RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 RASEFQ8IZ41 740 aa16.99■□□□□ 0.31
SDF2-201ENST00000247020 OSBP2Q969R2 916 aa16.99■□□□□ 0.31
SDF2-201ENST00000247020 PODXL2Q9NZ53 605 aa16.99■□□□□ 0.31
SDF2-201ENST00000247020 ALDH1B1P30837 517 aa16.98■□□□□ 0.31
SDF2-201ENST00000247020 HIBADHP31937 336 aaKnown RBP16.98■□□□□ 0.31
SDF2-201ENST00000247020 WASHC4Q2M389 1173 aa16.98■□□□□ 0.31
SDF2-201ENST00000247020 SLC9C2Q5TAH2 1124 aa16.98■□□□□ 0.31
SDF2-201ENST00000247020 CCDC129Q6ZRS4 1044 aa16.98■□□□□ 0.31
SDF2-201ENST00000247020 LAMA4Q16363 1823 aa16.98■□□□□ 0.31
SDF2-201ENST00000247020 M0R2C6 588 aa16.98■□□□□ 0.31
SDF2-201ENST00000247020 IDH1O75874 414 aaKnown RBP16.98■□□□□ 0.31
SDF2-201ENST00000247020 SRGNP10124 158 aa16.98■□□□□ 0.31
SDF2-201ENST00000247020 HSPD1P10809 573 aaKnown RBP16.98■□□□□ 0.31
SDF2-201ENST00000247020 PDE6AP16499 860 aa16.98■□□□□ 0.31
SDF2-201ENST00000247020 ATP2B4P23634 1241 aa16.98■□□□□ 0.31
SDF2-201ENST00000247020 GYG1P46976 350 aa16.98■□□□□ 0.31
SDF2-201ENST00000247020 ZSWIM6Q9HCJ5 1215 aa16.98■□□□□ 0.31
SDF2-201ENST00000247020 ANKIB1Q9P2G1 1089 aa16.98■□□□□ 0.31
SDF2-201ENST00000247020 TCRBV5S4A2TA0A5A2 114 aa16.97■□□□□ 0.31
SDF2-201ENST00000247020 CHGBP05060 677 aa16.97■□□□□ 0.31
SDF2-201ENST00000247020 SP8Q8IXZ3 490 aa16.97■□□□□ 0.31
SDF2-201ENST00000247020 CTNNA3Q9UI47 895 aa16.97■□□□□ 0.31
SDF2-201ENST00000247020 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
SDF2-201ENST00000247020 COL1A1P02452 1464 aaPredicted RBP16.96■□□□□ 0.31
SDF2-201ENST00000247020 DLEC1Q9Y238 1755 aa16.96■□□□□ 0.31
SDF2-201ENST00000247020 SLC16A10Q8TF71 515 aa16.96■□□□□ 0.31
SDF2-201ENST00000247020 MASTLQ96GX5 879 aa16.96■□□□□ 0.31
SDF2-201ENST00000247020 TTC14Q96N46 770 aa16.96■□□□□ 0.31
SDF2-201ENST00000247020 PUS7LQ9H0K6 701 aaKnown RBP16.96■□□□□ 0.31
SDF2-201ENST00000247020 ALDH8A1Q9H2A2 487 aaPredicted RBP16.96■□□□□ 0.31
SDF2-201ENST00000247020 CIZ1Q9ULV3 898 aaPredicted RBP16.96■□□□□ 0.31
SDF2-201ENST00000247020 CYP46A1Q9Y6A2 500 aa16.96■□□□□ 0.31
SDF2-201ENST00000247020 ZMYM6O95789 1325 aa16.96■□□□□ 0.31
SDF2-201ENST00000247020 ZNF532Q9HCE3 1301 aa16.96■□□□□ 0.31
SDF2-201ENST00000247020 GPAA1O43292 621 aa16.95■□□□□ 0.3
SDF2-201ENST00000247020 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
SDF2-201ENST00000247020 CASTP20810 708 aaKnown RBP16.95■□□□□ 0.3
SDF2-201ENST00000247020 VPS53Q5VIR6 699 aa16.95■□□□□ 0.3
SDF2-201ENST00000247020 ZNF804AQ7Z570 1209 aa16.95■□□□□ 0.3
SDF2-201ENST00000247020 WWC3Q9ULE0 1092 aa16.95■□□□□ 0.3
SDF2-201ENST00000247020 PPEF1O14829 653 aaPredicted RBP16.94■□□□□ 0.3
SDF2-201ENST00000247020 RUFY3Q7L099 469 aa16.94■□□□□ 0.3
SDF2-201ENST00000247020 ZGPATQ8N5A5 531 aaKnown RBP16.94■□□□□ 0.3
SDF2-201ENST00000247020 JAKMIP1Q96N16 626 aaKnown RBP16.94■□□□□ 0.3
SDF2-201ENST00000247020 GGA1Q9UJY5 639 aa16.94■□□□□ 0.3
SDF2-201ENST00000247020 ATP6V0A2Q9Y487 856 aa16.94■□□□□ 0.3
SDF2-201ENST00000247020 SALL1Q9NSC2 1324 aa16.94■□□□□ 0.3
SDF2-201ENST00000247020 HMGB1P09429 215 aaKnown RBP16.94■□□□□ 0.3
SDF2-201ENST00000247020 DDIT3P35638 169 aa16.94■□□□□ 0.3
SDF2-201ENST00000247020 GPSM2P81274 684 aa16.94■□□□□ 0.3
SDF2-201ENST00000247020 SLFNL1Q499Z3 407 aa16.94■□□□□ 0.3
SDF2-201ENST00000247020 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
SDF2-201ENST00000247020 SLKQ9H2G2 1235 aaPredicted RBP16.94■□□□□ 0.3
SDF2-201ENST00000247020 CHMP5Q9NZZ3 219 aa16.94■□□□□ 0.3
SDF2-201ENST00000247020 LRP2BPQ9P2M1 347 aa16.94■□□□□ 0.3
SDF2-201ENST00000247020 CYP21A2P08686 494 aa16.93■□□□□ 0.3
SDF2-201ENST00000247020 GNAT2P19087 354 aa16.93■□□□□ 0.3
SDF2-201ENST00000247020 CUL4AQ13619 759 aa16.93■□□□□ 0.3
SDF2-201ENST00000247020 ADCK5Q3MIX3 580 aa16.93■□□□□ 0.3
SDF2-201ENST00000247020 MSL1Q68DK7 614 aa16.93■□□□□ 0.3
SDF2-201ENST00000247020 STYK1Q6J9G0 422 aa16.93■□□□□ 0.3
SDF2-201ENST00000247020 BLOC1S2Q6QNY1 142 aa16.93■□□□□ 0.3
SDF2-201ENST00000247020 DEFB132Q7Z7B7 95 aa16.93■□□□□ 0.3
SDF2-201ENST00000247020 MAGEB6Q8N7X4 407 aa16.93■□□□□ 0.3
SDF2-201ENST00000247020 AIDAQ96BJ3 306 aa16.93■□□□□ 0.3
SDF2-201ENST00000247020 CWC22Q9HCG8 908 aaKnown RBP16.93■□□□□ 0.3
SDF2-201ENST00000247020 KIF13BQ9NQT8 1826 aa16.93■□□□□ 0.3
SDF2-201ENST00000247020 CHD4Q14839 1912 aa16.92■□□□□ 0.3
SDF2-201ENST00000247020 WTIPA6NIX2 430 aaPredicted RBP16.92■□□□□ 0.3
SDF2-201ENST00000247020 FRAT2O75474 233 aaPredicted RBP16.92■□□□□ 0.3
SDF2-201ENST00000247020 KLRK1P26718 216 aa16.92■□□□□ 0.3
SDF2-201ENST00000247020 ANKRD1Q15327 319 aa16.92■□□□□ 0.3
SDF2-201ENST00000247020 ALX1Q15699 326 aa16.92■□□□□ 0.3
SDF2-201ENST00000247020 TDRD7Q8NHU6 1098 aaKnown RBP16.92■□□□□ 0.3
SDF2-201ENST00000247020 INTS4Q96HW7 963 aaKnown RBP16.92■□□□□ 0.3
SDF2-201ENST00000247020 NSFL1CQ9UNZ2 370 aaKnown RBP16.92■□□□□ 0.3
SDF2-201ENST00000247020 UFL1O94874 794 aa16.91■□□□□ 0.3
SDF2-201ENST00000247020 SPTY2D1Q68D10 685 aaPredicted RBP16.91■□□□□ 0.3
SDF2-201ENST00000247020 WDR66Q8TBY9 1149 aa16.91■□□□□ 0.3
SDF2-201ENST00000247020 TMX3Q96JJ7 454 aa16.91■□□□□ 0.3
SDF2-201ENST00000247020 ZSCAN31Q96LW9 406 aaPredicted RBP16.91■□□□□ 0.3
SDF2-201ENST00000247020 PDRG1Q9NUG6 133 aa16.91■□□□□ 0.3
SDF2-201ENST00000247020 C10orf71Q711Q0 1435 aa16.91■□□□□ 0.3
SDF2-201ENST00000247020 H0YIN7 160 aa16.9■□□□□ 0.3
SDF2-201ENST00000247020 FOXP2O15409 715 aa16.9■□□□□ 0.3
SDF2-201ENST00000247020 RPS6KB1P23443 525 aa16.9■□□□□ 0.3
SDF2-201ENST00000247020 IMMTQ16891 758 aaKnown RBP16.9■□□□□ 0.3
SDF2-201ENST00000247020 TBC1D16Q8TBP0 767 aa16.9■□□□□ 0.3
SDF2-201ENST00000247020 NEK1Q96PY6 1258 aa16.9■□□□□ 0.3
SDF2-201ENST00000247020 STRBPQ96SI9 672 aaKnown RBP16.9■□□□□ 0.3
SDF2-201ENST00000247020 TMX4Q9H1E5 349 aaPredicted RBP16.9■□□□□ 0.3
SDF2-201ENST00000247020 IQSEC3Q9UPP2 1182 aaPredicted RBP16.9■□□□□ 0.3
SDF2-201ENST00000247020 LIMCH1Q9UPQ0 1083 aa16.9■□□□□ 0.3
SDF2-201ENST00000247020 TIAM2Q8IVF5 1701 aa16.9■□□□□ 0.3
SDF2-201ENST00000247020 IL1R1P14778 569 aa16.89■□□□□ 0.3
SDF2-201ENST00000247020 AK2P54819 239 aa16.89■□□□□ 0.3
SDF2-201ENST00000247020 TXNRD3Q86VQ6 643 aa16.89■□□□□ 0.3
SDF2-201ENST00000247020 RAI14Q9P0K7 980 aa16.89■□□□□ 0.3
SDF2-201ENST00000247020 ABCF2Q9UG63 623 aa16.89■□□□□ 0.3
SDF2-201ENST00000247020 PATL2C9JE40 543 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms