RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 RBM27Q9P2N5 1060 aaKnown RBP12.9□□□□□ -0.34
SYCP3-201ENST00000266743 MANSC4A6NHS7 340 aaPredicted RBP12.89□□□□□ -0.35
SYCP3-201ENST00000266743 ALDH1A1P00352 501 aa12.89□□□□□ -0.35
SYCP3-201ENST00000266743 GJA5P36382 358 aa12.89□□□□□ -0.35
SYCP3-201ENST00000266743 SLC4A8Q2Y0W8 1093 aa12.89□□□□□ -0.35
SYCP3-201ENST00000266743 ERO1AQ96HE7 468 aa12.89□□□□□ -0.35
SYCP3-201ENST00000266743 WNK4Q96J92 1243 aa12.89□□□□□ -0.35
SYCP3-201ENST00000266743 ZNF333Q96JL9 665 aa12.89□□□□□ -0.35
SYCP3-201ENST00000266743 PTCH2Q9Y6C5 1203 aa12.89□□□□□ -0.35
SYCP3-201ENST00000266743 ZNF609O15014 1411 aa12.88□□□□□ -0.35
SYCP3-201ENST00000266743 NEFMP07197 916 aa12.88□□□□□ -0.35
SYCP3-201ENST00000266743 DACT2Q5SW24 774 aa12.88□□□□□ -0.35
SYCP3-201ENST00000266743 PTPN18Q99952 460 aa12.88□□□□□ -0.35
SYCP3-201ENST00000266743 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
SYCP3-201ENST00000266743 A0A0C4DFX4 3053 aa12.88□□□□□ -0.35
SYCP3-201ENST00000266743 DDX60Q8IY21 1712 aaKnown RBP12.88□□□□□ -0.35
SYCP3-201ENST00000266743 SP3Q02447 781 aa12.87□□□□□ -0.35
SYCP3-201ENST00000266743 TRIM26Q12899 539 aaPredicted RBP12.87□□□□□ -0.35
SYCP3-201ENST00000266743 ANKRD13DQ6ZTN6 518 aa12.87□□□□□ -0.35
SYCP3-201ENST00000266743 PLBD2Q8NHP8 589 aa12.87□□□□□ -0.35
SYCP3-201ENST00000266743 PCDHAC2Q9Y5I4 1007 aa12.87□□□□□ -0.35
SYCP3-201ENST00000266743 CEP290O15078 2479 aa12.87□□□□□ -0.35
SYCP3-201ENST00000266743 SLC9C1Q4G0N8 1177 aa12.86□□□□□ -0.35
SYCP3-201ENST00000266743 PODNQ7Z5L7 613 aa12.86□□□□□ -0.35
SYCP3-201ENST00000266743 KIAA0825Q8IV33 1275 aa12.86□□□□□ -0.35
SYCP3-201ENST00000266743 OGFOD1Q8N543 542 aa12.86□□□□□ -0.35
SYCP3-201ENST00000266743 SH3TC2Q8TF17 1288 aa12.86□□□□□ -0.35
SYCP3-201ENST00000266743 RANBP2P49792 3224 aaKnown RBP12.86□□□□□ -0.35
SYCP3-201ENST00000266743 CLSPNQ9HAW4 1339 aa12.86□□□□□ -0.35
SYCP3-201ENST00000266743 INHBEP58166 350 aa12.85□□□□□ -0.35
SYCP3-201ENST00000266743 TXNRD3Q86VQ6 643 aa12.85□□□□□ -0.35
SYCP3-201ENST00000266743 DEFB129Q9H1M3 183 aa12.85□□□□□ -0.35
SYCP3-201ENST00000266743 SSC5DA1L4H1 1573 aa12.85□□□□□ -0.35
SYCP3-201ENST00000266743 XDHP47989 1333 aa12.85□□□□□ -0.35
SYCP3-201ENST00000266743 ATP2B4P23634 1241 aa12.84□□□□□ -0.35
SYCP3-201ENST00000266743 KLRK1P26718 216 aa12.84□□□□□ -0.35
SYCP3-201ENST00000266743 APOBEC3FQ8IUX4 373 aaKnown RBP12.84□□□□□ -0.35
SYCP3-201ENST00000266743 DPF3Q92784 378 aa12.84□□□□□ -0.35
SYCP3-201ENST00000266743 RTN4Q9NQC3 1192 aaKnown RBP12.84□□□□□ -0.35
SYCP3-201ENST00000266743 AOX1Q06278 1338 aa12.84□□□□□ -0.35
SYCP3-201ENST00000266743 CLRN2A0PK11 232 aa12.83□□□□□ -0.36
SYCP3-201ENST00000266743 SOX1O00570 391 aaPredicted RBP12.83□□□□□ -0.36
SYCP3-201ENST00000266743 ZBTB48P10074 688 aaPredicted RBP12.83□□□□□ -0.36
SYCP3-201ENST00000266743 RIPK4P57078 832 aa12.83□□□□□ -0.36
SYCP3-201ENST00000266743 HDGFL1Q5TGJ6 251 aa12.83□□□□□ -0.36
SYCP3-201ENST00000266743 ZBED3Q96IU2 234 aaPredicted RBP12.83□□□□□ -0.36
SYCP3-201ENST00000266743 ARHGAP39Q9C0H5 1083 aa12.83□□□□□ -0.36
SYCP3-201ENST00000266743 LAS1LQ9Y4W2 734 aaKnown RBP12.83□□□□□ -0.36
SYCP3-201ENST00000266743 MAPK8IP3Q9UPT6 1336 aa12.83□□□□□ -0.36
SYCP3-201ENST00000266743 DLG5Q8TDM6 1919 aa12.82□□□□□ -0.36
SYCP3-201ENST00000266743 CCDC152Q4G0S7 254 aa12.82□□□□□ -0.36
SYCP3-201ENST00000266743 NBPF12Q5TAG4 269 aaPredicted RBP12.82□□□□□ -0.36
SYCP3-201ENST00000266743 ANKRD18AQ8IVF6 992 aa12.82□□□□□ -0.36
SYCP3-201ENST00000266743 PDCD7Q8N8D1 485 aaKnown RBP12.82□□□□□ -0.36
SYCP3-201ENST00000266743 ZBTB38Q8NAP3 1195 aaPredicted RBP12.82□□□□□ -0.36
SYCP3-201ENST00000266743 SHISA4Q96DD7 197 aa12.82□□□□□ -0.36
SYCP3-201ENST00000266743 COL6A3P12111 3177 aa12.82□□□□□ -0.36
SYCP3-201ENST00000266743 GTF2IP78347 998 aa12.81□□□□□ -0.36
SYCP3-201ENST00000266743 MTFR1Q15390 333 aa12.81□□□□□ -0.36
SYCP3-201ENST00000266743 MAP3K11Q16584 847 aa12.81□□□□□ -0.36
SYCP3-201ENST00000266743 STRIP1Q5VSL9 837 aa12.81□□□□□ -0.36
SYCP3-201ENST00000266743 TTLL5Q6EMB2 1281 aa12.81□□□□□ -0.36
SYCP3-201ENST00000266743 NBPF11Q86T75 865 aa12.81□□□□□ -0.36
SYCP3-201ENST00000266743 HS6ST3Q8IZP7 471 aa12.81□□□□□ -0.36
SYCP3-201ENST00000266743 LRCH3Q96II8 777 aa12.81□□□□□ -0.36
SYCP3-201ENST00000266743 MYD88Q99836 296 aa12.81□□□□□ -0.36
SYCP3-201ENST00000266743 ELP3Q9H9T3 547 aa12.81□□□□□ -0.36
SYCP3-201ENST00000266743 F8W031 263 aaPredicted RBP12.8□□□□□ -0.36
SYCP3-201ENST00000266743 PPP1R12BO60237 982 aaPredicted RBP12.8□□□□□ -0.36
SYCP3-201ENST00000266743 USP2O75604 605 aaPredicted RBP12.8□□□□□ -0.36
SYCP3-201ENST00000266743 TRIM28Q13263 835 aaKnown RBP12.8□□□□□ -0.36
SYCP3-201ENST00000266743 OTUD7BQ6GQQ9 843 aa12.8□□□□□ -0.36
SYCP3-201ENST00000266743 RIC3Q7Z5B4 369 aa12.8□□□□□ -0.36
SYCP3-201ENST00000266743 BRI3BPQ8WY22 251 aa12.8□□□□□ -0.36
SYCP3-201ENST00000266743 MINPP1Q9UNW1 487 aa12.8□□□□□ -0.36
SYCP3-201ENST00000266743 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
SYCP3-201ENST00000266743 RBBP6Q7Z6E9 1792 aaKnown RBP12.79□□□□□ -0.36
SYCP3-201ENST00000266743 TESPA1A2RU30 521 aaPredicted RBP12.79□□□□□ -0.36
SYCP3-201ENST00000266743 PDE8AO60658 829 aa12.79□□□□□ -0.36
SYCP3-201ENST00000266743 CCT4P50991 539 aaKnown RBP12.79□□□□□ -0.36
SYCP3-201ENST00000266743 DLGAP5Q15398 846 aa12.79□□□□□ -0.36
SYCP3-201ENST00000266743 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
SYCP3-201ENST00000266743 CDAN1Q8IWY9 1227 aa12.79□□□□□ -0.36
SYCP3-201ENST00000266743 OPTNQ96CV9 577 aa12.79□□□□□ -0.36
SYCP3-201ENST00000266743 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
SYCP3-201ENST00000266743 PRO3102Q9H379 93 aa12.79□□□□□ -0.36
SYCP3-201ENST00000266743 PHAXQ9H814 394 aaKnown RBP12.79□□□□□ -0.36
SYCP3-201ENST00000266743 VEZTQ9HBM0 779 aa12.79□□□□□ -0.36
SYCP3-201ENST00000266743 MYO3BQ8WXR4 1341 aa12.79□□□□□ -0.36
SYCP3-201ENST00000266743 CUL9Q8IWT3 2517 aa12.79□□□□□ -0.36
SYCP3-201ENST00000266743 TAF1CQ15572 869 aaPredicted RBP12.78□□□□□ -0.36
SYCP3-201ENST00000266743 FAM43AQ8N2R8 423 aa12.78□□□□□ -0.36
SYCP3-201ENST00000266743 CERS5Q8N5B7 392 aa12.78□□□□□ -0.36
SYCP3-201ENST00000266743 COA1Q9GZY4 146 aa12.78□□□□□ -0.36
SYCP3-201ENST00000266743 GREM2Q9H772 168 aa12.78□□□□□ -0.36
SYCP3-201ENST00000266743 DBF4Q9UBU7 674 aaPredicted RBP12.78□□□□□ -0.36
SYCP3-201ENST00000266743 JAG2Q9Y219 1238 aa12.78□□□□□ -0.36
SYCP3-201ENST00000266743 SNAP23O00161 211 aa12.77□□□□□ -0.37
SYCP3-201ENST00000266743 CHL1O00533 1208 aa12.77□□□□□ -0.37
SYCP3-201ENST00000266743 PCCAP05165 728 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms