RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 TRDNQ13061 729 aa17.13■□□□□ 0.33
GDF9-201ENST00000296875 RALYLQ86SE5 291 aaKnown RBP17.13■□□□□ 0.33
GDF9-201ENST00000296875 TCEANC2Q96MN5 208 aa17.13■□□□□ 0.33
GDF9-201ENST00000296875 ZNF396Q96N95 335 aaPredicted RBP17.13■□□□□ 0.33
GDF9-201ENST00000296875 SRCAPQ6ZRS2 3230 aa17.13■□□□□ 0.33
GDF9-201ENST00000296875 CAVIN2O95810 425 aa17.12■□□□□ 0.33
GDF9-201ENST00000296875 PTMAP06454 111 aaKnown RBP17.12■□□□□ 0.33
GDF9-201ENST00000296875 PUM3Q15397 648 aaKnown RBP17.12■□□□□ 0.33
GDF9-201ENST00000296875 LINC00116Q8NCU8 138 aa17.12■□□□□ 0.33
GDF9-201ENST00000296875 NUP98P52948 1817 aa17.12■□□□□ 0.33
GDF9-201ENST00000296875 RIC1Q4ADV7 1423 aa17.12■□□□□ 0.33
GDF9-201ENST00000296875 TRIM37O94972 964 aa17.12■□□□□ 0.33
GDF9-201ENST00000296875 PDE8BO95263 885 aa17.12■□□□□ 0.33
GDF9-201ENST00000296875 EVCP57679 992 aa17.12■□□□□ 0.33
GDF9-201ENST00000296875 UBE3CQ15386 1083 aa17.12■□□□□ 0.33
GDF9-201ENST00000296875 NCOA7Q8NI08 942 aa17.12■□□□□ 0.33
GDF9-201ENST00000296875 LPIN2Q92539 896 aa17.12■□□□□ 0.33
GDF9-201ENST00000296875 NUP62CLQ9H1M0 184 aa17.12■□□□□ 0.33
GDF9-201ENST00000296875 CCDC87Q9NVE4 849 aa17.12■□□□□ 0.33
GDF9-201ENST00000296875 TCHHQ07283 1943 aa17.11■□□□□ 0.33
GDF9-201ENST00000296875 TNS1Q9HBL0 1735 aaKnown RBP17.11■□□□□ 0.33
GDF9-201ENST00000296875 ZNF213O14771 459 aa17.11■□□□□ 0.33
GDF9-201ENST00000296875 TPM3P06753 285 aa17.11■□□□□ 0.33
GDF9-201ENST00000296875 SLC5A1P13866 664 aa17.11■□□□□ 0.33
GDF9-201ENST00000296875 GPTP24298 496 aa17.11■□□□□ 0.33
GDF9-201ENST00000296875 EIF5P55010 431 aaKnown RBP17.11■□□□□ 0.33
GDF9-201ENST00000296875 MAP3K11Q16584 847 aa17.11■□□□□ 0.33
GDF9-201ENST00000296875 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
GDF9-201ENST00000296875 ZNF34Q8IZ26 560 aa17.11■□□□□ 0.33
GDF9-201ENST00000296875 ZNF652Q9Y2D9 606 aa17.11■□□□□ 0.33
GDF9-201ENST00000296875 TAF6LQ9Y6J9 622 aa17.11■□□□□ 0.33
GDF9-201ENST00000296875 M0R2C6 588 aa17.1■□□□□ 0.33
GDF9-201ENST00000296875 SCRN1Q12765 414 aa17.1■□□□□ 0.33
GDF9-201ENST00000296875 HLFQ16534 295 aa17.1■□□□□ 0.33
GDF9-201ENST00000296875 RNF214Q8ND24 703 aa17.1■□□□□ 0.33
GDF9-201ENST00000296875 OSBP2Q969R2 916 aa17.1■□□□□ 0.33
GDF9-201ENST00000296875 GREM2Q9H772 168 aa17.1■□□□□ 0.33
GDF9-201ENST00000296875 ARID4AP29374 1257 aaPredicted RBP17.1■□□□□ 0.33
GDF9-201ENST00000296875 ADORA1P30542 326 aa17.1■□□□□ 0.33
GDF9-201ENST00000296875 ZAP70P43403 619 aa17.1■□□□□ 0.33
GDF9-201ENST00000296875 STOX1Q6ZVD7 989 aa17.1■□□□□ 0.33
GDF9-201ENST00000296875 RTL9Q8NET4 1388 aa17.09■□□□□ 0.33
GDF9-201ENST00000296875 PTPDC1A2A3K4 754 aa17.09■□□□□ 0.33
GDF9-201ENST00000296875 CTAGE5O15320 804 aa17.09■□□□□ 0.33
GDF9-201ENST00000296875 RESTQ13127 1097 aa17.09■□□□□ 0.33
GDF9-201ENST00000296875 TTC6Q86TZ1 520 aa17.09■□□□□ 0.33
GDF9-201ENST00000296875 FERMT3Q86UX7 667 aa17.09■□□□□ 0.33
GDF9-201ENST00000296875 NSUN7Q8NE18 718 aaKnown RBP17.09■□□□□ 0.33
GDF9-201ENST00000296875 LEO1Q8WVC0 666 aaPredicted RBP17.09■□□□□ 0.33
GDF9-201ENST00000296875 UTP14AQ9BVJ6 771 aaKnown RBP17.09■□□□□ 0.33
GDF9-201ENST00000296875 LRRC4BQ9NT99 713 aa17.09■□□□□ 0.33
GDF9-201ENST00000296875 ZKSCAN5Q9Y2L8 839 aa17.09■□□□□ 0.33
GDF9-201ENST00000296875 LRP5O75197 1615 aa17.09■□□□□ 0.33
GDF9-201ENST00000296875 ZMYM6O95789 1325 aa17.09■□□□□ 0.33
GDF9-201ENST00000296875 CNTNAP4Q9C0A0 1308 aa17.09■□□□□ 0.33
GDF9-201ENST00000296875 C4BP0C0L5 1744 aa17.09■□□□□ 0.33
GDF9-201ENST00000296875 MYH7P12883 1935 aa17.08■□□□□ 0.33
GDF9-201ENST00000296875 RGL2O15211 777 aa17.08■□□□□ 0.33
GDF9-201ENST00000296875 ZNF500O60304 480 aaPredicted RBP17.08■□□□□ 0.33
GDF9-201ENST00000296875 ADD2P35612 726 aa17.08■□□□□ 0.33
GDF9-201ENST00000296875 CCDC152Q4G0S7 254 aa17.08■□□□□ 0.33
GDF9-201ENST00000296875 RC3H1Q5TC82 1133 aaKnown RBP17.08■□□□□ 0.33
GDF9-201ENST00000296875 CPLX2Q6PUV4 134 aaKnown RBP17.08■□□□□ 0.33
GDF9-201ENST00000296875 MPHOSPH8Q99549 860 aa17.08■□□□□ 0.33
GDF9-201ENST00000296875 TNMDQ9H2S6 317 aa17.08■□□□□ 0.33
GDF9-201ENST00000296875 CCNL1Q9UK58 526 aaPredicted RBP17.08■□□□□ 0.33
GDF9-201ENST00000296875 LAMA4Q16363 1823 aa17.08■□□□□ 0.32
GDF9-201ENST00000296875 GOLGA6L6A8MZA4 724 aa17.07■□□□□ 0.32
GDF9-201ENST00000296875 GPAA1O43292 621 aa17.07■□□□□ 0.32
GDF9-201ENST00000296875 CDKL5O76039 1030 aa17.07■□□□□ 0.32
GDF9-201ENST00000296875 PDIA3P30101 505 aaKnown RBP17.07■□□□□ 0.32
GDF9-201ENST00000296875 APOBRQ0VD83 1088 aa17.07■□□□□ 0.32
GDF9-201ENST00000296875 CCDC125Q86Z20 511 aa17.07■□□□□ 0.32
GDF9-201ENST00000296875 VGLL2Q8N8G2 317 aa17.07■□□□□ 0.32
GDF9-201ENST00000296875 BICD2Q8TD16 824 aa17.07■□□□□ 0.32
GDF9-201ENST00000296875 NAP1L2Q9ULW6 460 aaPredicted RBP17.07■□□□□ 0.32
GDF9-201ENST00000296875 BCORQ6W2J9 1755 aa17.07■□□□□ 0.32
GDF9-201ENST00000296875 ARAP2Q8WZ64 1704 aa17.07■□□□□ 0.32
GDF9-201ENST00000296875 JAK2O60674 1132 aa17.07■□□□□ 0.32
GDF9-201ENST00000296875 IGHMBP2P38935 993 aaKnown RBP17.07■□□□□ 0.32
GDF9-201ENST00000296875 MAP3K12Q12852 859 aa17.07■□□□□ 0.32
GDF9-201ENST00000296875 PROM2Q8N271 834 aa17.07■□□□□ 0.32
GDF9-201ENST00000296875 CCDC85AQ96PX6 553 aaPredicted RBP17.07■□□□□ 0.32
GDF9-201ENST00000296875 CPLX1O14810 134 aa17.06■□□□□ 0.32
GDF9-201ENST00000296875 FGAP02671 866 aa17.06■□□□□ 0.32
GDF9-201ENST00000296875 GNAT2P19087 354 aa17.06■□□□□ 0.32
GDF9-201ENST00000296875 SLC9C2Q5TAH2 1124 aa17.06■□□□□ 0.32
GDF9-201ENST00000296875 UBR3Q6ZT12 1888 aa17.06■□□□□ 0.32
GDF9-201ENST00000296875 RGPD3A6NKT7 1758 aaPredicted RBP17.05■□□□□ 0.32
GDF9-201ENST00000296875 RGPD4Q7Z3J3 1758 aa17.05■□□□□ 0.32
GDF9-201ENST00000296875 PRC1O43663 620 aa17.05■□□□□ 0.32
GDF9-201ENST00000296875 KDM4AO75164 1064 aa17.05■□□□□ 0.32
GDF9-201ENST00000296875 MCAMP43121 646 aa17.05■□□□□ 0.32
GDF9-201ENST00000296875 DDX11Q96FC9 970 aa17.05■□□□□ 0.32
GDF9-201ENST00000296875 NAP1L5Q96NT1 182 aaPredicted RBP17.05■□□□□ 0.32
GDF9-201ENST00000296875 CDC5LQ99459 802 aaKnown RBP17.05■□□□□ 0.32
GDF9-201ENST00000296875 FUCA2Q9BTY2 467 aa17.05■□□□□ 0.32
GDF9-201ENST00000296875 SALL1Q9NSC2 1324 aa17.05■□□□□ 0.32
GDF9-201ENST00000296875 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
GDF9-201ENST00000296875 TERF1P54274 439 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms