RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 SPATA5Q8NB90 893 aa18.46■□□□□ 0.55
CCDC140-201ENST00000295226 HAUS7Q99871 368 aa18.46■□□□□ 0.55
CCDC140-201ENST00000295226 COA1Q9GZY4 146 aa18.46■□□□□ 0.55
CCDC140-201ENST00000295226 AKAP11Q9UKA4 1901 aa18.46■□□□□ 0.55
CCDC140-201ENST00000295226 COL1A1P02452 1464 aaPredicted RBP18.46■□□□□ 0.55
CCDC140-201ENST00000295226 ECE2O60344 883 aa18.45■□□□□ 0.54
CCDC140-201ENST00000295226 IL1R1P14778 569 aa18.45■□□□□ 0.54
CCDC140-201ENST00000295226 ZNF512BQ96KM6 892 aaPredicted RBP18.45■□□□□ 0.54
CCDC140-201ENST00000295226 AOX1Q06278 1338 aa18.45■□□□□ 0.54
CCDC140-201ENST00000295226 CCDC88AQ3V6T2 1871 aa18.45■□□□□ 0.54
CCDC140-201ENST00000295226 YDJCA8MPS7 323 aa18.44■□□□□ 0.54
CCDC140-201ENST00000295226 TRIM6-TRIM34B2RNG4 842 aa18.44■□□□□ 0.54
CCDC140-201ENST00000295226 GOLIM4O00461 696 aa18.44■□□□□ 0.54
CCDC140-201ENST00000295226 FBXW7Q969H0 707 aa18.44■□□□□ 0.54
CCDC140-201ENST00000295226 RILPL2Q969X0 211 aa18.44■□□□□ 0.54
CCDC140-201ENST00000295226 LTBP3Q9NS15 1303 aa18.44■□□□□ 0.54
CCDC140-201ENST00000295226 CYP2E1P05181 493 aaPredicted RBP18.44■□□□□ 0.54
CCDC140-201ENST00000295226 GTF2IP78347 998 aa18.44■□□□□ 0.54
CCDC140-201ENST00000295226 MXD3Q9BW11 206 aa18.44■□□□□ 0.54
CCDC140-201ENST00000295226 SDSP20132 328 aa18.43■□□□□ 0.54
CCDC140-201ENST00000295226 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.43■□□□□ 0.54
CCDC140-201ENST00000295226 PAG1Q9NWQ8 432 aa18.43■□□□□ 0.54
CCDC140-201ENST00000295226 DENND2AQ9ULE3 1009 aa18.43■□□□□ 0.54
CCDC140-201ENST00000295226 SCN9AQ15858 1988 aa18.42■□□□□ 0.54
CCDC140-201ENST00000295226 NIM1KQ8IY84 436 aa18.42■□□□□ 0.54
CCDC140-201ENST00000295226 PIH1D3Q9NQM4 214 aaKnown RBP18.42■□□□□ 0.54
CCDC140-201ENST00000295226 RAD17O75943 681 aa18.41■□□□□ 0.54
CCDC140-201ENST00000295226 CHGBP05060 677 aa18.41■□□□□ 0.54
CCDC140-201ENST00000295226 PODNQ7Z5L7 613 aa18.41■□□□□ 0.54
CCDC140-201ENST00000295226 VPS33BQ9H267 617 aa18.41■□□□□ 0.54
CCDC140-201ENST00000295226 MYH13Q9UKX3 1938 aa18.41■□□□□ 0.54
CCDC140-201ENST00000295226 MYO5AQ9Y4I1 1855 aaKnown RBP18.41■□□□□ 0.54
CCDC140-201ENST00000295226 GRIK5Q16478 980 aa18.41■□□□□ 0.54
CCDC140-201ENST00000295226 TTLL5Q6EMB2 1281 aa18.41■□□□□ 0.54
CCDC140-201ENST00000295226 ABCF2Q9UG63 623 aa18.41■□□□□ 0.54
CCDC140-201ENST00000295226 SBF1O95248 1867 aa18.4■□□□□ 0.54
CCDC140-201ENST00000295226 SEMA3EO15041 775 aa18.4■□□□□ 0.54
CCDC140-201ENST00000295226 LMNB1P20700 586 aa18.4■□□□□ 0.54
CCDC140-201ENST00000295226 SLFNL1Q499Z3 407 aa18.4■□□□□ 0.54
CCDC140-201ENST00000295226 BMP2KLQ5H9B9 411 aa18.4■□□□□ 0.54
CCDC140-201ENST00000295226 JDP2Q8WYK2 163 aa18.4■□□□□ 0.54
CCDC140-201ENST00000295226 ZNRF3Q9ULT6 936 aa18.4■□□□□ 0.54
CCDC140-201ENST00000295226 GRIN3BO60391 1043 aa18.38■□□□□ 0.53
CCDC140-201ENST00000295226 CNTROBQ8N137 903 aa18.38■□□□□ 0.53
CCDC140-201ENST00000295226 EVI5LQ96CN4 794 aa18.38■□□□□ 0.53
CCDC140-201ENST00000295226 RNF181Q9P0P0 153 aa18.38■□□□□ 0.53
CCDC140-201ENST00000295226 FAM205AQ6ZU69 1335 aa18.38■□□□□ 0.53
CCDC140-201ENST00000295226 IDH1O75874 414 aaKnown RBP18.38■□□□□ 0.53
CCDC140-201ENST00000295226 MFSD14BQ5SR56 506 aa18.38■□□□□ 0.53
CCDC140-201ENST00000295226 C9orf131Q5VYM1 1079 aa18.38■□□□□ 0.53
CCDC140-201ENST00000295226 CERS5Q8N5B7 392 aa18.38■□□□□ 0.53
CCDC140-201ENST00000295226 FSD1Q9BTV5 496 aa18.38■□□□□ 0.53
CCDC140-201ENST00000295226 USP17L3A6NCW0 530 aa18.37■□□□□ 0.53
CCDC140-201ENST00000295226 USP17L4A6NCW7 530 aa18.37■□□□□ 0.53
CCDC140-201ENST00000295226 PSMD14O00487 310 aa18.37■□□□□ 0.53
CCDC140-201ENST00000295226 PRDX5P30044 214 aa18.37■□□□□ 0.53
CCDC140-201ENST00000295226 CXCL9Q07325 125 aa18.37■□□□□ 0.53
CCDC140-201ENST00000295226 USP17L1Q7RTZ2 530 aa18.37■□□□□ 0.53
CCDC140-201ENST00000295226 WDR66Q8TBY9 1149 aa18.37■□□□□ 0.53
CCDC140-201ENST00000295226 LRP2BPQ9P2M1 347 aa18.37■□□□□ 0.53
CCDC140-201ENST00000295226 DACT2Q5SW24 774 aa18.36■□□□□ 0.53
CCDC140-201ENST00000295226 KBTBD3Q8NAB2 608 aa18.36■□□□□ 0.53
CCDC140-201ENST00000295226 F8W031 263 aaPredicted RBP18.35■□□□□ 0.53
CCDC140-201ENST00000295226 TTF1Q15361 905 aaPredicted RBP18.35■□□□□ 0.53
CCDC140-201ENST00000295226 STRIP1Q5VSL9 837 aa18.35■□□□□ 0.53
CCDC140-201ENST00000295226 RAI14Q9P0K7 980 aa18.35■□□□□ 0.53
CCDC140-201ENST00000295226 ZBTB12Q9Y330 459 aaPredicted RBP18.35■□□□□ 0.53
CCDC140-201ENST00000295226 AK9Q5TCS8 1911 aa18.35■□□□□ 0.53
CCDC140-201ENST00000295226 PDS5AQ29RF7 1337 aaKnown RBP18.35■□□□□ 0.53
CCDC140-201ENST00000295226 ZNF541Q9H0D2 1346 aa18.35■□□□□ 0.53
CCDC140-201ENST00000295226 FZD9O00144 591 aa18.34■□□□□ 0.53
CCDC140-201ENST00000295226 ZBTB22O15209 634 aa18.34■□□□□ 0.53
CCDC140-201ENST00000295226 ERICH6Q7L0X2 663 aa18.34■□□□□ 0.53
CCDC140-201ENST00000295226 ZNF384Q8TF68 577 aa18.34■□□□□ 0.53
CCDC140-201ENST00000295226 DICER1Q9UPY3 1922 aaKnown RBP18.33■□□□□ 0.53
CCDC140-201ENST00000295226 LDHBP07195 334 aaKnown RBP18.33■□□□□ 0.52
CCDC140-201ENST00000295226 VIL1P09327 827 aaKnown RBP18.33■□□□□ 0.52
CCDC140-201ENST00000295226 SLC9C2Q5TAH2 1124 aa18.33■□□□□ 0.52
CCDC140-201ENST00000295226 CIAPIN1Q6FI81 312 aa18.33■□□□□ 0.52
CCDC140-201ENST00000295226 MAGEB6Q8N7X4 407 aa18.33■□□□□ 0.52
CCDC140-201ENST00000295226 GJA3Q9Y6H8 435 aa18.33■□□□□ 0.52
CCDC140-201ENST00000295226 SALL1Q9NSC2 1324 aa18.33■□□□□ 0.52
CCDC140-201ENST00000295226 ZNF646O15015 1829 aaPredicted RBP18.33■□□□□ 0.52
CCDC140-201ENST00000295226 EIF6P56537 245 aaKnown RBP18.32■□□□□ 0.52
CCDC140-201ENST00000295226 MECOMQ03112 1051 aa18.32■□□□□ 0.52
CCDC140-201ENST00000295226 MAP3K12Q12852 859 aa18.32■□□□□ 0.52
CCDC140-201ENST00000295226 KIAA0825Q8IV33 1275 aa18.32■□□□□ 0.52
CCDC140-201ENST00000295226 TBC1D22AQ8WUA7 517 aa18.32■□□□□ 0.52
CCDC140-201ENST00000295226 PDE6AP16499 860 aa18.31■□□□□ 0.52
CCDC140-201ENST00000295226 CHMLP26374 656 aa18.31■□□□□ 0.52
CCDC140-201ENST00000295226 SCNN1DP51172 638 aa18.31■□□□□ 0.52
CCDC140-201ENST00000295226 RSBN1LQ6PCB5 846 aaPredicted RBP18.31■□□□□ 0.52
CCDC140-201ENST00000295226 FAM227BQ96M60 508 aa18.31■□□□□ 0.52
CCDC140-201ENST00000295226 RNF113AO15541 343 aaKnown RBP18.31■□□□□ 0.52
CCDC140-201ENST00000295226 DIXDC1Q155Q3 683 aa18.31■□□□□ 0.52
CCDC140-201ENST00000295226 SPTY2D1Q68D10 685 aaPredicted RBP18.31■□□□□ 0.52
CCDC140-201ENST00000295226 DZIP1Q86YF9 867 aaKnown RBP18.31■□□□□ 0.52
CCDC140-201ENST00000295226 ZGPATQ8N5A5 531 aaKnown RBP18.31■□□□□ 0.52
CCDC140-201ENST00000295226 NSUN4Q96CB9 384 aaKnown RBP18.31■□□□□ 0.52
CCDC140-201ENST00000295226 SEC62Q99442 399 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms