RNA–Protein interactions for RNA: ENST00000296145.5

TDGF1-201, Transcript of teratocarcinoma-derived growth factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TDGF1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDGF1-201ENST00000296145 PROSER3Q2NL68 480 aa10.96□□□□□ -0.65
TDGF1-201ENST00000296145 CLASRPQ8N2M8 674 aaKnown RBP10.96□□□□□ -0.65
TDGF1-201ENST00000296145 COL4A3BPQ9Y5P4 624 aa10.96□□□□□ -0.65
TDGF1-201ENST00000296145 WDR33Q9C0J8 1336 aaKnown RBP10.96□□□□□ -0.65
TDGF1-201ENST00000296145 OVOS2A0A0G2JMS6 1433 aa10.96□□□□□ -0.65
TDGF1-201ENST00000296145 C1orf141Q5JVX7 400 aa10.96□□□□□ -0.66
TDGF1-201ENST00000296145 CLP1Q92989 425 aaKnown RBP10.96□□□□□ -0.66
TDGF1-201ENST00000296145 C9orf78Q9NZ63 289 aaPredicted RBP10.96□□□□□ -0.66
TDGF1-201ENST00000296145 SPG7Q9UQ90 795 aa10.96□□□□□ -0.66
TDGF1-201ENST00000296145 PRAMEF22A3QJZ6 481 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 CD46P15529 392 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 AK2P54819 239 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 NR6A1Q15406 480 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 EAPPQ56P03 285 aaPredicted RBP10.95□□□□□ -0.66
TDGF1-201ENST00000296145 GLYCTKQ8IVS8 523 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 SMAP1Q8IYB5 467 aaPredicted RBP10.95□□□□□ -0.66
TDGF1-201ENST00000296145 CREB3O43889 395 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 ARHGAP4P98171 946 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 CWF19L2Q2TBE0 894 aaKnown RBP10.95□□□□□ -0.66
TDGF1-201ENST00000296145 KIAA1211Q6ZU35 1233 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 RUFY3Q7L099 469 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 ORAI2Q96SN7 254 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 ECHDC1Q9NTX5 307 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 SEPT3Q9UH03 358 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 MKRN1Q9UHC7 482 aaKnown RBP10.95□□□□□ -0.66
TDGF1-201ENST00000296145 PCDHGC3Q9UN70 934 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 PCDHGB7Q9Y5F8 929 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 RPAP1Q9BWH6 1393 aaPredicted RBP10.95□□□□□ -0.66
TDGF1-201ENST00000296145 SLIT3O75094 1523 aa10.95□□□□□ -0.66
TDGF1-201ENST00000296145 PITPNM1O00562 1244 aa10.94□□□□□ -0.66
TDGF1-201ENST00000296145 GADD45BO75293 160 aaPredicted RBP10.94□□□□□ -0.66
TDGF1-201ENST00000296145 USP48Q86UV5 1035 aa10.94□□□□□ -0.66
TDGF1-201ENST00000296145 TMTC2Q8N394 836 aa10.94□□□□□ -0.66
TDGF1-201ENST00000296145 ANKRD24Q8TF21 1146 aa10.94□□□□□ -0.66
TDGF1-201ENST00000296145 LIMCH1Q9UPQ0 1083 aa10.94□□□□□ -0.66
TDGF1-201ENST00000296145 PA2G4Q9UQ80 394 aaKnown RBP10.94□□□□□ -0.66
TDGF1-201ENST00000296145 SIPA1L3O60292 1781 aaPredicted RBP10.94□□□□□ -0.66
TDGF1-201ENST00000296145 RASA1P20936 1047 aa10.94□□□□□ -0.66
TDGF1-201ENST00000296145 ERC1Q8IUD2 1116 aa10.94□□□□□ -0.66
TDGF1-201ENST00000296145 KAZALD1Q96I82 304 aa10.94□□□□□ -0.66
TDGF1-201ENST00000296145 SETDB2Q96T68 719 aa10.94□□□□□ -0.66
TDGF1-201ENST00000296145 DIAPH3Q9NSV4 1193 aa10.94□□□□□ -0.66
TDGF1-201ENST00000296145 HYPKQ9NX55 129 aa10.94□□□□□ -0.66
TDGF1-201ENST00000296145 AXIN2Q9Y2T1 843 aa10.94□□□□□ -0.66
TDGF1-201ENST00000296145 UTYO14607 1347 aa10.93□□□□□ -0.66
TDGF1-201ENST00000296145 SKIP12755 728 aa10.93□□□□□ -0.66
TDGF1-201ENST00000296145 XPCQ01831 940 aaPredicted RBP10.93□□□□□ -0.66
TDGF1-201ENST00000296145 PTH1RQ03431 593 aa10.93□□□□□ -0.66
TDGF1-201ENST00000296145 LINS1Q8NG48 757 aa10.93□□□□□ -0.66
TDGF1-201ENST00000296145 RUFY2Q8WXA3 655 aa10.93□□□□□ -0.66
TDGF1-201ENST00000296145 PRIMPOLQ96LW4 560 aa10.93□□□□□ -0.66
TDGF1-201ENST00000296145 NOL7Q9UMY1 257 aaKnown RBP10.93□□□□□ -0.66
TDGF1-201ENST00000296145 CAMTA1Q9Y6Y1 1673 aa10.93□□□□□ -0.66
TDGF1-201ENST00000296145 FAM196BA6NMK8 535 aa10.93□□□□□ -0.66
TDGF1-201ENST00000296145 OATP04181 439 aa10.93□□□□□ -0.66
TDGF1-201ENST00000296145 MSNP26038 577 aaKnown RBP10.93□□□□□ -0.66
TDGF1-201ENST00000296145 PLEKHG6Q3KR16 790 aa10.93□□□□□ -0.66
TDGF1-201ENST00000296145 MKNK1Q9BUB5 465 aa10.93□□□□□ -0.66
TDGF1-201ENST00000296145 IRF2BPLQ9H1B7 796 aa10.93□□□□□ -0.66
TDGF1-201ENST00000296145 GRM8O00222 908 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 IFIT2P09913 472 aaKnown RBP10.92□□□□□ -0.66
TDGF1-201ENST00000296145 ZSCAN22P10073 491 aaPredicted RBP10.92□□□□□ -0.66
TDGF1-201ENST00000296145 CPA1P15085 419 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 CASTP20810 708 aaKnown RBP10.92□□□□□ -0.66
TDGF1-201ENST00000296145 SYT1P21579 422 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 NCOA4Q13772 614 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 TUSC1Q2TAM9 212 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 FILIP1Q7Z7B0 1213 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 SYAP1Q96A49 352 aaPredicted RBP10.92□□□□□ -0.66
TDGF1-201ENST00000296145 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.92□□□□□ -0.66
TDGF1-201ENST00000296145 PNMA2Q9UL42 364 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.92□□□□□ -0.66
TDGF1-201ENST00000296145 ZNF142P52746 1687 aaPredicted RBP10.92□□□□□ -0.66
TDGF1-201ENST00000296145 ADAMTS7Q9UKP4 1686 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 STX6O43752 255 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 SASH1O94885 1247 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 ADCK5Q3MIX3 580 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 HELBQ8NG08 1087 aaPredicted RBP10.92□□□□□ -0.66
TDGF1-201ENST00000296145 SUCLG2Q96I99 432 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 TM6SF1Q9BZW5 370 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 CCSER2Q9H7U1 834 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 PCDH12Q9NPG4 1184 aa10.92□□□□□ -0.66
TDGF1-201ENST00000296145 DDX21Q9NR30 783 aaKnown RBP eCLIP10.92□□□□□ -0.66
TDGF1-201ENST00000296145 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.92□□□□□ -0.66
TDGF1-201ENST00000296145 LMTK3Q96Q04 1460 aa10.91□□□□□ -0.66
TDGF1-201ENST00000296145 VPS53Q5VIR6 699 aa10.91□□□□□ -0.66
TDGF1-201ENST00000296145 ZNF746Q6NUN9 644 aaPredicted RBP10.91□□□□□ -0.66
TDGF1-201ENST00000296145 AACSQ86V21 672 aa10.91□□□□□ -0.66
TDGF1-201ENST00000296145 BICC1Q9H694 974 aaKnown RBP10.91□□□□□ -0.66
TDGF1-201ENST00000296145 OFD1O75665 1012 aa10.91□□□□□ -0.66
TDGF1-201ENST00000296145 LARGE1O95461 756 aa10.91□□□□□ -0.66
TDGF1-201ENST00000296145 NECTIN1Q15223 517 aa10.91□□□□□ -0.66
TDGF1-201ENST00000296145 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
TDGF1-201ENST00000296145 UTP14CQ5TAP6 766 aaKnown RBP10.91□□□□□ -0.66
TDGF1-201ENST00000296145 PRPF40BQ6NWY9 871 aaKnown RBP10.91□□□□□ -0.66
TDGF1-201ENST00000296145 RNF214Q8ND24 703 aa10.91□□□□□ -0.66
TDGF1-201ENST00000296145 FAM200AQ8TCP9 573 aa10.91□□□□□ -0.66
TDGF1-201ENST00000296145 EAF2Q96CJ1 260 aaPredicted RBP10.91□□□□□ -0.66
TDGF1-201ENST00000296145 TSPY26PQ9H489 355 aa10.91□□□□□ -0.66
TDGF1-201ENST00000296145 ZSWIM6Q9HCJ5 1215 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms