RNA–Protein interactions for RNA: ENST00000288447.8

DMD-201, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 3,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-201ENST00000288447 SLC5A9Q2M3M2 681 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 MUM1Q2TAK8 710 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 NBPF8Q3BBV2 869 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.88□□□□□ -1.79
DMD-201ENST00000288447 DUSP27Q5VZP5 1158 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 NCAPG2Q86XI2 1143 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 ZNF606Q8WXB4 792 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 E2F7Q96AV8 911 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 STRBPQ96SI9 672 aaKnown RBP3.88□□□□□ -1.79
DMD-201ENST00000288447 DUSP9Q99956 384 aaKnown RBP3.88□□□□□ -1.79
DMD-201ENST00000288447 RXFP3Q9NSD7 469 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 NCAPD3P42695 1498 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 GNPATO15228 680 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 PDE4AP27815 886 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 NOP2P46087 812 aaKnown RBP3.88□□□□□ -1.79
DMD-201ENST00000288447 IRX5P78411 483 aaPredicted RBP3.88□□□□□ -1.79
DMD-201ENST00000288447 APBA1Q02410 837 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 C5orf22Q49AR2 442 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 COBLL1Q53SF7 1204 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 SPECC1Q5M775 1068 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 CC2D1AQ6P1N0 951 aaPredicted RBP3.88□□□□□ -1.79
DMD-201ENST00000288447 LVRNQ6Q4G3 990 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 TTC30AQ86WT1 665 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 OR8H1Q8NGG4 311 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 NUCKS1Q9H1E3 243 aaKnown RBP3.88□□□□□ -1.79
DMD-201ENST00000288447 NKIRAS2Q9NYR9 191 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 HDAC6Q9UBN7 1215 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 GTF3C4Q9UKN8 822 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 DGKGP49619 791 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 LRRC74AQ0VAA2 488 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 HIC1Q14526 733 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 SMC1AQ14683 1233 aaKnown RBP3.88□□□□□ -1.79
DMD-201ENST00000288447 ZNF579Q8NAF0 562 aaKnown RBP3.88□□□□□ -1.79
DMD-201ENST00000288447 BRSK1Q8TDC3 778 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 HELQQ8TDG4 1101 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 AFAP1L1Q8TED9 768 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 FNIP1Q8TF40 1166 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 NELL1Q92832 810 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 UPF1Q92900 1129 aaKnown RBP eCLIP3.88□□□□□ -1.79
DMD-201ENST00000288447 C1orf74Q96LT6 269 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 UROC1Q96N76 676 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 CCDC113Q9H0I3 377 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 SERINC1Q9NRX5 453 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 GTF2IRD1Q9UHL9 959 aa3.88□□□□□ -1.79
DMD-201ENST00000288447 GRXCR2A6NFK2 248 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 GOLGA6L6A8MZA4 724 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 POTEIP0CG38 1075 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 GYS1P13807 737 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 SLC5A1P13866 664 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 NLRP12P59046 1061 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 ARID5AQ03989 594 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 GNL2Q13823 731 aaKnown RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 CCDC14Q49A88 953 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 ARMC4Q5T2S8 1044 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 IRGCQ6NXR0 463 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 SAPCD2Q86UD0 394 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 DZIP1LQ8IYY4 767 aaKnown RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 RTKN2Q8IZC4 609 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 MYRIPQ8NFW9 859 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 RNF34Q969K3 372 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 RWDD1Q9H446 243 aaPredicted RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 CD93Q9NPY3 652 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 HOMER2Q9NSB8 354 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 BLOC1S6Q9UL45 172 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 SNCAIPQ9Y6H5 919 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 SOS1Q07889 1333 aaPredicted RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 CARNS1A5YM72 827 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 ALG1L2C9J202 215 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 MPHOSPH10O00566 681 aaKnown RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 KPNA6O60684 536 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 KRT18P05783 430 aaKnown RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 PREPLQ4J6C6 727 aaPredicted RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 TMEM164Q5U3C3 297 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 MRPL10Q7Z7H8 261 aaKnown RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 GABPB2Q8TAK5 448 aaPredicted RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 RTF1Q92541 710 aaKnown RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 KIF12Q96FN5 646 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 MS4A3Q96HJ5 214 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 ISCA1Q9BUE6 129 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 SELENOOQ9BVL4 669 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 ABCG4Q9H172 646 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 AS3MTQ9HBK9 375 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 IRAK4Q9NWZ3 460 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.87□□□□□ -1.79
DMD-201ENST00000288447 DCTN4Q9UJW0 460 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 TMEM98Q9Y2Y6 226 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 PRSS47A8MTI9 375 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 FOXN3O00409 490 aaPredicted RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 PLOD3O60568 738 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 Q3C1V9 767 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 GRAMD1BQ3KR37 738 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 MYSM1Q5VVJ2 828 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 PNMA8AQ86V59 439 aaPredicted RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 MAML2Q8IZL2 1156 aaPredicted RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 CLASRPQ8N2M8 674 aaKnown RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 TRPM4Q8TD43 1214 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 SKA1Q96BD8 255 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 GMCL1Q96IK5 515 aa3.87□□□□□ -1.79
DMD-201ENST00000288447 RSRC1Q96IZ7 334 aaKnown RBP3.87□□□□□ -1.79
DMD-201ENST00000288447 SLC13A1Q9BZW2 595 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms