RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 ME3Q16798 604 aa16.72■□□□□ 0.27
ABCF3-201ENST00000292808 WASHC4Q2M389 1173 aa16.72■□□□□ 0.27
ABCF3-201ENST00000292808 CCDC83Q8IWF9 413 aa16.72■□□□□ 0.27
ABCF3-201ENST00000292808 SPATA5Q8NB90 893 aa16.72■□□□□ 0.27
ABCF3-201ENST00000292808 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.71■□□□□ 0.27
ABCF3-201ENST00000292808 KRT32Q14532 448 aa16.71■□□□□ 0.27
ABCF3-201ENST00000292808 LRRFIP1Q32MZ4 808 aaKnown RBP16.71■□□□□ 0.27
ABCF3-201ENST00000292808 TTLL5Q6EMB2 1281 aa16.71■□□□□ 0.27
ABCF3-201ENST00000292808 WWC3Q9ULE0 1092 aa16.71■□□□□ 0.27
ABCF3-201ENST00000292808 TCRBV5S4A2TA0A5A2 114 aa16.71■□□□□ 0.26
ABCF3-201ENST00000292808 TM4SF1P30408 202 aa16.71■□□□□ 0.26
ABCF3-201ENST00000292808 TTF1Q15361 905 aaPredicted RBP16.71■□□□□ 0.26
ABCF3-201ENST00000292808 CAVIN1Q6NZI2 390 aaKnown RBP16.71■□□□□ 0.26
ABCF3-201ENST00000292808 TPTE2Q6XPS3 522 aa16.71■□□□□ 0.26
ABCF3-201ENST00000292808 PROM2Q8N271 834 aa16.71■□□□□ 0.26
ABCF3-201ENST00000292808 NEK1Q96PY6 1258 aa16.71■□□□□ 0.26
ABCF3-201ENST00000292808 MINPP1Q9UNW1 487 aa16.71■□□□□ 0.26
ABCF3-201ENST00000292808 SMC3Q9UQE7 1217 aa16.71■□□□□ 0.26
ABCF3-201ENST00000292808 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.71■□□□□ 0.26
ABCF3-201ENST00000292808 COL1A1P02452 1464 aaPredicted RBP16.7■□□□□ 0.26
ABCF3-201ENST00000292808 ADRA2BP18089 450 aa16.7■□□□□ 0.26
ABCF3-201ENST00000292808 CARMIL3Q8ND23 1372 aa16.7■□□□□ 0.26
ABCF3-201ENST00000292808 PDE6AP16499 860 aa16.7■□□□□ 0.26
ABCF3-201ENST00000292808 SLC27A3Q5K4L6 730 aa16.7■□□□□ 0.26
ABCF3-201ENST00000292808 SLC9C2Q5TAH2 1124 aa16.7■□□□□ 0.26
ABCF3-201ENST00000292808 NLRP3Q96P20 1036 aa16.7■□□□□ 0.26
ABCF3-201ENST00000292808 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.7■□□□□ 0.261e-6■■■■■ 48.8
ABCF3-201ENST00000292808 ZNF804BA4D1E1 1349 aa16.7■□□□□ 0.26
ABCF3-201ENST00000292808 WDR33Q9C0J8 1336 aaKnown RBP16.7■□□□□ 0.26
ABCF3-201ENST00000292808 GPAA1O43292 621 aa16.69■□□□□ 0.26
ABCF3-201ENST00000292808 IDH1O75874 414 aaKnown RBP16.69■□□□□ 0.26
ABCF3-201ENST00000292808 UBE3CQ15386 1083 aa16.69■□□□□ 0.26
ABCF3-201ENST00000292808 NECAB1Q8N987 351 aa16.69■□□□□ 0.26
ABCF3-201ENST00000292808 ZSCAN31Q96LW9 406 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-201ENST00000292808 GPT2Q8TD30 523 aa16.69■□□□□ 0.26
ABCF3-201ENST00000292808 SH2B1Q9NRF2 756 aaPredicted RBP16.69■□□□□ 0.26
ABCF3-201ENST00000292808 ZNF532Q9HCE3 1301 aa16.69■□□□□ 0.26
ABCF3-201ENST00000292808 GYS1P13807 737 aa16.68■□□□□ 0.26
ABCF3-201ENST00000292808 RBM6P78332 1123 aaKnown RBP16.68■□□□□ 0.26
ABCF3-201ENST00000292808 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
ABCF3-201ENST00000292808 E7EWF7 191 aa16.67■□□□□ 0.26
ABCF3-201ENST00000292808 GYG1P46976 350 aa16.67■□□□□ 0.26
ABCF3-201ENST00000292808 RPS8P62241 208 aaKnown RBP16.67■□□□□ 0.26
ABCF3-201ENST00000292808 ZSCAN25Q6NSZ9 544 aa16.67■□□□□ 0.26
ABCF3-201ENST00000292808 RBM27Q9P2N5 1060 aaKnown RBP16.67■□□□□ 0.26
ABCF3-201ENST00000292808 FGAP02671 866 aa16.67■□□□□ 0.26
ABCF3-201ENST00000292808 SYT1P21579 422 aa16.67■□□□□ 0.26
ABCF3-201ENST00000292808 KLRK1P26718 216 aa16.67■□□□□ 0.26
ABCF3-201ENST00000292808 UBE4AQ14139 1066 aa16.67■□□□□ 0.26
ABCF3-201ENST00000292808 ZSCAN23Q3MJ62 389 aa16.67■□□□□ 0.26
ABCF3-201ENST00000292808 GJB2P29033 226 aa16.66■□□□□ 0.26
ABCF3-201ENST00000292808 TXNRD1Q16881 649 aa16.66■□□□□ 0.26
ABCF3-201ENST00000292808 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
ABCF3-201ENST00000292808 NSFL1CQ9UNZ2 370 aaKnown RBP16.66■□□□□ 0.26
ABCF3-201ENST00000292808 STX6O43752 255 aa16.65■□□□□ 0.26
ABCF3-201ENST00000292808 MBD3O95983 291 aa16.65■□□□□ 0.26
ABCF3-201ENST00000292808 EXOSC10Q01780 885 aaKnown RBP16.65■□□□□ 0.26
ABCF3-201ENST00000292808 ANKRD1Q15327 319 aa16.65■□□□□ 0.26
ABCF3-201ENST00000292808 PRR5LQ6MZQ0 368 aa16.65■□□□□ 0.26
ABCF3-201ENST00000292808 Q6ZUG5 572 aa16.65■□□□□ 0.26
ABCF3-201ENST00000292808 RRAGDQ9NQL2 400 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-201ENST00000292808 IQSEC3Q9UPP2 1182 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-201ENST00000292808 ZSCAN22P10073 491 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-201ENST00000292808 ZNF772Q68DY9 489 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-201ENST00000292808 LRRC2Q9BYS8 371 aa16.65■□□□□ 0.26
ABCF3-201ENST00000292808 CNBD1Q8NA66 436 aa16.64■□□□□ 0.26
ABCF3-201ENST00000292808 NBPF3Q9H094 633 aa16.64■□□□□ 0.26
ABCF3-201ENST00000292808 HAND2P61296 217 aa16.64■□□□□ 0.25
ABCF3-201ENST00000292808 CACNA1SQ13698 1873 aa16.64■□□□□ 0.25
ABCF3-201ENST00000292808 DHX32Q7L7V1 743 aaKnown RBP16.64■□□□□ 0.25
ABCF3-201ENST00000292808 MAGEB6Q8N7X4 407 aa16.64■□□□□ 0.25
ABCF3-201ENST00000292808 FAM84BQ96KN1 310 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-201ENST00000292808 IRS2Q9Y4H2 1338 aa16.64■□□□□ 0.25
ABCF3-201ENST00000292808 STRBPQ96SI9 672 aaKnown RBP16.63■□□□□ 0.25
ABCF3-201ENST00000292808 AGXT2Q9BYV1 514 aa16.63■□□□□ 0.25
ABCF3-201ENST00000292808 MYH13Q9UKX3 1938 aa16.63■□□□□ 0.25
ABCF3-201ENST00000292808 DDR1Q08345 913 aa16.63■□□□□ 0.25
ABCF3-201ENST00000292808 CTNNA3Q9UI47 895 aa16.63■□□□□ 0.25
ABCF3-201ENST00000292808 HMGB1P09429 215 aaKnown RBP16.62■□□□□ 0.25
ABCF3-201ENST00000292808 NASPP49321 788 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-201ENST00000292808 MAP3K12Q12852 859 aa16.62■□□□□ 0.25
ABCF3-201ENST00000292808 STK3Q13188 491 aa16.62■□□□□ 0.25
ABCF3-201ENST00000292808 ZNF827Q17R98 1081 aa16.62■□□□□ 0.25
ABCF3-201ENST00000292808 PPP1R9BQ96SB3 815 aa16.62■□□□□ 0.25
ABCF3-201ENST00000292808 FBXO33Q7Z6M2 555 aa16.62■□□□□ 0.25
ABCF3-201ENST00000292808 BRF1Q92994 677 aa16.62■□□□□ 0.25
ABCF3-201ENST00000292808 TNS1Q9HBL0 1735 aaKnown RBP16.62■□□□□ 0.25
ABCF3-201ENST00000292808 CCDC173Q0VFZ6 552 aa16.61■□□□□ 0.25
ABCF3-201ENST00000292808 IMMTQ16891 758 aaKnown RBP16.61■□□□□ 0.25
ABCF3-201ENST00000292808 USP48Q86UV5 1035 aa16.61■□□□□ 0.25
ABCF3-201ENST00000292808 NKX2-3Q8TAU0 364 aa16.61■□□□□ 0.25
ABCF3-201ENST00000292808 EPB41L4AQ9HCS5 686 aaPredicted RBP16.61■□□□□ 0.25
ABCF3-201ENST00000292808 TMEM63CQ9P1W3 806 aa16.61■□□□□ 0.25
ABCF3-201ENST00000292808 MBD4O95243 580 aa16.61■□□□□ 0.25
ABCF3-201ENST00000292808 F13A1P00488 732 aa16.61■□□□□ 0.25
ABCF3-201ENST00000292808 ADGRA1Q86SQ6 560 aa16.61■□□□□ 0.25
ABCF3-201ENST00000292808 GTF3C6Q969F1 213 aa16.61■□□□□ 0.25
ABCF3-201ENST00000292808 CNPY2Q9Y2B0 182 aa16.61■□□□□ 0.25
ABCF3-201ENST00000292808 VPS37CA5D8V6 355 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-201ENST00000292808 GADD45BO75293 160 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms