX58Q96C10 678 aa15.04■□□□□ -0
TVP23A-201ENST00000299866 CACNA1FO60840 1977 aa15.04■□□□□ -0
TVP23A-201ENST00000299866 MAP3K9P80192 1104 aa15.03■□□□□ -0
TVP23A-201ENST00000299866 SRLQ86TD4 932 aa15.03■□□□□ -0
TVP23A-201ENST00000299866 SIRT1Q96EB6 747 aa15.03■□□□□ -0
TVP23A-201ENST00000299866 GPHNQ9NQX3 736 aaPredicted RBP15.03■□□□□ -0
TVP23A-201ENST00000299866 DBNLQ9UJU6 430 aaKnown RBP15.03■□□□□ -0
TVP23A-201ENST00000299866 CBFA2T2O43439 604 aa15.03■□□□□ -0
TVP23A-201ENST00000299866 DHX16O60231 1041 aaKnown RBP15.03■□□□□ -0
TVP23A-201ENST00000299866 PFKFB1P16118 471 aa15.03■□□□□ -0
TVP23A-201ENST00000299866 PDIA3P30101 505 aaKnown RBP15.03■□□□□ -0
TVP23A-201ENST00000299866 SYNE3Q6ZMZ3 975 aa15.03■□□□□ -0
TVP23A-201ENST00000299866 EXOC4Q96A65 974 aa15.03■□□□□ -0
TVP23A-201ENST00000299866 DESI2Q9BSY9 194 aa15.03■□□□□ -0
TVP23A-201ENST00000299866 HSD3B7Q9H2F3 369 aa15.03■□□□□ -0
TVP23A-201ENST00000299866 ZNF609O15014 1411 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 LEKR1Q6ZMV7 388 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 KCNG4Q8TDN1 519 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 PDE11AQ9HCR9 933 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 CARMIL3Q8ND23 1372 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 NEDD4P46934 1319 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 FDPSP14324 419 aaKnown RBP15.02■□□□□ -0
TVP23A-201ENST00000299866 ACTN2P35609 894 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 TOGARAM2Q6ZUX3 1019 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 GOLGA1Q92805 767 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 C8orf76Q96K31 380 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 EFCC1Q9HA90 598 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 FANCLQ9NW38 375 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 PUF60Q9UHX1 559 aaKnown RBP15.02■□□□□ -0
TVP23A-201ENST00000299866 MRFAP1Q9Y605 127 aa15.02■□□□□ -0
TVP23A-201ENST00000299866 ADKP55263 362 aaKnown RBP15.02□□□□□ -0.01
TVP23A-201ENST00000299866 TFCP2Q12800 502 aa15.02□□□□□ -0.01
TVP23A-201ENST00000299866 VSTM4Q8IW00 320 aa15.02□□□□□ -0.01
TVP23A-201ENST00000299866 CCDC12Q8WUD4 166 aaPredicted RBP15.02□□□□□ -0.01
TVP23A-201ENST00000299866 BAG1Q99933 345 aaPredicted RBP15.02□□□□□ -0.01
TVP23A-201ENST00000299866 JCADQ9P266 1359 aa15.01□□□□□ -0.01
TVP23A-201ENST00000299866 ARHGAP6O43182 974 aa15.01□□□□□ -0.01
TVP23A-201ENST00000299866 HMGB1P09429 215 aaKnown RBP15.01□□□□□ -0.01
TVP23A-201ENST00000299866 MYL5Q02045 173 aa15.01□□□□□ -0.01
TVP23A-201ENST00000299866 RSRC2Q7L4I2 434 aaKnown RBP15.01□□□□□ -0.01
TVP23A-201ENST00000299866 LINS1Q8NG48 757 aa15.01□□□□□ -0.01
TVP23A-201ENST00000299866 RABGGTAQ92696 567 aa15.01□□□□□ -0.01
TVP23A-201ENST00000299866 IRX2Q9BZI1 471 aaPredicted RBP15.01□□□□□ -0.01
TVP23A-201ENST00000299866 NOP2P46087 812 aaKnown RBP15.01□□□□□ -0.01
TVP23A-201ENST00000299866 FOXR1Q6PIV2 292 aa15.01□□□□□ -0.01
TVP23A-201ENST00000299866 DBNDD2Q9BQY9 259 aa15.01□□□□□ -0.01
TVP23A-201ENST00000299866 ANKRD65E5RJM6 399 aa15.01□□□□□ -0.01
TVP23A-201ENST00000299866 IKBKBO14920 756 aa15.01□□□□□ -0.01
TVP23A-201ENST00000299866 HOXB7P09629 217 aa15.01□□□□□ -0.01
TVP23A-201ENST00000299866 PNOCQ13519 176 aa15.01□□□□□ -0.01
TVP23A-201ENST00000299866 EPHA10Q5JZY3 1008 aa15.01□□□□□ -0.01
TVP23A-201ENST00000299866 ATP5JP18859 108 aa15□□□□□ -0.01
TVP23A-201ENST00000299866 NEO1Q92859 1461 aa15□□□□□ -0.01
TVP23A-201ENST00000299866 E7EWF7 191 aa15□□□□□ -0.01
TVP23A-201ENST00000299866 N4BP1O75113 896 aaKnown RBP15□□□□□ -0.01
TVP23A-201ENST00000299866 TXLNAP40222 546 aa15□□□□□ -0.01
TVP23A-201ENST00000299866 GTF2A1P52655 376 aaPredicted RBP15□□□□□ -0.01
TVP23A-201ENST00000299866 EXOSC10Q01780 885 aaKnown RBP15□□□□□ -0.01
TVP23A-201ENST00000299866 MYSM1Q5VVJ2 828 aa15□□□□□ -0.01
TVP23A-201ENST00000299866 WWC2Q6AWC2 1192 aa15□□□□□ -0.01
TVP23A-201ENST00000299866 RIC3Q7Z5B4 369 aa15□□□□□ -0.01
TVP23A-201ENST00000299866 ATG3Q9NT62 314 aa15□□□□□ -0.01
TVP23A-201ENST00000299866 SYKP43405 635 aa14.99□□□□□ -0.01
TVP23A-201ENST00000299866 SALL1Q9NSC2 1324 aa14.99□□□□□ -0.01
TVP23A-201ENST00000299866 PHACTR2O75167 634 aa14.99□□□□□ -0.01
TVP23A-201ENST00000299866 WDHD1O75717 1129 aaPredicted RBP14.99□□□□□ -0.01
TVP23A-201ENST00000299866 TNNI3KQ59H18 835 aa14.99□□□□□ -0.01
TVP23A-201ENST00000299866 OLFM4Q6UX06 510 aa14.99□□□□□ -0.01
TVP23A-201ENST00000299866 TMEM139Q8IV31 216 aa14.99□□□□□ -0.01
TVP23A-201ENST00000299866 SUGCTQ9HAC7 445 aa14.99□□□□□ -0.01
TVP23A-201ENST00000299866 FPGT-TNNI3KV9GXZ4 949 aa14.99□□□□□ -0.01
TVP23A-201ENST00000299866 YEATS4O95619 227 aa14.99□□□□□ -0.01
TVP23A-201ENST00000299866 ZNF530Q6P9A1 599 aaPredicted RBP14.99□□□□□ -0.01
TVP23A-201ENST00000299866 SLC26A8Q96RN1 970 aa14.99□□□□□ -0.01
TVP23A-201ENST00000299866 MROH7-TTC4A0A0A0MT08 1334 aa14.98□□□□□ -0.01
TVP23A-201ENST00000299866 HDGFP51858 240 aaKnown RBP14.98□□□□□ -0.01
TVP23A-201ENST00000299866 SKIDA1Q1XH10 827 aa14.98□□□□□ -0.01
TVP23A-201ENST00000299866 ANO1Q5XXA6 986 aa14.98□□□□□ -0.01
TVP23A-201ENST00000299866 TTLL5Q6EMB2 1281 aa14.98□□□□□ -0.01
TVP23A-201ENST00000299866 FCHSD1Q86WN1 690 aa14.98□□□□□ -0.01
TVP23A-201ENST00000299866 GOLGA6L1Q8N7Z2 621 aa14.98□□□□□ -0.01
TVP23A-201ENST00000299866 LZTFL1Q9NQ48 299 aa14.98□□□□□ -0.01
TVP23A-201ENST00000299866 LRRC37A3O60309 1634 aa14.98□□□□□ -0.01
TVP23A-201ENST00000299866 N4BP2Q86UW6 1770 aaPredicted RBP14.98□□□□□ -0.01
TVP23A-201ENST00000299866 KIF28PB7ZC32 967 aa14.98□□□□□ -0.01
TVP23A-201ENST00000299866 GOLIM4O00461 696 aa14.98□□□□□ -0.01
TVP23A-201ENST00000299866 AXDND1Q5T1B0 1012 aaPredicted RBP14.98□□□□□ -0.01
TVP23A-201ENST00000299866 CHMP4CQ96CF2 233 aa14.98□□□□□ -0.01
TVP23A-201ENST00000299866 POLR3EQ9NVU0 708 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms