RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 DOCK2Q92608 1830 aa33.01■■■□□ 2.88
CCM2-201ENST00000258781 RPS6KB1P23443 525 aa33.01■■■□□ 2.87
CCM2-201ENST00000258781 OSBP2Q969R2 916 aa33.01■■■□□ 2.87
CCM2-201ENST00000258781 MYO5AQ9Y4I1 1855 aaKnown RBP33■■■□□ 2.87
CCM2-201ENST00000258781 M0R2C6 588 aa33■■■□□ 2.87
CCM2-201ENST00000258781 CHRNDQ07001 517 aa33■■■□□ 2.87
CCM2-201ENST00000258781 BSDC1Q9NW68 430 aaPredicted RBP33■■■□□ 2.87
CCM2-201ENST00000258781 TAF6LQ9Y6J9 622 aa33■■■□□ 2.87
CCM2-201ENST00000258781 ANKRD1Q15327 319 aa32.99■■■□□ 2.87
CCM2-201ENST00000258781 HSPD1P10809 573 aaKnown RBP32.99■■■□□ 2.87
CCM2-201ENST00000258781 RPS8P62241 208 aaKnown RBP32.99■■■□□ 2.87
CCM2-201ENST00000258781 CYP21A2P08686 494 aa32.98■■■□□ 2.87
CCM2-201ENST00000258781 GSE1Q14687 1217 aa32.98■■■□□ 2.87
CCM2-201ENST00000258781 LAMA4Q16363 1823 aa32.98■■■□□ 2.87
CCM2-201ENST00000258781 SNAP23O00161 211 aa32.97■■■□□ 2.87
CCM2-201ENST00000258781 PKP1Q13835 747 aa32.97■■■□□ 2.87
CCM2-201ENST00000258781 WASHC4Q2M389 1173 aa32.97■■■□□ 2.87
CCM2-201ENST00000258781 COL11A2P13942 1736 aaPredicted RBP32.97■■■□□ 2.87
CCM2-201ENST00000258781 KLRG2A4D1S0 409 aaPredicted RBP32.97■■■□□ 2.87
CCM2-201ENST00000258781 ZDHHC9Q9Y397 364 aa32.96■■■□□ 2.87
CCM2-201ENST00000258781 ZSCAN21Q9Y5A6 473 aaPredicted RBP32.96■■■□□ 2.87
CCM2-201ENST00000258781 BAG4O95429 457 aaKnown RBP32.95■■■□□ 2.87
CCM2-201ENST00000258781 ADD2P35612 726 aa32.95■■■□□ 2.87
CCM2-201ENST00000258781 NEK1Q96PY6 1258 aa32.95■■■□□ 2.87
CCM2-201ENST00000258781 PIH1D3Q9NQM4 214 aaKnown RBP32.95■■■□□ 2.87
CCM2-201ENST00000258781 SLC51AQ86UW1 340 aa32.95■■■□□ 2.86
CCM2-201ENST00000258781 SPATA5Q8NB90 893 aa32.95■■■□□ 2.86
CCM2-201ENST00000258781 RPGRQ92834 1020 aaKnown RBP32.95■■■□□ 2.86
CCM2-201ENST00000258781 BRIP1Q9BX63 1249 aa32.95■■■□□ 2.86
CCM2-201ENST00000258781 MINPP1Q9UNW1 487 aa32.95■■■□□ 2.86
CCM2-201ENST00000258781 GRAPQ13588 217 aa32.94■■■□□ 2.86
CCM2-201ENST00000258781 GRAPLQ8TC17 118 aaPredicted RBP32.94■■■□□ 2.86
CCM2-201ENST00000258781 GOLGA6L22H0YM25 854 aa32.93■■■□□ 2.86
CCM2-201ENST00000258781 UBE3CQ15386 1083 aa32.93■■■□□ 2.86
CCM2-201ENST00000258781 LARGE1O95461 756 aa32.92■■■□□ 2.86
CCM2-201ENST00000258781 BRD1O95696 1058 aa32.92■■■□□ 2.86
CCM2-201ENST00000258781 HMGB1P09429 215 aaKnown RBP32.92■■■□□ 2.86
CCM2-201ENST00000258781 CTNNA3Q9UI47 895 aa32.92■■■□□ 2.86
CCM2-201ENST00000258781 TRAK2O60296 914 aa32.91■■■□□ 2.86
CCM2-201ENST00000258781 RASGRF1Q13972 1273 aa32.91■■■□□ 2.86
CCM2-201ENST00000258781 UBE4AQ14139 1066 aa32.91■■■□□ 2.86
CCM2-201ENST00000258781 LARP6Q9BRS8 491 aaKnown RBP32.91■■■□□ 2.86
CCM2-201ENST00000258781 GOLGB1Q14789 3259 aaKnown RBP32.91■■■□□ 2.86
CCM2-201ENST00000258781 SLC9C2Q5TAH2 1124 aa32.91■■■□□ 2.86
CCM2-201ENST00000258781 PUS7LQ9H0K6 701 aaKnown RBP32.91■■■□□ 2.86
CCM2-201ENST00000258781 WTIPA6NIX2 430 aaPredicted RBP32.9■■■□□ 2.86
CCM2-201ENST00000258781 HOXA10P31260 410 aaPredicted RBP32.9■■■□□ 2.86
CCM2-201ENST00000258781 COL9A3Q14050 684 aaPredicted RBP32.9■■■□□ 2.86
CCM2-201ENST00000258781 TPCN1Q9ULQ1 816 aa32.89■■■□□ 2.86
CCM2-201ENST00000258781 IDH1O75874 414 aaKnown RBP32.88■■■□□ 2.85
CCM2-201ENST00000258781 TOB2Q14106 344 aaPredicted RBP32.88■■■□□ 2.85
CCM2-201ENST00000258781 ME3Q16798 604 aa32.88■■■□□ 2.85
CCM2-201ENST00000258781 RBM17Q96I25 401 aaKnown RBP32.88■■■□□ 2.85
CCM2-201ENST00000258781 GPAA1O43292 621 aa32.88■■■□□ 2.85
CCM2-201ENST00000258781 PDE6AP16499 860 aa32.88■■■□□ 2.85
CCM2-201ENST00000258781 STOX1Q6ZVD7 989 aa32.88■■■□□ 2.85
CCM2-201ENST00000258781 SLC16A10Q8TF71 515 aa32.88■■■□□ 2.85
CCM2-201ENST00000258781 ZNF804BA4D1E1 1349 aa32.87■■■□□ 2.85
CCM2-201ENST00000258781 FOXP2O15409 715 aa32.87■■■□□ 2.85
CCM2-201ENST00000258781 BCAMP50895 628 aa32.87■■■□□ 2.85
CCM2-201ENST00000258781 SKOR2Q2VWA4 1001 aaPredicted RBP32.87■■■□□ 2.85
CCM2-201ENST00000258781 SMC3Q9UQE7 1217 aa32.87■■■□□ 2.85
CCM2-201ENST00000258781 SRGNP10124 158 aa32.86■■■□□ 2.85
CCM2-201ENST00000258781 CCDC83Q8IWF9 413 aa32.86■■■□□ 2.85
CCM2-201ENST00000258781 CACNA1SQ13698 1873 aa32.86■■■□□ 2.85
CCM2-201ENST00000258781 TCRBV5S4A2TA0A5A2 114 aa32.86■■■□□ 2.85
CCM2-201ENST00000258781 WDR33Q9C0J8 1336 aaKnown RBP32.85■■■□□ 2.85
CCM2-201ENST00000258781 PDE6BP35913 854 aa32.85■■■□□ 2.85
CCM2-201ENST00000258781 MAP3K12Q12852 859 aa32.85■■■□□ 2.85
CCM2-201ENST00000258781 ZNF532Q9HCE3 1301 aa32.85■■■□□ 2.85
CCM2-201ENST00000258781 TCEANC2Q96MN5 208 aa32.84■■■□□ 2.85
CCM2-201ENST00000258781 DHX32Q7L7V1 743 aaKnown RBP32.84■■■□□ 2.85
CCM2-201ENST00000258781 CRAMP1Q96RY5 1269 aa32.84■■■□□ 2.85
CCM2-201ENST00000258781 GNL3LQ9NVN8 582 aaKnown RBP32.84■■■□□ 2.85
CCM2-201ENST00000258781 WWC3Q9ULE0 1092 aa32.84■■■□□ 2.85
CCM2-201ENST00000258781 E7EWF7 191 aa32.83■■■□□ 2.85
CCM2-201ENST00000258781 ST3GAL1Q11201 340 aa32.83■■■□□ 2.85
CCM2-201ENST00000258781 R3HDM1Q15032 1099 aaKnown RBP32.83■■■□□ 2.85
CCM2-201ENST00000258781 IMMTQ16891 758 aaKnown RBP32.83■■■□□ 2.85
CCM2-201ENST00000258781 LRRC37AA6NMS7 1700 aa32.83■■■□□ 2.85
CCM2-201ENST00000258781 ANKRD2Q9GZV1 360 aa32.82■■■□□ 2.85
CCM2-201ENST00000258781 ZBTB7AO95365 584 aa32.81■■■□□ 2.84
CCM2-201ENST00000258781 FGAP02671 866 aa32.81■■■□□ 2.84
CCM2-201ENST00000258781 NPR1P16066 1061 aa32.8■■■□□ 2.84
CCM2-201ENST00000258781 TTLL5Q6EMB2 1281 aa32.8■■■□□ 2.84
CCM2-201ENST00000258781 Q6ZUG5 572 aa32.8■■■□□ 2.84
CCM2-201ENST00000258781 EXOSC10Q01780 885 aaKnown RBP32.8■■■□□ 2.84
CCM2-201ENST00000258781 CAVIN4Q5BKX8 364 aa32.8■■■□□ 2.84
CCM2-201ENST00000258781 MCTP1Q6DN14 999 aa32.8■■■□□ 2.84
CCM2-201ENST00000258781 NECAB1Q8N987 351 aa32.79■■■□□ 2.84
CCM2-201ENST00000258781 C10orf71Q711Q0 1435 aa32.79■■■□□ 2.84
CCM2-201ENST00000258781 MYH13Q9UKX3 1938 aa32.78■■■□□ 2.84
CCM2-201ENST00000258781 A0A0G2JLW4 131 aa32.78■■■□□ 2.84
CCM2-201ENST00000258781 BBOX1O75936 387 aa32.78■■■□□ 2.84
CCM2-201ENST00000258781 KLRK1P26718 216 aa32.78■■■□□ 2.84
CCM2-201ENST00000258781 GJB2P29033 226 aa32.78■■■□□ 2.84
CCM2-201ENST00000258781 MAGEB6Q8N7X4 407 aa32.78■■■□□ 2.84
CCM2-201ENST00000258781 MASTLQ96GX5 879 aa32.78■■■□□ 2.84
CCM2-201ENST00000258781 AGXT2Q9BYV1 514 aa32.78■■■□□ 2.84
CCM2-201ENST00000258781 LTBP1Q14766 1721 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms