RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 GOLGA6AQ9NYA3 693 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 TRPC3Q13507 836 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 INF2Q27J81 1249 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 RGS22Q8NE09 1264 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 ODF2LQ9ULJ1 636 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 RABGAP1Q9Y3P9 1069 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 FAM13AO94988 1023 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 IGHDP01880 384 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 MAP7Q14244 749 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 TAOK1Q7L7X3 1001 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 HS2ST1Q7LGA3 356 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 IFT20Q8IY31 132 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 DHX58Q96C10 678 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 C6orf50Q9HD87 102 aa9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 RNF168Q8IYW5 571 aaPredicted RBP9.81□□□□□ -0.84
SCUBE3-201ENST00000274938 HAND2P61296 217 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 C8orf74Q6P047 294 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 BCAP29Q9UHQ4 241 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 RAD50Q92878 1312 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 CAMSAP2Q08AD1 1489 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 U2AF2P26368 475 aaKnown RBP eCLIP9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 RFC1P35251 1148 aaPredicted RBP9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 PDE1AP54750 535 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 MTMR3Q13615 1198 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 MCMDC2Q4G0Z9 681 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 VPS52Q8N1B4 723 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 SMIM23A6NLE4 172 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 AFAP1L2Q8N4X5 818 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 RPL13P26373 211 aaKnown RBP9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 IFIT1BQ5T764 474 aaKnown RBP9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 SPATS2Q86XZ4 545 aaKnown RBP9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 NUF2Q9BZD4 464 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 FAM114A2Q9NRY5 505 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 CHMP4BP1P59074 171 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 PPFIA1Q13136 1202 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 SH2D4BQ5SQS7 431 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 MYRIPQ8NFW9 859 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 PPP1R9BQ96SB3 815 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 WDR97A6NE52 1622 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 Q6ZUG5 572 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 IQUBQ8NA54 791 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 MCUR1Q96AQ8 359 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 VAT1LQ9HCJ6 419 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 ELP1O95163 1332 aa9.8□□□□□ -0.84
SCUBE3-201ENST00000274938 CCDC62Q6P9F0 684 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 SKAP1Q86WV1 359 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 TMEM110-MUSTN1A8MSY1 372 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 GKAP1Q5VSY0 366 aaPredicted RBP9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 CYP26C1Q6V0L0 522 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 CCDC25Q86WR0 208 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 IMPACTQ9P2X3 320 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 TSKSQ9UJT2 592 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 MAP3K2Q9Y2U5 619 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 TTC41PQ6P2S7 1318 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 LDHAL6AQ6ZMR3 332 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 PLCB1Q9NQ66 1216 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 ERCC5P28715 1186 aaPredicted RBP9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 KRT2P35908 639 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 ANKRD44Q8N8A2 993 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 GBP7Q8N8V2 638 aaPredicted RBP9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 MARCKSP29966 332 aaPredicted RBP9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 GJC1P36383 396 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 IGSF3O75054 1194 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 ALDH1L1O75891 902 aa9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 ZGPATQ8N5A5 531 aaKnown RBP9.79□□□□□ -0.84
SCUBE3-201ENST00000274938 FAM160A1Q05DH4 1040 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 VSIG1Q86XK7 387 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 TMEM87AQ8NBN3 555 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 GABPB2Q8TAK5 448 aaPredicted RBP9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 CABS1Q96KC9 395 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 GNAT2P19087 354 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 IRX4P78413 519 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 CYB5RLQ6IPT4 315 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 RPGRQ92834 1020 aaKnown RBP9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 RAB3IPQ96QF0 476 aaPredicted RBP9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 PPP1R12CQ9BZL4 782 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 TROQ12816 1431 aaPredicted RBP9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 GAS8O95995 478 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 MAP2K2P36507 400 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 HSP90AA4PQ58FG1 418 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 MAP3K21Q5TCX8 1036 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 UTP11Q9Y3A2 253 aaKnown RBP9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 TSPY3P0CV98 308 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 TSPY8P0CW00 308 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 STMN1P16949 149 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 PAK2Q13177 524 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 CCT6BQ92526 530 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 NCAPD3P42695 1498 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 NUP58Q9BVL2 599 aa9.78□□□□□ -0.84
SCUBE3-201ENST00000274938 RASSF2P50749 326 aa9.77□□□□□ -0.84
SCUBE3-201ENST00000274938 NAPAP54920 295 aa9.77□□□□□ -0.84
SCUBE3-201ENST00000274938 RAB11FIP4Q86YS3 637 aa9.77□□□□□ -0.84
SCUBE3-201ENST00000274938 RPGRIP1Q96KN7 1286 aa9.77□□□□□ -0.84
SCUBE3-201ENST00000274938 RNF10Q8N5U6 811 aaKnown RBP9.77□□□□□ -0.84
SCUBE3-201ENST00000274938 VCX3AQ9NNX9 186 aa9.77□□□□□ -0.84
SCUBE3-201ENST00000274938 GOLGA6BA6NDN3 693 aa9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 HPDP32754 393 aaPredicted RBP9.77□□□□□ -0.85
SCUBE3-201ENST00000274938 ARID5AQ03989 594 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms