RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 HCLS1P14317 486 aaPredicted RBP11.14□□□□□ -0.63
SIM1-201ENST00000262901 ANKRD1Q15327 319 aa11.14□□□□□ -0.63
SIM1-201ENST00000262901 VPS53Q5VIR6 699 aa11.14□□□□□ -0.63
SIM1-201ENST00000262901 LDHAL6AQ6ZMR3 332 aa11.14□□□□□ -0.63
SIM1-201ENST00000262901 H7C1W4 665 aa11.14□□□□□ -0.63
SIM1-201ENST00000262901 ARID4AP29374 1257 aaPredicted RBP11.14□□□□□ -0.63
SIM1-201ENST00000262901 METTL24Q5JXM2 366 aa11.14□□□□□ -0.63
SIM1-201ENST00000262901 CALR3Q96L12 384 aaKnown RBP11.14□□□□□ -0.63
SIM1-201ENST00000262901 TRERF1Q96PN7 1200 aa11.14□□□□□ -0.63
SIM1-201ENST00000262901 SRP68Q9UHB9 627 aaKnown RBP11.14□□□□□ -0.63
SIM1-201ENST00000262901 LIMCH1Q9UPQ0 1083 aa11.14□□□□□ -0.63
SIM1-201ENST00000262901 PA2G4Q9UQ80 394 aaKnown RBP11.14□□□□□ -0.63
SIM1-201ENST00000262901 SPDYE4A6NLX3 237 aa11.14□□□□□ -0.63
SIM1-201ENST00000262901 PLEKHM2Q8IWE5 1019 aa11.14□□□□□ -0.63
SIM1-201ENST00000262901 CNBD1Q8NA66 436 aa11.14□□□□□ -0.63
SIM1-201ENST00000262901 NOC3LQ8WTT2 800 aaKnown RBP11.14□□□□□ -0.63
SIM1-201ENST00000262901 ARHGEF1Q92888 912 aaKnown RBP11.14□□□□□ -0.63
SIM1-201ENST00000262901 KDM3BQ7LBC6 1761 aa11.14□□□□□ -0.63
SIM1-201ENST00000262901 RGS12O14924 1447 aa11.14□□□□□ -0.63
SIM1-201ENST00000262901 TTC36A6NLP5 189 aa11.13□□□□□ -0.63
SIM1-201ENST00000262901 DHX16O60231 1041 aaKnown RBP11.13□□□□□ -0.63
SIM1-201ENST00000262901 MAP3K11Q16584 847 aa11.13□□□□□ -0.63
SIM1-201ENST00000262901 TMTC2Q8N394 836 aa11.13□□□□□ -0.63
SIM1-201ENST00000262901 NECAB1Q8N987 351 aa11.13□□□□□ -0.63
SIM1-201ENST00000262901 ZSCAN31Q96LW9 406 aaPredicted RBP11.13□□□□□ -0.63
SIM1-201ENST00000262901 AKAP2Q9Y2D5 859 aa11.13□□□□□ -0.63
SIM1-201ENST00000262901 PLSCR1O15162 318 aa11.13□□□□□ -0.63
SIM1-201ENST00000262901 CAMTA2O94983 1202 aa11.13□□□□□ -0.63
SIM1-201ENST00000262901 IL15P40933 162 aaPredicted RBP11.13□□□□□ -0.63
SIM1-201ENST00000262901 DDX46Q7L014 1031 aaKnown RBP11.13□□□□□ -0.63
SIM1-201ENST00000262901 NLGN1Q8N2Q7 840 aa11.13□□□□□ -0.63
SIM1-201ENST00000262901 RPGRQ92834 1020 aaKnown RBP11.13□□□□□ -0.63
SIM1-201ENST00000262901 TMX1Q9H3N1 280 aa11.13□□□□□ -0.63
SIM1-201ENST00000262901 PARP3Q9Y6F1 533 aa11.13□□□□□ -0.63
SIM1-201ENST00000262901 KCPQ6ZWJ8 1503 aa11.13□□□□□ -0.63
SIM1-201ENST00000262901 GLI3P10071 1580 aa11.13□□□□□ -0.63
SIM1-201ENST00000262901 DYNC1I1O14576 645 aa11.12□□□□□ -0.63
SIM1-201ENST00000262901 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
SIM1-201ENST00000262901 TTC39AQ5SRH9 613 aa11.12□□□□□ -0.63
SIM1-201ENST00000262901 CCDC158Q5M9N0 1113 aa11.12□□□□□ -0.63
SIM1-201ENST00000262901 OLFM4Q6UX06 510 aa11.12□□□□□ -0.63
SIM1-201ENST00000262901 ZNF396Q96N95 335 aaPredicted RBP11.12□□□□□ -0.63
SIM1-201ENST00000262901 STX6O43752 255 aa11.12□□□□□ -0.63
SIM1-201ENST00000262901 CTSWP56202 376 aa11.12□□□□□ -0.63
SIM1-201ENST00000262901 CCDC183Q5T5S1 534 aa11.12□□□□□ -0.63
SIM1-201ENST00000262901 GIMAP6Q6P9H5 292 aa11.12□□□□□ -0.63
SIM1-201ENST00000262901 PIK3R5Q8WYR1 880 aa11.12□□□□□ -0.63
SIM1-201ENST00000262901 SNX21Q969T3 373 aa11.12□□□□□ -0.63
SIM1-201ENST00000262901 TULP2O00295 520 aa11.11□□□□□ -0.63
SIM1-201ENST00000262901 GJB2P29033 226 aa11.11□□□□□ -0.63
SIM1-201ENST00000262901 SIRT2Q8IXJ6 389 aa11.11□□□□□ -0.63
SIM1-201ENST00000262901 HOOK1Q9UJC3 728 aaKnown RBP11.11□□□□□ -0.63
SIM1-201ENST00000262901 RAB3GAP1Q15042 981 aa11.11□□□□□ -0.63
SIM1-201ENST00000262901 SUSD4Q5VX71 490 aa11.11□□□□□ -0.63
SIM1-201ENST00000262901 ANKRD18AQ8IVF6 992 aa11.11□□□□□ -0.63
SIM1-201ENST00000262901 CCDC112Q8NEF3 446 aa11.11□□□□□ -0.63
SIM1-201ENST00000262901 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
SIM1-201ENST00000262901 ITGA6P23229 1130 aa11.11□□□□□ -0.63
SIM1-201ENST00000262901 CCT2P78371 535 aaKnown RBP11.11□□□□□ -0.63
SIM1-201ENST00000262901 MTX1Q13505 466 aa11.11□□□□□ -0.63
SIM1-201ENST00000262901 ILDR1Q86SU0 546 aaPredicted RBP11.11□□□□□ -0.63
SIM1-201ENST00000262901 ZNF34Q8IZ26 560 aa11.11□□□□□ -0.63
SIM1-201ENST00000262901 ESYT1Q9BSJ8 1104 aa11.11□□□□□ -0.63
SIM1-201ENST00000262901 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.11□□□□□ -0.63
SIM1-201ENST00000262901 DOT1LQ8TEK3 1739 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 G3V3G9 751 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 SERPINC1P01008 464 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 LRP10Q7Z4F1 713 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 EYA2O00167 538 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 TSC1Q92574 1164 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 CNPY2Q9Y2B0 182 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 CDHR2Q9BYE9 1310 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 CACNA1FO60840 1977 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 IPO7O95373 1038 aaKnown RBP11.1□□□□□ -0.63
SIM1-201ENST00000262901 ADCY5O95622 1261 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 CCDC172P0C7W6 258 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 UTYO14607 1347 aa11.1□□□□□ -0.63
SIM1-201ENST00000262901 IDH1O75874 414 aaKnown RBP11.09□□□□□ -0.63
SIM1-201ENST00000262901 KLHDC4Q8TBB5 520 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 LRRC2Q9BYS8 371 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 COPRSQ9NQ92 184 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 CFAP45Q9UL16 551 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 RGL2O15211 777 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 CPA1P15085 419 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 POLA2Q14181 598 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 SMIM5Q71RC9 77 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 RAB11FIP4Q86YS3 637 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 ANKRD20A12PQ8NF67 263 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 MYCBPQ99417 103 aaPredicted RBP11.09□□□□□ -0.63
SIM1-201ENST00000262901 ADAMTS7Q9UKP4 1686 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 IFIT1P09914 478 aaKnown RBP11.09□□□□□ -0.63
SIM1-201ENST00000262901 TBC1D9BQ66K14 1250 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 ARMCX6Q7L4S7 300 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 CCDC82Q8N4S0 544 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 SNRKQ9NRH2 765 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 NBPF9Q3BBW0 867 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 CCDC125Q86Z20 511 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 NUP133Q8WUM0 1156 aa11.09□□□□□ -0.63
SIM1-201ENST00000262901 USP42Q9H9J4 1324 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms