RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 VGLL2Q8N8G2 317 aa18.55■□□□□ 0.56
LRFN1-201ENST00000248668 NKX2-3Q8TAU0 364 aa18.55■□□□□ 0.56
LRFN1-201ENST00000248668 MPHOSPH8Q99549 860 aa18.55■□□□□ 0.56
LRFN1-201ENST00000248668 NIP7Q9Y221 180 aaKnown RBP eCLIP18.55■□□□□ 0.56
LRFN1-201ENST00000248668 SPATA31A1Q5TZJ5 1347 aa18.55■□□□□ 0.56
LRFN1-201ENST00000248668 EIF5P55010 431 aaKnown RBP18.55■□□□□ 0.56
LRFN1-201ENST00000248668 PRC1O43663 620 aa18.55■□□□□ 0.56
LRFN1-201ENST00000248668 ZFYP08048 801 aaPredicted RBP18.55■□□□□ 0.56
LRFN1-201ENST00000248668 RESTQ13127 1097 aa18.55■□□□□ 0.56
LRFN1-201ENST00000248668 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.54■□□□□ 0.56
LRFN1-201ENST00000248668 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.54■□□□□ 0.56
LRFN1-201ENST00000248668 INCENPQ9NQS7 918 aa18.54■□□□□ 0.56
LRFN1-201ENST00000248668 ZNF532Q9HCE3 1301 aa18.54■□□□□ 0.56
LRFN1-201ENST00000248668 ZNF213O14771 459 aa18.54■□□□□ 0.56
LRFN1-201ENST00000248668 RXRAP19793 462 aa18.54■□□□□ 0.56
LRFN1-201ENST00000248668 BICDL1Q6ZP65 573 aa18.54■□□□□ 0.56
LRFN1-201ENST00000248668 RALYLQ86SE5 291 aaKnown RBP18.54■□□□□ 0.56
LRFN1-201ENST00000248668 GJB4Q9NTQ9 266 aa18.54■□□□□ 0.56
LRFN1-201ENST00000248668 ERVV-1B6SEH8 477 aa18.53■□□□□ 0.56
LRFN1-201ENST00000248668 TPM2P07951 284 aa18.53■□□□□ 0.56
LRFN1-201ENST00000248668 CTNNA3Q9UI47 895 aa18.53■□□□□ 0.56
LRFN1-201ENST00000248668 KLF18A0A0U1RQI7 1052 aa18.53■□□□□ 0.56
LRFN1-201ENST00000248668 PGBD1Q96JS3 809 aa18.53■□□□□ 0.56
LRFN1-201ENST00000248668 SCAND2PQ9GZW5 306 aaPredicted RBP18.53■□□□□ 0.56
LRFN1-201ENST00000248668 ADD2P35612 726 aa18.53■□□□□ 0.56
LRFN1-201ENST00000248668 ZNF830Q96NB3 372 aaPredicted RBP18.53■□□□□ 0.56
LRFN1-201ENST00000248668 UTP14AQ9BVJ6 771 aaKnown RBP18.53■□□□□ 0.56
LRFN1-201ENST00000248668 NUP62CLQ9H1M0 184 aa18.53■□□□□ 0.56
LRFN1-201ENST00000248668 COL14A1Q05707 1796 aaKnown RBP18.53■□□□□ 0.56
LRFN1-201ENST00000248668 LRP6O75581 1613 aa18.52■□□□□ 0.56
LRFN1-201ENST00000248668 GOLGA8BA8MQT2 603 aa18.52■□□□□ 0.56
LRFN1-201ENST00000248668 SMARCC2Q8TAQ2 1214 aa18.52■□□□□ 0.56
LRFN1-201ENST00000248668 LAMA4Q16363 1823 aa18.52■□□□□ 0.56
LRFN1-201ENST00000248668 FAM98CQ17RN3 349 aaKnown RBP18.52■□□□□ 0.56
LRFN1-201ENST00000248668 WTIPA6NIX2 430 aaPredicted RBP18.51■□□□□ 0.55
LRFN1-201ENST00000248668 NR1I2O75469 434 aa18.51■□□□□ 0.55
LRFN1-201ENST00000248668 PUM3Q15397 648 aaKnown RBP18.51■□□□□ 0.55
LRFN1-201ENST00000248668 COL16A1Q07092 1604 aaPredicted RBP18.51■□□□□ 0.55
LRFN1-201ENST00000248668 PDE6AP16499 860 aa18.51■□□□□ 0.55
LRFN1-201ENST00000248668 BCAMP50895 628 aa18.51■□□□□ 0.55
LRFN1-201ENST00000248668 CCDC144CPQ8IYA2 1237 aa18.51■□□□□ 0.55
LRFN1-201ENST00000248668 SLIT2O94813 1529 aa18.51■□□□□ 0.55
LRFN1-201ENST00000248668 ANTXR2P58335 489 aa18.51■□□□□ 0.55
LRFN1-201ENST00000248668 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.51■□□□□ 0.55
LRFN1-201ENST00000248668 NUP98P52948 1817 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 CAMTA2O94983 1202 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 LETM1O95202 739 aaPredicted RBP18.5■□□□□ 0.55
LRFN1-201ENST00000248668 RASGRF1Q13972 1273 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 TBC1D10CQ8IV04 446 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 MAGEB6Q8N7X4 407 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 TNMDQ9H2S6 317 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 ADCY5O95622 1261 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 MCM5P33992 734 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 NCOA7Q8NI08 942 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 LPIN2Q92539 896 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 AIDAQ96BJ3 306 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 AGXT2Q9BYV1 514 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 FAM182BQ5T319 152 aa18.5■□□□□ 0.55
LRFN1-201ENST00000248668 DOT1LQ8TEK3 1739 aa18.49■□□□□ 0.55
LRFN1-201ENST00000248668 MAP3K11Q16584 847 aa18.49■□□□□ 0.55
LRFN1-201ENST00000248668 CCDC24Q8N4L8 307 aa18.49■□□□□ 0.55
LRFN1-201ENST00000248668 LLPHQ9BRT6 129 aaKnown RBP18.49■□□□□ 0.55
LRFN1-201ENST00000248668 NBPF3Q9H094 633 aa18.49■□□□□ 0.55
LRFN1-201ENST00000248668 FDPSP14324 419 aaKnown RBP18.49■□□□□ 0.55
LRFN1-201ENST00000248668 MB21D2Q8IYB1 491 aaPredicted RBP18.49■□□□□ 0.55
LRFN1-201ENST00000248668 SPATA5Q8NB90 893 aa18.49■□□□□ 0.55
LRFN1-201ENST00000248668 FUCA2Q9BTY2 467 aa18.49■□□□□ 0.55
LRFN1-201ENST00000248668 B4E1Z4 1266 aa18.48■□□□□ 0.55
LRFN1-201ENST00000248668 POLR3DP05423 398 aaPredicted RBP18.48■□□□□ 0.55
LRFN1-201ENST00000248668 SLC5A1P13866 664 aa18.48■□□□□ 0.55
LRFN1-201ENST00000248668 HMGN5P82970 282 aaKnown RBP18.48■□□□□ 0.55
LRFN1-201ENST00000248668 USP28Q96RU2 1077 aa18.48■□□□□ 0.55
LRFN1-201ENST00000248668 SENP2Q9HC62 589 aa18.48■□□□□ 0.55
LRFN1-201ENST00000248668 ELP1O95163 1332 aa18.48■□□□□ 0.55
LRFN1-201ENST00000248668 CPLX1O14810 134 aa18.48■□□□□ 0.55
LRFN1-201ENST00000248668 ARMT1Q9H993 441 aa18.48■□□□□ 0.55
LRFN1-201ENST00000248668 TRDNQ13061 729 aa18.48■□□□□ 0.55
LRFN1-201ENST00000248668 MIGA1Q8NAN2 632 aa18.48■□□□□ 0.55
LRFN1-201ENST00000248668 ZNF274Q96GC6 653 aaPredicted RBP18.48■□□□□ 0.55
LRFN1-201ENST00000248668 NOL7Q9UMY1 257 aaKnown RBP18.48■□□□□ 0.55
LRFN1-201ENST00000248668 MYO5AQ9Y4I1 1855 aaKnown RBP18.48■□□□□ 0.55
LRFN1-201ENST00000248668 CARMIL3Q8ND23 1372 aa18.48■□□□□ 0.55
LRFN1-201ENST00000248668 MBD4O95243 580 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 CCDC192P0DO97 292 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 ZSCAN25Q6NSZ9 544 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 BBXQ8WY36 941 aaPredicted RBP18.47■□□□□ 0.55
LRFN1-201ENST00000248668 C8orf37Q96NL8 207 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 MYL10Q9BUA6 226 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 A0A087WWV3 80 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 PRKAB2O43741 272 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 CTDSPL2Q05D32 466 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 TTF1Q15361 905 aaPredicted RBP18.47■□□□□ 0.55
LRFN1-201ENST00000248668 CYB5R4Q7L1T6 521 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 TOMM22Q9NS69 142 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 CCDC39Q9UFE4 941 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 AP5Z1O43299 807 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 IGHMBP2P38935 993 aaKnown RBP18.47■□□□□ 0.55
LRFN1-201ENST00000248668 C3orf67Q6ZVT6 689 aa18.47■□□□□ 0.55
LRFN1-201ENST00000248668 ZSCAN16Q9H4T2 348 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms