RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 WNK3Q9BYP7 1800 aa22.97■■□□□ 1.27
CDC42EP1-201ENST00000249014 SLIT2O94813 1529 aa22.97■■□□□ 1.27
CDC42EP1-201ENST00000249014 FDPSP14324 419 aaKnown RBP22.96■■□□□ 1.27
CDC42EP1-201ENST00000249014 DZIP3Q86Y13 1208 aaKnown RBP22.96■■□□□ 1.27
CDC42EP1-201ENST00000249014 MB21D2Q8IYB1 491 aaPredicted RBP22.96■■□□□ 1.27
CDC42EP1-201ENST00000249014 DOT1LQ8TEK3 1739 aa22.96■■□□□ 1.27
CDC42EP1-201ENST00000249014 FAM200AQ8TCP9 573 aa22.96■■□□□ 1.27
CDC42EP1-201ENST00000249014 CARMIL3Q8ND23 1372 aa22.96■■□□□ 1.27
CDC42EP1-201ENST00000249014 PDE8AO60658 829 aa22.95■■□□□ 1.26
CDC42EP1-201ENST00000249014 PDE8BO95263 885 aa22.95■■□□□ 1.26
CDC42EP1-201ENST00000249014 GUCY1B3Q02153 619 aa22.95■■□□□ 1.26
CDC42EP1-201ENST00000249014 KIF3AQ9Y496 699 aa22.95■■□□□ 1.26
CDC42EP1-201ENST00000249014 ERVV-1B6SEH8 477 aa22.94■■□□□ 1.26
CDC42EP1-201ENST00000249014 PRC1O43663 620 aa22.94■■□□□ 1.26
CDC42EP1-201ENST00000249014 ADD2P35612 726 aa22.94■■□□□ 1.26
CDC42EP1-201ENST00000249014 ANTXR2P58335 489 aa22.94■■□□□ 1.26
CDC42EP1-201ENST00000249014 ILDR1Q86SU0 546 aaPredicted RBP22.94■■□□□ 1.26
CDC42EP1-201ENST00000249014 ZNF512BQ96KM6 892 aaPredicted RBP22.94■■□□□ 1.26
CDC42EP1-201ENST00000249014 IL6STP40189 918 aaPredicted RBP22.94■■□□□ 1.26
CDC42EP1-201ENST00000249014 USP28Q96RU2 1077 aa22.94■■□□□ 1.26
CDC42EP1-201ENST00000249014 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.94■■□□□ 1.26
CDC42EP1-201ENST00000249014 TTC12Q9H892 705 aaPredicted RBP22.94■■□□□ 1.26
CDC42EP1-201ENST00000249014 PIH1D3Q9NQM4 214 aaKnown RBP22.94■■□□□ 1.26
CDC42EP1-201ENST00000249014 RCOR1Q9UKL0 485 aa22.94■■□□□ 1.26
CDC42EP1-201ENST00000249014 ANO6Q4KMQ2 910 aa22.93■■□□□ 1.26
CDC42EP1-201ENST00000249014 LUZP1Q86V48 1076 aa22.93■■□□□ 1.26
CDC42EP1-201ENST00000249014 ZNF34Q8IZ26 560 aa22.93■■□□□ 1.26
CDC42EP1-201ENST00000249014 R3HCC1Q9Y3T6 440 aaKnown RBP22.93■■□□□ 1.26
CDC42EP1-201ENST00000249014 PHKA1P46020 1223 aa22.93■■□□□ 1.26
CDC42EP1-201ENST00000249014 KIAA2012Q0VF49 1180 aa22.93■■□□□ 1.26
CDC42EP1-201ENST00000249014 SLC9C2Q5TAH2 1124 aa22.93■■□□□ 1.26
CDC42EP1-201ENST00000249014 NBPF3Q9H094 633 aa22.93■■□□□ 1.26
CDC42EP1-201ENST00000249014 ZNF213O14771 459 aa22.92■■□□□ 1.26
CDC42EP1-201ENST00000249014 TPM2P07951 284 aa22.92■■□□□ 1.26
CDC42EP1-201ENST00000249014 CCDC102BQ68D86 513 aa22.92■■□□□ 1.26
CDC42EP1-201ENST00000249014 NCOA7Q8NI08 942 aa22.92■■□□□ 1.26
CDC42EP1-201ENST00000249014 HPS5Q9UPZ3 1129 aa22.92■■□□□ 1.26
CDC42EP1-201ENST00000249014 LRP5O75197 1615 aa22.92■■□□□ 1.26
CDC42EP1-201ENST00000249014 ATRNO75882 1429 aa22.92■■□□□ 1.26
CDC42EP1-201ENST00000249014 KLF18A0A0U1RQI7 1052 aa22.91■■□□□ 1.26
CDC42EP1-201ENST00000249014 HELBQ8NG08 1087 aaPredicted RBP22.91■■□□□ 1.26
CDC42EP1-201ENST00000249014 CBX8Q9HC52 389 aa22.91■■□□□ 1.26
CDC42EP1-201ENST00000249014 DENND2AQ9ULE3 1009 aa22.91■■□□□ 1.26
CDC42EP1-201ENST00000249014 ROBO1Q9Y6N7 1651 aa22.91■■□□□ 1.26
CDC42EP1-201ENST00000249014 ZSCAN25Q6NSZ9 544 aa22.9■■□□□ 1.26
CDC42EP1-201ENST00000249014 RAB11FIP4Q86YS3 637 aa22.9■■□□□ 1.26
CDC42EP1-201ENST00000249014 NKX2-3Q8TAU0 364 aa22.9■■□□□ 1.26
CDC42EP1-201ENST00000249014 ARAP2Q8WZ64 1704 aa22.9■■□□□ 1.26
CDC42EP1-201ENST00000249014 IDH1O75874 414 aaKnown RBP22.9■■□□□ 1.26
CDC42EP1-201ENST00000249014 ARID4AP29374 1257 aaPredicted RBP22.9■■□□□ 1.26
CDC42EP1-201ENST00000249014 TTF1Q15361 905 aaPredicted RBP22.9■■□□□ 1.26
CDC42EP1-201ENST00000249014 GOLPH3LQ9H4A5 285 aa22.9■■□□□ 1.26
CDC42EP1-201ENST00000249014 COL22A1Q8NFW1 1626 aaPredicted RBP22.9■■□□□ 1.26
CDC42EP1-201ENST00000249014 GOLGA8BA8MQT2 603 aa22.89■■□□□ 1.26
CDC42EP1-201ENST00000249014 RALYLQ86SE5 291 aaKnown RBP22.89■■□□□ 1.26
CDC42EP1-201ENST00000249014 CHMP4CQ96CF2 233 aa22.89■■□□□ 1.26
CDC42EP1-201ENST00000249014 FGFR2P21802 821 aa22.89■■□□□ 1.25
CDC42EP1-201ENST00000249014 TERF1P54274 439 aa22.89■■□□□ 1.25
CDC42EP1-201ENST00000249014 UBE3CQ15386 1083 aa22.89■■□□□ 1.25
CDC42EP1-201ENST00000249014 OTUD7BQ6GQQ9 843 aa22.89■■□□□ 1.25
CDC42EP1-201ENST00000249014 CCAR1Q8IX12 1150 aaKnown RBP22.89■■□□□ 1.25
CDC42EP1-201ENST00000249014 ZNF396Q96N95 335 aaPredicted RBP22.89■■□□□ 1.25
CDC42EP1-201ENST00000249014 WWC3Q9ULE0 1092 aa22.89■■□□□ 1.25
CDC42EP1-201ENST00000249014 ZNF532Q9HCE3 1301 aa22.89■■□□□ 1.25
CDC42EP1-201ENST00000249014 C4AP0C0L4 1744 aa22.88■■□□□ 1.25
CDC42EP1-201ENST00000249014 C4BP0C0L5 1744 aa22.88■■□□□ 1.25
CDC42EP1-201ENST00000249014 EIF5P55010 431 aaKnown RBP22.88■■□□□ 1.25
CDC42EP1-201ENST00000249014 SUSD4Q5VX71 490 aa22.88■■□□□ 1.25
CDC42EP1-201ENST00000249014 ATL3Q6DD88 541 aa22.88■■□□□ 1.25
CDC42EP1-201ENST00000249014 TBC1D10CQ8IV04 446 aa22.88■■□□□ 1.25
CDC42EP1-201ENST00000249014 PUM3Q15397 648 aaKnown RBP22.87■■□□□ 1.25
CDC42EP1-201ENST00000249014 INTS5Q6P9B9 1019 aaKnown RBP22.87■■□□□ 1.25
CDC42EP1-201ENST00000249014 SASS6Q6UVJ0 657 aa22.87■■□□□ 1.25
CDC42EP1-201ENST00000249014 PIBF1Q8WXW3 757 aa22.87■■□□□ 1.25
CDC42EP1-201ENST00000249014 TCRBV5S4A2TA0A5A2 114 aa22.87■■□□□ 1.25
CDC42EP1-201ENST00000249014 PDE6AP16499 860 aa22.87■■□□□ 1.25
CDC42EP1-201ENST00000249014 SNW1Q13573 536 aaKnown RBP22.87■■□□□ 1.25
CDC42EP1-201ENST00000249014 LPIN2Q92539 896 aa22.87■■□□□ 1.25
CDC42EP1-201ENST00000249014 MROH5Q6ZUA9 1318 aa22.86■■□□□ 1.25
CDC42EP1-201ENST00000249014 WDR19Q8NEZ3 1342 aa22.86■■□□□ 1.25
CDC42EP1-201ENST00000249014 SNAP23O00161 211 aa22.86■■□□□ 1.25
CDC42EP1-201ENST00000249014 SPC24Q8NBT2 197 aa22.86■■□□□ 1.25
CDC42EP1-201ENST00000249014 DNAJC25Q9H1X3 360 aa22.86■■□□□ 1.25
CDC42EP1-201ENST00000249014 FAM177BA6PVY3 158 aa22.86■■□□□ 1.25
CDC42EP1-201ENST00000249014 UQCRFS1P1P0C7P4 283 aa22.86■■□□□ 1.25
CDC42EP1-201ENST00000249014 C17orf53Q8N3J3 647 aaPredicted RBP22.86■■□□□ 1.25
CDC42EP1-201ENST00000249014 GJB4Q9NTQ9 266 aa22.86■■□□□ 1.25
CDC42EP1-201ENST00000249014 DHX16O60231 1041 aaKnown RBP22.85■■□□□ 1.25
CDC42EP1-201ENST00000249014 CYB5R4Q7L1T6 521 aa22.85■■□□□ 1.25
CDC42EP1-201ENST00000249014 KCNF1Q9H3M0 494 aa22.85■■□□□ 1.25
CDC42EP1-201ENST00000249014 ORC3Q9UBD5 711 aaPredicted RBP22.85■■□□□ 1.25
CDC42EP1-201ENST00000249014 APPP05067 770 aa22.84■■□□□ 1.25
CDC42EP1-201ENST00000249014 ENGASEQ8NFI3 743 aa22.84■■□□□ 1.25
CDC42EP1-201ENST00000249014 C8orf76Q96K31 380 aa22.84■■□□□ 1.25
CDC42EP1-201ENST00000249014 DOCK2Q92608 1830 aa22.84■■□□□ 1.25
CDC42EP1-201ENST00000249014 PHLPP1O60346 1717 aa22.84■■□□□ 1.25
CDC42EP1-201ENST00000249014 ZNF165P49910 485 aa22.84■■□□□ 1.25
CDC42EP1-201ENST00000249014 NOLC1Q14978 699 aaKnown RBP eCLIP22.84■■□□□ 1.25
CDC42EP1-201ENST00000249014 FBXO18Q8NFZ0 1043 aa22.84■■□□□ 1.25
CDC42EP1-201ENST00000249014 SEC31BQ9NQW1 1179 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms