RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 PHF23Q9BUL5 403 aaPredicted RBP8.51□□□□□ -1.05
RIF1-201ENST00000243326 ATP8B2P98198 1209 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 RTN1Q16799 776 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 ZNF444Q8N0Y2 327 aaPredicted RBP8.51□□□□□ -1.05
RIF1-201ENST00000243326 E7EVH7 732 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 KCNG4Q8TDN1 519 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 XPO4Q9C0E2 1151 aaKnown RBP8.51□□□□□ -1.05
RIF1-201ENST00000243326 FAM114A2Q9NRY5 505 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.51□□□□□ -1.05
RIF1-201ENST00000243326 INPP5BP32019 993 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 LDHAL6AQ6ZMR3 332 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 SND1Q7KZF4 910 aaKnown RBP eCLIP8.51□□□□□ -1.05
RIF1-201ENST00000243326 PNMA8AQ86V59 439 aaPredicted RBP8.51□□□□□ -1.05
RIF1-201ENST00000243326 DCAF17Q5H9S7 520 aaPredicted RBP8.51□□□□□ -1.05
RIF1-201ENST00000243326 BICC1Q9H694 974 aaKnown RBP8.51□□□□□ -1.05
RIF1-201ENST00000243326 SYNJ2O15056 1496 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 PLB1Q6P1J6 1458 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 KNL1Q8NG31 2342 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 TMEM266Q2M3C6 531 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 IQCA1Q86XH1 822 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 LEO1Q8WVC0 666 aaPredicted RBP8.51□□□□□ -1.05
RIF1-201ENST00000243326 ANKRD18BA2A2Z9 1011 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 LRRC43Q8N309 656 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 CEBPAP49715 358 aaPredicted RBP8.5□□□□□ -1.05
RIF1-201ENST00000243326 ARID5BQ14865 1188 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 MAEAQ7L5Y9 396 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 TAB3Q8N5C8 712 aaPredicted RBP8.5□□□□□ -1.05
RIF1-201ENST00000243326 NAPGQ99747 312 aaPredicted RBP8.5□□□□□ -1.05
RIF1-201ENST00000243326 ZBTB40Q9NUA8 1239 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 CAPN7Q9Y6W3 813 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 RPRD2Q5VT52 1461 aaKnown RBP8.5□□□□□ -1.05
RIF1-201ENST00000243326 ZSCAN26Q16670 478 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 CCDC24Q8N4L8 307 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 FTOQ9C0B1 505 aaKnown RBP eCLIP8.5□□□□□ -1.05
RIF1-201ENST00000243326 STX8Q9UNK0 236 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 KCNJ14Q9UNX9 436 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 CYLC1P35663 651 aaPredicted RBP8.5□□□□□ -1.05
RIF1-201ENST00000243326 PEX19P40855 299 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 EIF6P56537 245 aaKnown RBP8.5□□□□□ -1.05
RIF1-201ENST00000243326 E2F5Q15329 346 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 LMBR1LQ6UX01 489 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 VPS36Q86VN1 386 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 PROCA1Q8NCQ7 364 aaPredicted RBP8.5□□□□□ -1.05
RIF1-201ENST00000243326 ASXL1Q8IXJ9 1541 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 SLC27A2O14975 620 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 OPA1O60313 960 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 MAP3K12Q12852 859 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 GRIPAP1Q4V328 841 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 DDX17Q92841 729 aaKnown RBP8.5□□□□□ -1.05
RIF1-201ENST00000243326 FERMT2Q96AC1 680 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 PDE11AQ9HCR9 933 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 CALM1P0DP23 149 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 CALM2P0DP24 149 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 CALM3P0DP25 149 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 MYO10Q9HD67 2058 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 ABCC11Q96J66 1382 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 WWC2Q6AWC2 1192 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 IGSF22Q8N9C0 903 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 ZSCAN16Q9H4T2 348 aaPredicted RBP8.5□□□□□ -1.05
RIF1-201ENST00000243326 E2F4Q16254 413 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 POLKQ9UBT6 870 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 TTF1Q15361 905 aaPredicted RBP8.5□□□□□ -1.05
RIF1-201ENST00000243326 TCP11L1Q9NUJ3 509 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 ARL1P40616 181 aaPredicted RBP8.5□□□□□ -1.05
RIF1-201ENST00000243326 BICD1Q96G01 975 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 THOC2Q8NI27 1593 aaKnown RBP8.5□□□□□ -1.05
RIF1-201ENST00000243326 PRDM1O75626 825 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 DMTNQ08495 405 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 MCMDC2Q4G0Z9 681 aa8.5□□□□□ -1.05
RIF1-201ENST00000243326 TXNDC9O14530 226 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 NDUFAB1O14561 156 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 DIXDC1Q155Q3 683 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 CEP85LQ5SZL2 805 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 CAPN12Q6ZSI9 719 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 PTPRCP08575 1304 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 TROQ12816 1431 aaPredicted RBP8.49□□□□□ -1.05
RIF1-201ENST00000243326 AKR1B15C9JRZ8 316 aaPredicted RBP8.49□□□□□ -1.05
RIF1-201ENST00000243326 ADAMTS2O95450 1211 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 ADCY1Q08828 1119 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 PAG1Q9NWQ8 432 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 B4E1Z4 1266 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 TACC1O75410 805 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 FSD2A1L4K1 749 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 VAMP4O75379 141 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 PCK1P35558 622 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 SPAG5Q96R06 1193 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 AKAP2Q9Y2D5 859 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 USH1CQ9Y6N9 552 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 CTDSPL2Q05D32 466 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 KCTD16Q68DU8 428 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 PSMC4P43686 418 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 FNBP4Q8N3X1 1017 aaPredicted RBP8.49□□□□□ -1.05
RIF1-201ENST00000243326 NR1I2O75469 434 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 SLC9C2Q5TAH2 1124 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 HMGB1P09429 215 aaKnown RBP8.49□□□□□ -1.05
RIF1-201ENST00000243326 SESN3P58005 492 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 LLGL1Q15334 1064 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 PSMD6Q15008 389 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 TMOD3Q9NYL9 352 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 EFCAB5A4FU69 1503 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms