RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 FERP16591 822 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 SF3B2Q13435 895 aaKnown RBP12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 ZNF394Q53GI3 561 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 TMC6Q7Z403 805 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 CEP57Q86XR8 500 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 CCDC125Q86Z20 511 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 CCAR2Q8N163 923 aaKnown RBP12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 CHAMP1Q96JM3 812 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 PDE11AQ9HCR9 933 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 NRBP1Q9UHY1 535 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 ERICH2A1L162 156 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 TIMM44O43615 452 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 MYO1BO43795 1136 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 KIF4AO95239 1232 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 SNW1Q13573 536 aaKnown RBP12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 KBTBD12Q3ZCT8 623 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 FAM71BQ8TC56 605 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 CUL5Q93034 780 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 GORASP1Q9BQQ3 440 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 IRF2BPLQ9H1B7 796 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 ITM2BQ9Y287 266 aa12.13□□□□□ -0.47
ERGIC3-201ENST00000279052 MCM2P49736 904 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 LONRF3Q496Y0 759 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 MIS18BP1Q6P0N0 1132 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 MTHFD1LQ6UB35 978 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 ARHGAP45Q92619 1136 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 RETREG1Q9H6L5 497 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 BARX2Q9UMQ3 279 aaPredicted RBP12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 VDRP11473 427 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 HARSP12081 509 aaKnown RBP12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 PDE6BP35913 854 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 LONRF2Q1L5Z9 754 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 Q4G0T1 1027 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 GORABQ5T7V8 394 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 BRAPQ7Z569 592 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 LRRC8AQ8IWT6 810 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 ZFAND2BQ8WV99 257 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 TAF4BQ92750 862 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 HOOK2Q96ED9 719 aa12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 PAPOLBQ9NRJ5 636 aaKnown RBP12.12□□□□□ -0.47
ERGIC3-201ENST00000279052 M0R2C6 588 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 IBSPP21815 317 aaPredicted RBP12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 CCDC170Q8IYT3 715 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 WDR37Q9Y2I8 494 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 MAGI2Q86UL8 1455 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 WDR7Q9Y4E6 1490 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 RPL13P26373 211 aaKnown RBP12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 SLC8A1P32418 973 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 ZNF75DP51815 510 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 ACTN3Q08043 901 aaPredicted RBP12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 PLA2G4DQ86XP0 818 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 ZGPATQ8N5A5 531 aaKnown RBP12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 FAM200AQ8TCP9 573 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 BHMTQ93088 406 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 TRIM11Q96F44 468 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 RUFY1Q96T51 708 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 SLC39A2Q9NP94 309 aa12.11□□□□□ -0.47
ERGIC3-201ENST00000279052 GADD45BO75293 160 aaPredicted RBP12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 CA8P35219 290 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 EVCP57679 992 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 POSTNQ15063 836 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 CCDC92Q53HC0 331 aaPredicted RBP12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 AFAP1Q8N556 730 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 ATP11CQ8NB49 1132 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 CLIC6Q96NY7 704 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 YIPF3Q9GZM5 350 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 PLCH2O75038 1416 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 CLASP1Q7Z460 1538 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 ABCC2Q92887 1545 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 CCDC151A5D8V7 595 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 CDC25BP30305 580 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 CCT5P48643 541 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 SMTNP53814 917 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 CUL3Q13618 768 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 SNCBQ16143 134 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 KIAA0753Q2KHM9 967 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 RNF168Q8IYW5 571 aaPredicted RBP12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 GPCPD1Q9NPB8 672 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 TRMT1Q9NXH9 659 aaKnown RBP12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 CORO1CQ9ULV4 474 aaPredicted RBP12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 CCDC192P0DO97 292 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 BRD3Q15059 726 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 HDXQ7Z353 690 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 CCDC65Q8IXS2 484 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 CCDC150Q8NCX0 1101 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 TRIM58Q8NG06 486 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 USP26Q9BXU7 913 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 TRIM5Q9C035 493 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 ARHGEF10LQ9HCE6 1279 aa12.1□□□□□ -0.47
ERGIC3-201ENST00000279052 KIF3BO15066 747 aa12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 TPPPO94811 219 aa12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 KIAA0754O94854 1291 aa12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 VIL1P09327 827 aaKnown RBP12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 ADCY1Q08828 1119 aa12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 PABPC4Q13310 644 aaKnown RBP eCLIP12.09□□□□□ -0.471e-6■□□□□ 10.8
ERGIC3-201ENST00000279052 TRIML1Q8N9V2 468 aa12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 RNF17Q9BXT8 1623 aaKnown RBP12.09□□□□□ -0.47
ERGIC3-201ENST00000279052 SMNDC1O75940 238 aaKnown RBP eCLIP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms