RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ABT1Q9ULW3 272 aaKnown RBP15.46■□□□□ 0.06
PDGFRB-201ENST00000261799 MYCLP12524 364 aaPredicted RBP15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 CNGA1P29973 690 aa15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 ZSCAN12O43309 604 aa15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 STAMBPO95630 424 aa15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 IFI16Q16666 785 aaKnown RBP15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 EP400NLQ6ZTU2 488 aa15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 TEKT1Q969V4 418 aa15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 DNM2P50570 870 aa15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 CCDC102BQ68D86 513 aa15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 RGS22Q8NE09 1264 aa15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 NBPF3Q9H094 633 aa15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 SLC8A3P57103 927 aa15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 TCOF1Q13428 1488 aaKnown RBP15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 ARMC9Q7Z3E5 817 aa15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 CCDC24Q8N4L8 307 aa15.45■□□□□ 0.06
PDGFRB-201ENST00000261799 ZSCAN16Q9H4T2 348 aaPredicted RBP15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 UGGT1Q9NYU2 1555 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 TCP10Q12799 353 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 UNC5CLQ8IV45 518 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 BRF1Q92994 677 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 EYA2O00167 538 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 NMIQ13287 307 aaPredicted RBP15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 IFT74Q96LB3 600 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 GTPBP4Q9BZE4 634 aaKnown RBP15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 TSHZ3Q63HK5 1081 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 LUZP1Q86V48 1076 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 HELLSQ9NRZ9 838 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 KIF5CO60282 957 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 HOXB7P09629 217 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 PAGR1Q9BTK6 254 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 CEP83Q9Y592 693 aa15.44■□□□□ 0.06
PDGFRB-201ENST00000261799 PPEF1O14829 653 aaPredicted RBP15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 EIF3JO75822 258 aaKnown RBP15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 KMT5BQ4FZB7 885 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 RRAGBQ5VZM2 374 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 GOLGA6L7A0A1B0GV03 622 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 H0YHG0 523 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 OSBPP22059 807 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 STRN3Q13033 797 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 CCDC183Q5T5S1 534 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 SMTNP53814 917 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 LPIN2Q92539 896 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 GOLGA1Q92805 767 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 TSPOAP1O95153 1857 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 PLEKHG1Q9ULL1 1385 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 ASIC1P78348 528 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 DALRD3Q5D0E6 543 aaKnown RBP15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 SBNO2Q9Y2G9 1366 aa15.43■□□□□ 0.06
PDGFRB-201ENST00000261799 FILIP1Q7Z7B0 1213 aa15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 USP40Q9NVE5 1235 aa15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 RBM8AQ9Y5S9 174 aaKnown RBP15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 TMCO5BA8MYB1 307 aa15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 NR1I2O75469 434 aa15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 Q6ZUG5 572 aa15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 PANK2Q9BZ23 570 aa15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 A1BGP04217 495 aa15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 HS2ST1Q7LGA3 356 aa15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 PLVAPQ9BX97 442 aa15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 DDX19AQ9NUU7 478 aaKnown RBP15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 POLR3AO14802 1390 aaPredicted RBP15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 PTPRKQ15262 1439 aa15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 OTUD6BQ8N6M0 293 aa15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 ATF5Q9Y2D1 282 aaPredicted RBP15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 GCOM1H8Y6P7 765 aaPredicted RBP15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 MYZAPP0CAP1 466 aa15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 CWC15Q9P013 229 aaKnown RBP15.42■□□□□ 0.06
PDGFRB-201ENST00000261799 SAMD9Q5K651 1589 aa15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 FAM193AP78312 1265 aa15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 FAM47CQ5HY64 1035 aa15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 EFCAB6Q5THR3 1501 aa15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 AATFQ9NY61 560 aaKnown RBP eCLIP15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 TTF2Q9UNY4 1162 aaKnown RBP15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 GTF2IP78347 998 aa15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 DHX37Q8IY37 1157 aaKnown RBP15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 TSPYL1Q9H0U9 437 aa15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 ZEB2O60315 1214 aa15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 SFPQP23246 707 aaKnown RBP eCLIP15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 FCHSD1Q86WN1 690 aa15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 ANKRD44Q8N8A2 993 aa15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 DDX12PQ92771 950 aa15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 KDM5DQ9BY66 1539 aa15.41■□□□□ 0.06
PDGFRB-201ENST00000261799 STX1AQ16623 288 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 SEPT12Q8IYM1 358 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 CCDC171Q6TFL3 1326 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 XAGE2Q96GT9 111 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 EXOC7Q9UPT5 735 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 NLRX1Q86UT6 975 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 LARP6Q9BRS8 491 aaKnown RBP15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 KDM5CP41229 1560 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 FERP16591 822 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 CASQ1P31415 396 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 SLC1A4P43007 532 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 CCDC184Q52MB2 194 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 TMC4Q7Z404 712 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 PAFAH1B1P43034 410 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 CCNA1P78396 465 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 GCKRQ14397 625 aa15.4■□□□□ 0.06
PDGFRB-201ENST00000261799 ARMT1Q9H993 441 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms