RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 TOMM22Q9NS69 142 aa15.92■□□□□ 0.14
CDH8-201ENST00000299345 PDE8AO60658 829 aa15.92■□□□□ 0.14
CDH8-201ENST00000299345 DNAJC25Q9H1X3 360 aa15.92■□□□□ 0.14
CDH8-201ENST00000299345 GPHNQ9NQX3 736 aaPredicted RBP15.92■□□□□ 0.14
CDH8-201ENST00000299345 MRVI1Q9Y6F6 885 aa15.92■□□□□ 0.14
CDH8-201ENST00000299345 UQCRHLA0A096LP55 91 aa15.92■□□□□ 0.14
CDH8-201ENST00000299345 UQCRHP07919 91 aa15.92■□□□□ 0.14
CDH8-201ENST00000299345 FSIP1Q8NA03 581 aa15.91■□□□□ 0.14
CDH8-201ENST00000299345 USP28Q96RU2 1077 aa15.91■□□□□ 0.14
CDH8-201ENST00000299345 CTAGE5O15320 804 aa15.91■□□□□ 0.14
CDH8-201ENST00000299345 POLR3DP05423 398 aaPredicted RBP15.91■□□□□ 0.14
CDH8-201ENST00000299345 UQCRFS1P1P0C7P4 283 aa15.91■□□□□ 0.14
CDH8-201ENST00000299345 NOLC1Q14978 699 aaKnown RBP eCLIP15.91■□□□□ 0.14
CDH8-201ENST00000299345 CBX8Q9HC52 389 aa15.91■□□□□ 0.14
CDH8-201ENST00000299345 ARFGEF2Q9Y6D5 1785 aa15.91■□□□□ 0.14
CDH8-201ENST00000299345 CHAF1AQ13111 956 aaPredicted RBP15.91■□□□□ 0.14
CDH8-201ENST00000299345 ATL3Q6DD88 541 aa15.91■□□□□ 0.14
CDH8-201ENST00000299345 FBXW7Q969H0 707 aa15.91■□□□□ 0.14
CDH8-201ENST00000299345 FTOQ9C0B1 505 aaKnown RBP eCLIP15.91■□□□□ 0.14
CDH8-201ENST00000299345 OTUD7BQ6GQQ9 843 aa15.9■□□□□ 0.14
CDH8-201ENST00000299345 RIPOR2Q9Y4F9 1068 aa15.9■□□□□ 0.14
CDH8-201ENST00000299345 CTDNEP1O95476 244 aa15.9■□□□□ 0.14
CDH8-201ENST00000299345 CYP19A1P11511 503 aaPredicted RBP15.9■□□□□ 0.14
CDH8-201ENST00000299345 FAM13BQ9NYF5 915 aa15.9■□□□□ 0.14
CDH8-201ENST00000299345 CDHR2Q9BYE9 1310 aa15.9■□□□□ 0.14
CDH8-201ENST00000299345 PDE8BO95263 885 aa15.9■□□□□ 0.14
CDH8-201ENST00000299345 MCAMP43121 646 aa15.9■□□□□ 0.14
CDH8-201ENST00000299345 PKD1L3Q7Z443 1732 aa15.9■□□□□ 0.14
CDH8-201ENST00000299345 SLC5A1P13866 664 aa15.89■□□□□ 0.13
CDH8-201ENST00000299345 RCOR1Q9UKL0 485 aa15.89■□□□□ 0.13
CDH8-201ENST00000299345 CAVIN2O95810 425 aa15.89■□□□□ 0.13
CDH8-201ENST00000299345 PIBF1Q8WXW3 757 aa15.89■□□□□ 0.13
CDH8-201ENST00000299345 TERF1P54274 439 aa15.89■□□□□ 0.13
CDH8-201ENST00000299345 MAP3K12Q12852 859 aa15.89■□□□□ 0.13
CDH8-201ENST00000299345 AGXT2Q9BYV1 514 aa15.89■□□□□ 0.13
CDH8-201ENST00000299345 KCPQ6ZWJ8 1503 aa15.88■□□□□ 0.13
CDH8-201ENST00000299345 CARMIL3Q8ND23 1372 aa15.88■□□□□ 0.13
CDH8-201ENST00000299345 TRIM29Q14134 588 aa15.88■□□□□ 0.13
CDH8-201ENST00000299345 CCDC102BQ68D86 513 aa15.88■□□□□ 0.13
CDH8-201ENST00000299345 PHKA1P46020 1223 aa15.88■□□□□ 0.13
CDH8-201ENST00000299345 PUM3Q15397 648 aaKnown RBP15.88■□□□□ 0.13
CDH8-201ENST00000299345 TNS2Q63HR2 1409 aa15.88■□□□□ 0.13
CDH8-201ENST00000299345 ZNF532Q9HCE3 1301 aa15.88■□□□□ 0.13
CDH8-201ENST00000299345 CDKL5O76039 1030 aa15.88■□□□□ 0.13
CDH8-201ENST00000299345 ADAMTS2O95450 1211 aa15.88■□□□□ 0.13
CDH8-201ENST00000299345 ADD2P35612 726 aa15.88■□□□□ 0.13
CDH8-201ENST00000299345 RBM10P98175 930 aaKnown RBP15.88■□□□□ 0.13
CDH8-201ENST00000299345 GLIPR1L2Q4G1C9 344 aa15.88■□□□□ 0.13
CDH8-201ENST00000299345 C17orf53Q8N3J3 647 aaPredicted RBP15.88■□□□□ 0.13
CDH8-201ENST00000299345 NAPBQ9H115 298 aa15.88■□□□□ 0.13
CDH8-201ENST00000299345 RRP9O43818 475 aaKnown RBP15.87■□□□□ 0.13
CDH8-201ENST00000299345 IL6STP40189 918 aaPredicted RBP15.87■□□□□ 0.13
CDH8-201ENST00000299345 LPIN2Q92539 896 aa15.87■□□□□ 0.13
CDH8-201ENST00000299345 METAP2P50579 478 aaKnown RBP eCLIP15.87■□□□□ 0.13
CDH8-201ENST00000299345 STX1AQ16623 288 aa15.87■□□□□ 0.13
CDH8-201ENST00000299345 PARP4Q9UKK3 1724 aaKnown RBP15.87■□□□□ 0.13
CDH8-201ENST00000299345 STRCP1A6NGW2 1772 aa15.87■□□□□ 0.13
CDH8-201ENST00000299345 IGHMBP2P38935 993 aaKnown RBP15.86■□□□□ 0.13
CDH8-201ENST00000299345 FAM160A1Q05DH4 1040 aa15.86■□□□□ 0.13
CDH8-201ENST00000299345 RRP12Q5JTH9 1297 aaKnown RBP15.86■□□□□ 0.13
CDH8-201ENST00000299345 MRPS27Q92552 414 aaKnown RBP15.86■□□□□ 0.13
CDH8-201ENST00000299345 ACSBG1Q96GR2 724 aa15.86■□□□□ 0.13
CDH8-201ENST00000299345 ATP6V1AP38606 617 aa15.86■□□□□ 0.13
CDH8-201ENST00000299345 MICU3Q86XE3 530 aa15.86■□□□□ 0.13
CDH8-201ENST00000299345 NAT10Q9H0A0 1025 aaKnown RBP15.86■□□□□ 0.13
CDH8-201ENST00000299345 ANO10Q9NW15 660 aa15.86■□□□□ 0.13
CDH8-201ENST00000299345 ANGEL1Q9UNK9 670 aaKnown RBP15.86■□□□□ 0.13
CDH8-201ENST00000299345 ERVV-1B6SEH8 477 aa15.86■□□□□ 0.13
CDH8-201ENST00000299345 PDE6AP16499 860 aa15.86■□□□□ 0.13
CDH8-201ENST00000299345 PIH1D3Q9NQM4 214 aaKnown RBP15.86■□□□□ 0.13
CDH8-201ENST00000299345 ABCC12Q96J65 1359 aa15.86■□□□□ 0.13
CDH8-201ENST00000299345 UBE3CQ15386 1083 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 CCDC186Q7Z3E2 898 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 CCDC144CPQ8IYA2 1237 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 MB21D2Q8IYB1 491 aaPredicted RBP15.85■□□□□ 0.13
CDH8-201ENST00000299345 CEP57L1Q8IYX8 460 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 UTP14AQ9BVJ6 771 aaKnown RBP15.85■□□□□ 0.13
CDH8-201ENST00000299345 RXRAP19793 462 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 DDB1Q16531 1140 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 KCNG4Q8TDN1 519 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 NACAP1Q9BZK3 213 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 B4E1Z4 1266 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 PTGS1P23219 599 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 GTF2E1P29083 439 aaPredicted RBP15.85■□□□□ 0.13
CDH8-201ENST00000299345 TDO2P48775 406 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 FBXO18Q8NFZ0 1043 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 MROH5Q6ZUA9 1318 aa15.85■□□□□ 0.13
CDH8-201ENST00000299345 TMEM67Q5HYA8 995 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 MAGEB6Q8N7X4 407 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 LRP2BPQ9P2M1 347 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 BRAPQ7Z569 592 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 STK11IPQ8N1F8 1099 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 ALG1Q9BT22 464 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 CLIP2Q9UDT6 1046 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 LAMB4A4D0S4 1761 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 A0A1B0GVL5 298 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 CCDC69A6NI79 296 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 SPTLC2O15270 562 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 AP5Z1O43299 807 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 CCDC152Q4G0S7 254 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms